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| − | {{JaponicaGene|
| + | The rice '''''Os11g0195500''''' was reported as '''''OsPAD4''''' in 2014 <ref name="ref1" /> by researchers from China. |
| − | GeneName = Os11g0195500|
| |
| − | Description = Lipase, class 3 family protein|
| |
| − | Version = NM_001073956.2 GI:297611395 GeneID:4349988|
| |
| − | Length = 3651 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os11g0195500, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | [[File:74-Os11g0195500.png|right|thumb|327px|'''Figure 1.''' ''Subcellular Localization of OsPAD4.<ref name="ref1" />.'']] |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | ===Gene Symbol=== |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | *'''''Os11g0195500''''' '''''<=>''''' '''''OsPAD4''''','''''PAD4''''' |
| − | |
| + | ===Function=== |
| − | Chromosome = [[:category:Japonica Chromosome 11|Chromosome 11]]|
| + | * '''''OsPAD4''''' plays an important role in wound-induced systemic resistance, whereas AtPAD4 mediates systemic acquired resistance. |
| − | AP = Chromosome 11:4768854..4772504|
| + | * '''''OsPAD4'''''-involved defense signaling against Xoo is JA-dependent, but AtPAD4-involved defense signaling against biotrophic pathogens is sali- cylic acid-dependent. |
| − | CDS = 4768854..4768949,4770641..4771842,4771928..4772294|
| + | * '''''OsPAD4''''' is required for the accumulation of terpenoid-type phytoalexin MOA in rice-bacterium interactions, but AtPAD4-mediated resistance is associated with the accumulation of indole-type phytoalexin camalexin. |
| − | GCID = <gbrowseImage1>
| + | |
| − | name=NC_008404:4768854..4772504
| + | ===Phenotypic analysis=== |
| − | source=RiceChromosome11
| + | * Suppression of OsPAD4 by RNA interference (RNAi) increased rice susceptibility to the biotrophic pathogen Xanthomonas oryzae pv. oryzae (Xoo), which causes bacteria blight disease in local tissue. |
| − | preset=GeneLocation
| + | * OsPAD4-RNAi plants also show compromised wound-induced systemic resistance to Xoo. |
| − | </gbrowseImage1>|
| + | * The increased susceptibility to Xoo was associated with reduced accumulation of jasmonic acid (JA) and phytoalexin momilactone A (MOA). |
| − | GSID = <gbrowseImage2>
| + | * Exogenous application of JA complemented the phenotype of OsPAD4-RNAi plants in response to Xoo. |
| − | name=NC_008404:4768854..4772504
| + | |
| − | source=RiceChromosome11
| + | ===Subcellular localization=== |
| − | preset=GeneLocation
| + | * '''''OsPAD4''''' encodes a plasma membrane protein |
| − | </gbrowseImage2>| | + | |
| − | CDNA = <cdnaseq>gccgccgagccggaggacgccggcggggagccggtcgccgtgcaggcgctggcgctgcaggggttcttgaggctgtgcagatcccctgaattccaggtgctgctgaaccagatcagaggcaaggcagtagtgttcactggccactccctcggtggtgccattgctgcccttgtggcgctgcactacctttgcacatcatcgtcaagctcagcatttgcccctgctcctccggtgctttgtgtcacattcgggagcccgctgcttggcaatcaggccctgtctagggctatcctgcgtgagcggtgggccggcaacttctgccatgtggtctcacagcatgatgttgtcccaaggctcctcttctgcccactcaatgtcatccctgtgcacattgttgttggtatgcagctgcaccagttgccggtgcgcgcgcgccgtgcagccggtgtggtggccacggtcactgcccgcatggctgacaccaaccaggagtcgctgcggcagctgatccaagagcacgccggtgaggcagcaattgagcagaagcttgctgctccggaaatacccagtgggagcccataccggccttttggggcgtatgtcctgtgctctccggatggtgcggcgtgtgtcgacaatccaacagcagcggttcagatgctatatgcaacatttgctgcaaggcgtgctccagagacaggcgcggtgccacctgaggctgcacactcctgctacggtgacctcgtgctgagcatgccgcaccacttgctgctcaagaggcgccttggtgccacagtcaccgcacctgccgcgtccaactacgacgtcggcatctccattgcactggaggcatcaggtatcaccggtgaagctacagaggcagcaccggcacggcagtggctgaagacgtcgaagcgcgtgggccggagcccgagcctgaactgtgcgagcctcgcaacgcggttgggacggatcacgccgtgccgagcgcagatcgagtggtacaaggcattgttcgatgccaacaccgggtattacgacgcattcaagcagcggctatcacctaagaagttcagcaaggccaacatgtaccgcatcaagctcgcacagttctgggatggcgtcctctccatgcttgacaccagccagctcccctacgacttccaccgccgtgccaagtgggtcaacgctgcccacttctaccagctccttgttgagccacttgacattgccgactaccaccgaaacaacctacaccgcacacgcggctcttacatcacccatggccgggagagaaggtatgagctgttcgacaagtggtggaaacagaagggctgcacagatcccagcactggtgacacctctgccaccacgacagcgaggaggagcaagttcgctgggctaacgcaggacccgtgcttctgggcgagggtggaggaagcgcgcgagcagacagagagtgccaagagcgaacgcgacatgacatcgctggcgaggatgctggaggacttgcacaagtttgagcgccattccagcgagctggtggagaacaaggaggtctccattgatgtcgttgcgccacagtcgagctactccctgtgggtgaaggagtggaatgagctcaagctccgggaagaagttaggacaatattgtttcaattttga</cdnaseq>|
| + | You can also add sub-section(s) at will. |
| − | AA = <aaseq>AAEPEDAGGEPVAVQALALQGFLRLCRSPEFQVLLNQIRGKAVV FTGHSLGGAIAALVALHYLCTSSSSSAFAPAPPVLCVTFGSPLLGNQALSRAILRERW AGNFCHVVSQHDVVPRLLFCPLNVIPVHIVVGMQLHQLPVRARRAAGVVATVTARMAD TNQESLRQLIQEHAGEAAIEQKLAAPEIPSGSPYRPFGAYVLCSPDGAACVDNPTAAV QMLYATFAARRAPETGAVPPEAAHSCYGDLVLSMPHHLLLKRRLGATVTAPAASNYDV GISIALEASGITGEATEAAPARQWLKTSKRVGRSPSLNCASLATRLGRITPCRAQIEW YKALFDANTGYYDAFKQRLSPKKFSKANMYRIKLAQFWDGVLSMLDTSQLPYDFHRRA KWVNAAHFYQLLVEPLDIADYHRNNLHRTRGSYITHGRERRYELFDKWWKQKGCTDPS TGDTSATTTARRSKFAGLTQDPCFWARVEEAREQTESAKSERDMTSLARMLEDLHKFE RHSSELVENKEVSIDVVAPQSSYSLWVKEWNELKLREEVRTILFQF</aaseq>|
| + | |
| − | DNA = <dnaseqindica>1..96#1788..2989#3075..3441#gccgccgagccggaggacgccggcggggagccggtcgccgtgcaggcgctggcgctgcaggggttcttgaggctgtgcagatcccctgaattccaggtaattgaccaattagctgaaaatatctcgaactaatcgccccccatctaattgcgcacttaagctcgctaattacgcctcctgattttagttttcgtctaggatgatttgacattttttcttttgagttattttgggtgcaagttatggtgatgttgatgtgcctgtctctagttggttgatatgtcattatgttcagacttcaacatatgaggcttgagggagttcgtactgtgatttttttttgttttattattgtaaggtcaatgattctgtttatgcgataactaatttacgagtctaatttggcaaggaatttcaataacattttgtggaattcaaacaataataactggagtaatcttcagtgaaaataatgataatggttgctgtgccattactaccatgtgaagattgagtgctctccttaagctagtttggaaggctgtatttttttttctgtttgttgttagaattgaactgatttctttcaaattgcagtgaaattcgcacattccttattctgcagttttttctctcctgattcgtgtattgccttctgaagccgtgtctatcttcctctctgttatcaatttgtttgattaaattggtacctttgacagtagagatttatatgcacgagtttatcttggagcttataggacgtgtacatgtgttgtaatgtgtacaatccctatcaaacttggcggccaacccagagcacagatgctatgcacctgtctttttgtgtcaattgaaaccaaaaagtacggcacaaatggcacattggcacgtttggcagcacaccgaaatgtttttcttgctcttgctcttttgttgtcactttcattttgatccatttgtggtggcccatgtgtgacagaggatgattaggcgtgctgaatacaatgcatgattgagagaatgacccctggcaacactatgtgggtagggatctgaatataatgtttttttggctgtctggatctgaacaaattcattgctggcatgtgaaaaatggcgatccatgatgtgtcattatcttcagatgtgaataataaaaggtttgagtattgatgaatggaatctgaagtatggacatagttgatttttggatggtaatttagatttaagcctgcttttggtatatgtacttttcctgtgcatctcagagataaacaaggatatgcaagaaacttacaatatactgagcttagttatttcggatgattcttgaattctttaaagtttttagttggctgtcagacatgaccttcattccactctttgaatataaactgcagattggttttttgaggaaaaataaactgcagattggttttttgaggaaaaataaactgcagattggtaacttcagcatttgttgatcttttctatcatgtttcaccctgtctccatccggtgttatatttttctagtagtatttgtgtttcataatcgactatgtggcctattcttgttgacaaatcttatcttcatttccttgatgtttttgttgagccatcaaaggtgttaatgtccacagcttgtcaatttagtctgttcgattatacagttaatgcttctcttatactcatgaatcaaatctatcttgaggctgcaattatttttgagactaggaaaactgatcatatcacttactaattgcattgtgtcggttaacactgcaggtgctgctgaaccagatcagaggcaaggcagtagtgttcactggccactccctcggtggtgccattgctgcccttgtggcgctgcactacctttgcacatcatcgtcaagctcagcatttgcccctgctcctccggtgctttgtgtcacattcgggagcccgctgcttggcaatcaggccctgtctagggctatcctgcgtgagcggtgggccggcaacttctgccatgtggtctcacagcatgatgttgtcccaaggctcctcttctgcccactcaatgtcatccctgtgcacattgttgttggtatgcagctgcaccagttgccggtgcgcgcgcgccgtgcagccggtgtggtggccacggtcactgcccgcatggctgacaccaaccaggagtcgctgcggcagctgatccaagagcacgccggtgaggcagcaattgagcagaagcttgctgctccggaaatacccagtgggagcccataccggccttttggggcgtatgtcctgtgctctccggatggtgcggcgtgtgtcgacaatccaacagcagcggttcagatgctatatgcaacatttgctgcaaggcgtgctccagagacaggcgcggtgccacctgaggctgcacactcctgctacggtgacctcgtgctgagcatgccgcaccacttgctgctcaagaggcgccttggtgccacagtcaccgcacctgccgcgtccaactacgacgtcggcatctccattgcactggaggcatcaggtatcaccggtgaagctacagaggcagcaccggcacggcagtggctgaagacgtcgaagcgcgtgggccggagcccgagcctgaactgtgcgagcctcgcaacgcggttgggacggatcacgccgtgccgagcgcagatcgagtggtacaaggcattgttcgatgccaacaccgggtattacgacgcattcaagcagcggctatcacctaagaagttcagcaaggccaacatgtaccgcatcaagctcgcacagttctgggatggcgtcctctccatgcttgacaccagccagctcccctacgacttccaccgccgtgccaagtgggtcaacgctgcccacttctaccagctccttgttgagccacttgacattgccgactaccaccgaaacaacctacaccgcacacgcggctcttacatcacccatggccgggagagaaggtagaagcagtagcacaaaaccacattgttcattctagataattcatggactccattaggcttatgcactacctgtactctataggtatgagctgttcgacaagtggtggaaacagaagggctgcacagatcccagcactggtgacacctctgccaccacgacagcgaggaggagcaagttcgctgggctaacgcaggacccgtgcttctgggcgagggtggaggaagcgcgcgagcagacagagagtgccaagagcgaacgcgacatgacatcgctggcgaggatgctggaggacttgcacaagtttgagcgccattccagcgagctggtggagaacaaggaggtctccattgatgtcgttgcgccacagtcgagctactccctgtgggtgaaggagtggaatgagctcaagctccgggaagaagttaggacaatattgtttcaattttgaagttgaaacaccttaagaaaatttaattaattaattaattagttagtttgttgagcatttgtcatctagtttaggcacagatgaatgaatgttagcaacataatataggtgattgtaaatagatttagtcctggtagaggcattgcattatgatgtatctgttcttcatgttgaaatttgcaataacttgaagctgattcacttcacttc</dnaseqindica>|
| + | ==Labs working on this gene== |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001073956.2 RefSeq:Os11g0195500]|
| + | * National Key Laboratory of Crop Genetic Improvement, National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan 430070, China |
| − | }}
| + | |
| − | [[Category:Genes]] | + | ==References== |
| − | [[Category:Japonica mRNA]]
| + | <references> |
| − | [[Category:Oryza Sativa Japonica Group]] | + | * <ref name="ref1"> |
| − | [[Category:Japonica Genes]]
| + | Ke Y, Liu H, Li X, Xiao J, Wang S. Rice OsPAD4 functions differently from |
| − | [[Category:Japonica Chromosome 11]] | + | Arabidopsis AtPAD4 in host-pathogen interactions. Plant J. 2014 May;78(4):619-31. |
| − | [[Category:Chromosome 11]]
| + | doi: 10.1111/tpj.12500. Epub 2014 Apr 23. PubMed PMID: 24617729. |
| | + | </ref> |
| | + | </references> |
| | + | |
| | + | ==Structured Information== |
| | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]] |
