Difference between revisions of "Os05g0591400"

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(Created page with "{{JaponicaGene| GeneName = Os05g0591400| Description = Heat shock protein Hsp70 family protein| Version = NM_001063024.1 GI:115465778 GeneID:4339788| Length = 1595 bp| De...")
 
(Annotated Information)
 
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{{JaponicaGene|
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The rice '''''Os05g0591400''''' was reported as '''''OsEBS''''' in 2014 <ref name="ref1" /> by researchers from Korea and Japan.  
GeneName = Os05g0591400|
 
Description = Heat shock protein Hsp70 family protein|
 
Version = NM_001063024.1 GI:115465778 GeneID:4339788|
 
Length = 1595 bp|
 
Definition = Oryza sativa Japonica Group Os05g0591400, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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[[File:Os05g0591400.png|right|thumb|327px|'''Figure 3.''' ''Performance of OsEBS-transgenic line grown under natural long-day conditions..<ref name="ref1" />.'']]
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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===Function===
            clade; Ehrhartoideae; Oryzeae; Oryza.
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* The rice '''''OsEBS''''' is a newly identified gene which can increase plant height, leaf size and spikelet number per panicle, leading to an increase in total grain yield per plant.
|
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Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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===Phenotypic analysis===
AP = Chromosome 5:29537139..29538733|
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* OsEBS-transgenic plants and BIL112 (collectively referred to as OsEBS-positive plants) showed significantly different phenotypes to that of the control Guichao2. There were no obvious phenotypic differences at the seedling stage; however, the differences became evident as the plants grew. At the ten-leaf stage, transgenic lines showed greater plant height than control plants (Figure 3a).  
CDS = 29537171..29537210,29537314..29538587|
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* At the flowering stage, the heading time was delayed by approximately 7 days in OsEBS-positive plants. BIL112 and transgenic plants had greater biomass than Guichao2 at maturity (Figure 3b).  
GCID = <gbrowseImage1>
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* The OsEBS-positive plants had larger leaves, greater plant height, longer internodes, greater culm diameter and more spikelets on the main panicle (Figure 3c–e).
name=NC_008398:29537139..29538733
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source=RiceChromosome05
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preset=GeneLocation
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</gbrowseImage1>|
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You can also add sub-section(s) at will.
GSID = <gbrowseImage2>
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name=NC_008398:29537139..29538733
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==Labs working on this gene==
source=RiceChromosome05
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* State Key Laboratory of Genetic Engineering, Institute of Genetics, Institute of Plant Biology, School of Life Sciences, Fudan University, Shanghai, China
preset=GeneLocation
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* The Department of Plant Genetics and Breeding, China Agricultural University, Beijing, China
</gbrowseImage2>|
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* Department of Biology, The Pennsylvania State University, University Park, PA, USA
