Difference between revisions of "Os05g0591400"

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(Created page with "{{JaponicaGene| GeneName = Os05g0591400| Description = Heat shock protein Hsp70 family protein| Version = NM_001063024.1 GI:115465778 GeneID:4339788| Length = 1595 bp| De...")
 
(→‎Annotated Information)
 
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{{JaponicaGene|
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The rice '''''Os05g0591400''''' was reported as '''''OsEBS''''' in 2014 <ref name="ref1" /> by researchers from Korea and Japan.  
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GeneName = Os05g0591400|
 
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Description = Heat shock protein Hsp70 family protein|
 
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Version = NM_001063024.1 GI:115465778 GeneID:4339788|
 
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Length = 1595 bp|
 
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Definition = Oryza sativa Japonica Group Os05g0591400, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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[[File:Os05g0591400.png|right|thumb|327px|'''Figure 3.''' ''Performance of OsEBS-transgenic line grown under natural long-day conditions..<ref name="ref1" />.'']]
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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===Function===
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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* The rice '''''OsEBS''''' is a newly identified gene which can increase plant height, leaf size and spikelet number per panicle, leading to an increase in total grain yield per plant.
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|
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Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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===Phenotypic analysis===
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AP = Chromosome 5:29537139..29538733|
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* OsEBS-transgenic plants and BIL112 (collectively referred to as OsEBS-positive plants) showed significantly different phenotypes to that of the control Guichao2. There were no obvious phenotypic differences at the seedling stage; however, the differences became evident as the plants grew. At the ten-leaf stage, transgenic lines showed greater plant height than control plants (Figure 3a).  
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CDS = 29537171..29537210,29537314..29538587|
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* At the flowering stage, the heading time was delayed by approximately 7 days in OsEBS-positive plants. BIL112 and transgenic plants had greater biomass than Guichao2 at maturity (Figure 3b).  
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GCID = <gbrowseImage1>
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* The OsEBS-positive plants had larger leaves, greater plant height, longer internodes, greater culm diameter and more spikelets on the main panicle (Figure 3c–e).
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name=NC_008398:29537139..29538733
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source=RiceChromosome05
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preset=GeneLocation
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</gbrowseImage1>|
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You can also add sub-section(s) at will.
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GSID = <gbrowseImage2>
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name=NC_008398:29537139..29538733
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==Labs working on this gene==
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source=RiceChromosome05
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* State Key Laboratory of Genetic Engineering, Institute of Genetics, Institute of Plant Biology, School of Life Sciences, Fudan University, Shanghai, China
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preset=GeneLocation
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* The Department of Plant Genetics and Breeding, China Agricultural University, Beijing, China
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</gbrowseImage2>|
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* Department of Biology, The Pennsylvania State University, University Park, PA, USA