CDNA = <cdnaseq>atggcgcgtcgtcgtcttgtcctgctgcttctcatcattgccgcggcgggtgcggcggcgtttgggatccgacgagatgcgcccaaggcatactgcttctacggcattgagtggacgggagtgccttacttgccgggcaccgccgccgccatttatatcggcaacaccaactcctgcatcgccggctaccactcgccgccggacacggccacctcctaccggttctgcatcccctcctgggtggccttcaccgccaacgccaccaccctctgcggccaacccgccgtcgaccactccgccgccatctccggcttcaagcgactcatcggcctacagccgggagatcctcacgccaagagggtggcgcagattgcgccctacaagctgggggaaaagatcgggagatgcagcatccaggtccaactggacgatggcgccaagtgccgtgtggaggatttccttcccgaggatgtcgccggcatcctcatcgcccacctcaagagcacggcggaggcgcacctgggccaccgcatcgacaacgccgtcgtcaccgtccccggccacttcaatggaaaccaaaggcaagaggtcagctctggttccaccgagtacggcggcttccgctacgtctccgtcgtcgacgagcaggtcgccgcggccgccgcgcacggcctccacgaggaccggggcgacggcaaggtcatcctcgtcttccacctcggcggccgcaccgcccacgccaccaagttcgtcatccgggacggcacacccagcctcatcgcgctgcgccatgaccccttcctcggcggggacgacttcaccgccagggtggtggatcacatggccgacctcatcaaggacaagcacggcggcagggacgtccgcgccgacgccgccgcgctccgcaggctgacggcggagtgcgagcgcgccaagaaggcgttgagctaccagcaagagacggtggtgaccatgcgcttggacgacgacgacgacttgttctcggagcctctcacgcgcagcaagctggaggagctgatcggcgacctggtgggcagagcggtggacctggtggagagctgcgacgctagtggcggcgacgttgtgggcgtcgacgagatcctgctggtgggtggaagcacgaggatccccatggtccgcgacctcgtcaaggactacttccatggcaaggaggccagcaacgagaagggcgtggagcctgacgaggcggtcattcgcggcgcccttcttctttcccacccacaccaggctaggtacctcgacccttgctacgactactggcattcccgctaa</cdnaseq>|
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AA = <aaseq>MARRRLVLLLLIIAAAGAAAFGIRRDAPKAYCFYGIEWTGVPYL                    PGTAAAIYIGNTNSCIAGYHSPPDTATSYRFCIPSWVAFTANATTLCGQPAVDHSAAI                    SGFKRLIGLQPGDPHAKRVAQIAPYKLGEKIGRCSIQVQLDDGAKCRVEDFLPEDVAG                    ILIAHLKSTAEAHLGHRIDNAVVTVPGHFNGNQRQEVSSGSTEYGGFRYVSVVDEQVA                    AAAAHGLHEDRGDGKVILVFHLGGRTAHATKFVIRDGTPSLIALRHDPFLGGDDFTAR                    VVDHMADLIKDKHGGRDVRADAAALRRLTAECERAKKALSYQQETVVTMRLDDDDDLF                    SEPLTRSKLEELIGDLVGRAVDLVESCDASGGDVVGVDEILLVGGSTRIPMVRDLVKD                    YFHGKEASNEKGVEPDEAVIRGALLLSHPHQARYLDPCYDYWHSR</aaseq>|
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==References==
DNA = <dnaseqindica>33..72#176..1449#aagacgccattggagtccaattaacttgaataatggcgcgtcgtcgtcttgtcctgctgcttctcatcattggtacgttattatactcatggagtaggatggttaatttgttgatttgcagttagcggaggagtaattaattaattatgttattaatcttgtgttggcatggcagccgcggcgggtgcggcggcgtttgggatccgacgagatgcgcccaaggcatactgcttctacggcattgagtggacgggagtgccttacttgccgggcaccgccgccgccatttatatcggcaacaccaactcctgcatcgccggctaccactcgccgccggacacggccacctcctaccggttctgcatcccctcctgggtggccttcaccgccaacgccaccaccctctgcggccaacccgccgtcgaccactccgccgccatctccggcttcaagcgactcatcggcctacagccgggagatcctcacgccaagagggtggcgcagattgcgccctacaagctgggggaaaagatcgggagatgcagcatccaggtccaactggacgatggcgccaagtgccgtgtggaggatttccttcccgaggatgtcgccggcatcctcatcgcccacctcaagagcacggcggaggcgcacctgggccaccgcatcgacaacgccgtcgtcaccgtccccggccacttcaatggaaaccaaaggcaagaggtcagctctggttccaccgagtacggcggcttccgctacgtctccgtcgtcgacgagcaggtcgccgcggccgccgcgcacggcctccacgaggaccggggcgacggcaaggtcatcctcgtcttccacctcggcggccgcaccgcccacgccaccaagttcgtcatccgggacggcacacccagcctcatcgcgctgcgccatgaccccttcctcggcggggacgacttcaccgccagggtggtggatcacatggccgacctcatcaaggacaagcacggcggcagggacgtccgcgccgacgccgccgcgctccgcaggctgacggcggagtgcgagcgcgccaagaaggcgttgagctaccagcaagagacggtggtgaccatgcgcttggacgacgacgacgacttgttctcggagcctctcacgcgcagcaagctggaggagctgatcggcgacctggtgggcagagcggtggacctggtggagagctgcgacgctagtggcggcgacgttgtgggcgtcgacgagatcctgctggtgggtggaagcacgaggatccccatggtccgcgacctcgtcaaggactacttccatggcaaggaggccagcaacgagaagggcgtggagcctgacgaggcggtcattcgcggcgcccttcttctttcccacccacaccaggctaggtacctcgacccttgctacgactactggcattcccgctaatgctaatgttcctcctcctcctcatgcctcttactattagcttgagcaatttcacatccaatattggctgcctatatatccctcatgcatgttaactgtcttttagatcaacatcatcgaatgatgaactactgtctattgtgttt</dnaseqindica>|
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<references>
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063024.1 RefSeq:Os05g0591400]|
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* <ref name="ref1">
}}
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Dong X, Wang X, Zhang L, Yang Z, Xin X, Wu S, Sun C, Liu J, Yang J, Luo X.
[[Category:Genes]]
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Identification and characterization of OsEBS, a gene involved in enhanced plant
[[Category:Japonica mRNA]]
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biomass and spikelet number in rice. Plant Biotechnol J. 2013 Dec;11(9):1044-57.  
[[Category:Oryza Sativa Japonica Group]]
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doi: 10.1111/pbi.12097. Epub 2013 Aug 7. PubMed PMID: 23924074.
[[Category:Japonica Genes]]
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</ref>
[[Category:Japonica Chromosome 5]]
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</references>
[[Category:Chromosome 5]]
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==Structured Information==
 +
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]

Latest revision as of 15:58, 9 October 2016

The rice Os05g0591400 was reported as OsEBS in 2014 [1] by researchers from Korea and Japan.

Annotated Information

Figure 3. Performance of OsEBS-transgenic line grown under natural long-day conditions..[1].

Function

  • The rice OsEBS is a newly identified gene which can increase plant height, leaf size and spikelet number per panicle, leading to an increase in total grain yield per plant.

Phenotypic analysis

  • OsEBS-transgenic plants and BIL112 (collectively referred to as OsEBS-positive plants) showed significantly different phenotypes to that of the control Guichao2. There were no obvious phenotypic differences at the seedling stage; however, the differences became evident as the plants grew. At the ten-leaf stage, transgenic lines showed greater plant height than control plants (Figure 3a).
  • At the flowering stage, the heading time was delayed by approximately 7 days in OsEBS-positive plants. BIL112 and transgenic plants had greater biomass than Guichao2 at maturity (Figure 3b).
  • The OsEBS-positive plants had larger leaves, greater plant height, longer internodes, greater culm diameter and more spikelets on the main panicle (Figure 3c–e).


You can also add sub-section(s) at will.

Labs working on this gene

  • State Key Laboratory of Genetic Engineering, Institute of Genetics, Institute of Plant Biology, School of Life Sciences, Fudan University, Shanghai, China
  • The Department of Plant Genetics and Breeding, China Agricultural University, Beijing, China
  • Department of Biology, The Pennsylvania State University, University Park, PA, USA

References

  1. 1.0 1.1 Dong X, Wang X, Zhang L, Yang Z, Xin X, Wu S, Sun C, Liu J, Yang J, Luo X. Identification and characterization of OsEBS, a gene involved in enhanced plant biomass and spikelet number in rice. Plant Biotechnol J. 2013 Dec;11(9):1044-57. doi: 10.1111/pbi.12097. Epub 2013 Aug 7. PubMed PMID: 23924074.

Structured Information