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CDNA = <cdnaseq>atggcgcgtcgtcgtcttgtcctgctgcttctcatcattgccgcggcgggtgcggcggcgtttgggatccgacgagatgcgcccaaggcatactgcttctacggcattgagtggacgggagtgccttacttgccgggcaccgccgccgccatttatatcggcaacaccaactcctgcatcgccggctaccactcgccgccggacacggccacctcctaccggttctgcatcccctcctgggtggccttcaccgccaacgccaccaccctctgcggccaacccgccgtcgaccactccgccgccatctccggcttcaagcgactcatcggcctacagccgggagatcctcacgccaagagggtggcgcagattgcgccctacaagctgggggaaaagatcgggagatgcagcatccaggtccaactggacgatggcgccaagtgccgtgtggaggatttccttcccgaggatgtcgccggcatcctcatcgcccacctcaagagcacggcggaggcgcacctgggccaccgcatcgacaacgccgtcgtcaccgtccccggccacttcaatggaaaccaaaggcaagaggtcagctctggttccaccgagtacggcggcttccgctacgtctccgtcgtcgacgagcaggtcgccgcggccgccgcgcacggcctccacgaggaccggggcgacggcaaggtcatcctcgtcttccacctcggcggccgcaccgcccacgccaccaagttcgtcatccgggacggcacacccagcctcatcgcgctgcgccatgaccccttcctcggcggggacgacttcaccgccagggtggtggatcacatggccgacctcatcaaggacaagcacggcggcagggacgtccgcgccgacgccgccgcgctccgcaggctgacggcggagtgcgagcgcgccaagaaggcgttgagctaccagcaagagacggtggtgaccatgcgcttggacgacgacgacgacttgttctcggagcctctcacgcgcagcaagctggaggagctgatcggcgacctggtgggcagagcggtggacctggtggagagctgcgacgctagtggcggcgacgttgtgggcgtcgacgagatcctgctggtgggtggaagcacgaggatccccatggtccgcgacctcgtcaaggactacttccatggcaaggaggccagcaacgagaagggcgtggagcctgacgaggcggtcattcgcggcgcccttcttctttcccacccacaccaggctaggtacctcgacccttgctacgactactggcattcccgctaa</cdnaseq>|
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AA = <aaseq>MARRRLVLLLLIIAAAGAAAFGIRRDAPKAYCFYGIEWTGVPYL                    PGTAAAIYIGNTNSCIAGYHSPPDTATSYRFCIPSWVAFTANATTLCGQPAVDHSAAI                    SGFKRLIGLQPGDPHAKRVAQIAPYKLGEKIGRCSIQVQLDDGAKCRVEDFLPEDVAG                    ILIAHLKSTAEAHLGHRIDNAVVTVPGHFNGNQRQEVSSGSTEYGGFRYVSVVDEQVA                    AAAAHGLHEDRGDGKVILVFHLGGRTAHATKFVIRDGTPSLIALRHDPFLGGDDFTAR                    VVDHMADLIKDKHGGRDVRADAAALRRLTAECERAKKALSYQQETVVTMRLDDDDDLF                    SEPLTRSKLEELIGDLVGRAVDLVESCDASGGDVVGVDEILLVGGSTRIPMVRDLVKD                    YFHGKEASNEKGVEPDEAVIRGALLLSHPHQARYLDPCYDYWHSR</aaseq>|
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==References==
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DNA = <dnaseqindica>33..72#176..1449#aagacgccattggagtccaattaacttgaataatggcgcgtcgtcgtcttgtcctgctgcttctcatcattggtacgttattatactcatggagtaggatggttaatttgttgatttgcagttagcggaggagtaattaattaattatgttattaatcttgtgttggcatggcagccgcggcgggtgcggcggcgtttgggatccgacgagatgcgcccaaggcatactgcttctacggcattgagtggacgggagtgccttacttgccgggcaccgccgccgccatttatatcggcaacaccaactcctgcatcgccggctaccactcgccgccggacacggccacctcctaccggttctgcatcccctcctgggtggccttcaccgccaacgccaccaccctctgcggccaacccgccgtcgaccactccgccgccatctccggcttcaagcgactcatcggcctacagccgggagatcctcacgccaagagggtggcgcagattgcgccctacaagctgggggaaaagatcgggagatgcagcatccaggtccaactggacgatggcgccaagtgccgtgtggaggatttccttcccgaggatgtcgccggcatcctcatcgcccacctcaagagcacggcggaggcgcacctgggccaccgcatcgacaacgccgtcgtcaccgtccccggccacttcaatggaaaccaaaggcaagaggtcagctctggttccaccgagtacggcggcttccgctacgtctccgtcgtcgacgagcaggtcgccgcggccgccgcgcacggcctccacgaggaccggggcgacggcaaggtcatcctcgtcttccacctcggcggccgcaccgcccacgccaccaagttcgtcatccgggacggcacacccagcctcatcgcgctgcgccatgaccccttcctcggcggggacgacttcaccgccagggtggtggatcacatggccgacctcatcaaggacaagcacggcggcagggacgtccgcgccgacgccgccgcgctccgcaggctgacggcggagtgcgagcgcgccaagaaggcgttgagctaccagcaagagacggtggtgaccatgcgcttggacgacgacgacgacttgttctcggagcctctcacgcgcagcaagctggaggagctgatcggcgacctggtgggcagagcggtggacctggtggagagctgcgacgctagtggcggcgacgttgtgggcgtcgacgagatcctgctggtgggtggaagcacgaggatccccatggtccgcgacctcgtcaaggactacttccatggcaaggaggccagcaacgagaagggcgtggagcctgacgaggcggtcattcgcggcgcccttcttctttcccacccacaccaggctaggtacctcgacccttgctacgactactggcattcccgctaatgctaatgttcctcctcctcctcatgcctcttactattagcttgagcaatttcacatccaatattggctgcctatatatccctcatgcatgttaactgtcttttagatcaacatcatcgaatgatgaactactgtctattgtgttt</dnaseqindica>|
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<references>
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063024.1 RefSeq:Os05g0591400]|
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* <ref name="ref1">
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}}
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Dong X, Wang X, Zhang L, Yang Z, Xin X, Wu S, Sun C, Liu J, Yang J, Luo X.
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[[Category:Genes]]
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Identification and characterization of OsEBS, a gene involved in enhanced plant
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[[Category:Japonica mRNA]]
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biomass and spikelet number in rice. Plant Biotechnol J. 2013 Dec;11(9):1044-57.  
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[[Category:Oryza Sativa Japonica Group]]
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doi: 10.1111/pbi.12097. Epub 2013 Aug 7. PubMed PMID: 23924074.
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[[Category:Japonica Genes]]
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</ref>
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[[Category:Japonica Chromosome 5]]
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</references>
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[[Category:Chromosome 5]]
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==Structured Information==
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]

Latest revision as of 15:58, 9 October 2016

The rice Os05g0591400 was reported as OsEBS in 2014 [1] by researchers from Korea and Japan.

Annotated Information

Figure 3. Performance of OsEBS-transgenic line grown under natural long-day conditions..[1].

Function

  • The rice OsEBS is a newly identified gene which can increase plant height, leaf size and spikelet number per panicle, leading to an increase in total grain yield per plant.

Phenotypic analysis

  • OsEBS-transgenic plants and BIL112 (collectively referred to as OsEBS-positive plants) showed significantly different phenotypes to that of the control Guichao2. There were no obvious phenotypic differences at the seedling stage; however, the differences became evident as the plants grew. At the ten-leaf stage, transgenic lines showed greater plant height than control plants (Figure 3a).
  • At the flowering stage, the heading time was delayed by approximately 7 days in OsEBS-positive plants. BIL112 and transgenic plants had greater biomass than Guichao2 at maturity (Figure 3b).
  • The OsEBS-positive plants had larger leaves, greater plant height, longer internodes, greater culm diameter and more spikelets on the main panicle (Figure 3c–e).


You can also add sub-section(s) at will.

Labs working on this gene

  • State Key Laboratory of Genetic Engineering, Institute of Genetics, Institute of Plant Biology, School of Life Sciences, Fudan University, Shanghai, China
  • The Department of Plant Genetics and Breeding, China Agricultural University, Beijing, China
  • Department of Biology, The Pennsylvania State University, University Park, PA, USA

References

  1. ↑ 1.0 1.1 Dong X, Wang X, Zhang L, Yang Z, Xin X, Wu S, Sun C, Liu J, Yang J, Luo X. Identification and characterization of OsEBS, a gene involved in enhanced plant biomass and spikelet number in rice. Plant Biotechnol J. 2013 Dec;11(9):1044-57. doi: 10.1111/pbi.12097. Epub 2013 Aug 7. PubMed PMID: 23924074.

Structured Information