Difference between revisions of "Os07g0508500"

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(Created page with "{{JaponicaGene| GeneName = Os07g0508500| Description = Protein kinase-like domain containing protein| Version = NM_001066280.1 GI:115472292 GeneID:4343342| Length = 3152 b...")
 
(Annotated Information)
 
(20 intermediate revisions by 4 users not shown)
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{{JaponicaGene|
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The rice '''''Os07g0508500''''' was reported as '''''BRK1''''' in 2012 <ref name="ref1" /> by researchers from China.  
GeneName = Os07g0508500|
 
Description = Protein kinase-like domain containing protein|
 
Version = NM_001066280.1 GI:115472292 GeneID:4343342|
 
Length = 3152 bp|
 
Definition = Oryza sativa Japonica Group Os07g0508500, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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[[File:108-Os07g0508500.png|right|thumb|327px|'''Figure 2.''' ''Meiotic Chromosome Behavior in the Wild Type and brk1-1 Mutant.<ref name="ref1" />.'']]
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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===Gene Symbol===
            clade; Ehrhartoideae; Oryzeae; Oryza.
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*'''''Os07g0508500''''' '''''<=>''''' '''''BRK1,OsBRK1'''''
|
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===Function===
Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
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* '''''BRK1''''' may be required for normal localization of Aurora kinase before the onset of metaphase I, which is responsible for correcting the merotelic attachment.
AP = Chromosome 7:19988887..19992038|
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* '''''BRK1''''' Is Essential for the Centromeric Localization of SGO1
CDS = 19988919..19988966,19989046..19989133,19989352..19989455,19989533..19989604,19989687..19989776<br>,19989888..19990045,19990877..19990931,19991024..19991158,19991280..19991401<br>,19991653..19991842|
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* '''''BRK1''''' Is Required for Phosphorylation of Rice H2A-T134 during Both Meiosis and Mitosis
GCID = <gbrowseImage1>
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* Depletion of '''''BRK1''''' Reduces the Tension across Homologous Kinetochores during Metaphase I
name=NC_008400:19988887..19992038
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* '''''BRK1''''' Is Required for Correcting the Merotelic Attachment of Paired Sister Kinetochores during Metaphase I
source=RiceChromosome07
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===Expression===
preset=GeneLocation
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* During prophase I, chromosomal behavior in brk1-1 was quite similar to the wild type (Figures 2A and 2E). Whereas at the onset of anaphase I in brk1-1, although homologous chromosomes could separate equally, the two sister chromatids of each chromosome started to disassociate from each other (Figure 2F).
</gbrowseImage1>|
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* During telophase I in brk1-1, the sister chromatids of most chromosomes completely separated, and this precocious dissociation resulted in scattered chromatids that failed to line up on the equatorial plate during metaphase II (Figure 2G).  
GSID = <gbrowseImage2>
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* Consequently, sister chromatids were unequally separated at anaphase II in brk1-1, and the lagging chromosomes finally led to the formation of micronuclei during the tetrad stage (Figure 2H).
name=NC_008400:19988887..19992038
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source=RiceChromosome07
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===Evolution===
preset=GeneLocation
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* BRK1 Localizes to Kinetochores during Both Meiosis and Mitosis
</gbrowseImage2>|
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CDNA = <cdnaseq>atgaataatttattggagaacattaatgttgatctgaagaagttcgctggctatcataagagcaataaggtctatcatggaaaggtgccattaacttcgcctcagaatgttttaagaaacaaagtcattgaattaggtggtagaaagtaccagatcaaaggttctcctggtactggtgcttttgcaaaagtttacaaagccagtgtcgatggtaatacagaagacctggttgctttaaagattcagaaaccaccatttccttgggaattttacatgtatcgccagcttgatacgcgcgtatctgatattgagagaccaagctttggctacactcatgaagtgcatgtatacgctgatgtcagtgtgcttgtttgtgattacctgccatacggaactcttctggatgttataaattctcatctagtacttgaacgccatatggatgaagttctatgcatatattacactatagagatgctgcgcatgttggaaacactgcacagcgttggcataattcatggtgatttcaagcctgacaatatgcttgtttgctacccaagtggagaaatcacagacgaaaccttcaaaggcgagacaagatccgagcggaatcaggggctctgccttgttgactggggccgtggcatcgacctgaacctcttcccatccggtgcggagttctacggcgactgccgaacctccgggttcagctgcgtcgagatgcaggaacagagagcctggacgtttcaggctgacacttacggcctctgcgtcatcgcgcacatgatgctacatgggacgcagatgagcatccagaagacgcccaggcccgatggaagctacatgtaccagcccacatcgccgttcaaaaggtactggaacgtggagctgtggaaaaacctcttctccacgctgctcaacgcgacctccaacggcagcgacgcggccgtgctccggagcctccggatgtccttccaggagtacctgtgcagcaaccggcagctcgtcggcaagctgaaccagcaactggccaagcagaagacctccctgtgcctatcctga</cdnaseq>|
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You can also add sub-section(s) at will.
AA = <aaseq>MNNLLENINVDLKKFAGYHKSNKVYHGKVPLTSPQNVLRNKVIE                    LGGRKYQIKGSPGTGAFAKVYKASVDGNTEDLVALKIQKPPFPWEFYMYRQLDTRVSD                    IERPSFGYTHEVHVYADVSVLVCDYLPYGTLLDVINSHLVLERHMDEVLCIYYTIEML                    RMLETLHSVGIIHGDFKPDNMLVCYPSGEITDETFKGETRSERNQGLCLVDWGRGIDL                    NLFPSGAEFYGDCRTSGFSCVEMQEQRAWTFQADTYGLCVIAHMMLHGTQMSIQKTPR                    PDGSYMYQPTSPFKRYWNVELWKNLFSTLLNATSNGSDAAVLRSLRMSFQEYLCSNRQ                    LVGKLNQQLAKQKTSLCLS</aaseq>|
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DNA = <dnaseqindica>33..80#160..247#466..569#647..718#801..890#1002..1159#1991..2045#2138..2272#2394..2515#2767..2956#ctattttgctggatccatggtctgagtctactatgaataatttattggagaacattaatgttgatctgaagaagttcgctgtaagttgcatttactctatatgattcgctagtgtttatcttagctctcatcttggacggttgcccgaatccttgacagggctatcataagagcaataaggtctatcatggaaaggtgccattaacttcgcctcagaatgttttaagaaacaaagtcattgaattaggtataaactataatttcttgcttgtcagtcttttaccaaaactataatcatttttgtagtttggctcctttatgatccatgctctgtaagtcacaatgaatacataataatgctccttgaaaaaaaggaagaaatatacccttttttatttagaaaaaggccatttatattgatgacataacaaaagtttagttacaaatcccttttgttgcaccaaggtggtagaaagtaccagatcaaaggttctcctggtactggtgcttttgcaaaagtttacaaagccagtgtcgatggtaatacagaagacctggttgctttaaaggtgagtcatacttccatttgtcttactgaagcctgcttttttcatcagattcctctactgaacttgcccgtttgcagattcagaaaccaccatttccttgggaattttacatgtatcgccagcttgatacgcgcgtatctgatattgaggtacagaaattatctttaagaagaccataacatttgtaattgtaaaattatgattcacactgcaaaataattttacttccagagaccaagctttggctacactcatgaagtgcatgtatacgctgatgtcagtgtgcttgtttgtgattacctgccatacggaactcttctggtaaaatactttatgtattaatttttttttttgagatcatgatcatgcaaaactagcattttgtgcccggattagtgaatctgtgtttgataagatgcaaatcttttgcaggatgttataaattctcatctagtacttgaacgccatatggatgaagttctatgcatatattacactatagagatgctgcgcatgttggaaacactgcacagcgttggcataattcatggtgatttcaagcctgacaatatgcttgtttgctacccaaggtaagtagaggtaaccagcttagctttcaagttagaacacttgatggagcttcctccctcttcctcttgtgatctctaactgaaatatgggcaaaacacacacacacacacacacacacactctctctctctctctcacacagacacacacaaaactatccagtgaccattgacatcttacttttcataaaatcgacagatttattctagttgcaatatttgtgtgccgtccatttgcccagtgcccatattctcttgctatttgttttggacagatcttgttaccatgtttgtgggtgatgatgtctgtgctgtaaatattttactccaagcttcacaaccatctacaacttttataaactagatgttatatttaaactgatctaataacatagttttcaatgaaaatatttgacatggatggtcataacaacaagcatgttggtaagtggtcaatttgttggccccagatgttgggtttggtgggggcaaagatccttgctgatttactactgtttcaattactttatatgagcggttactggaatcttgcttgatggctccatcctccatgtttccgctgagatgacgattttttttgtcatttttgttggccatttgctgctattggcttgtttcggccaaaactcaattataacccatctagtacatgttacgcctgaaaaaaaaagaaagagtaaacctaatgctagtgtctgttcctttttgttctcgctatccaagtcttcacctcttcaatctttagcccttgtctcgacatgtaattttcgttcacccgcatctttgttttgcgtgtggtggtctgtgcagtggagaaatcacagacgaaaccttcaaaggcgagacaagatccgagcggaatcaggtcagcttctcaatcccaagttcccaacacgccgagaaacttggttaagatgttctggatatctcctgatgcttataggattcccattccaggggctctgccttgttgactggggccgtggcatcgacctgaacctcttcccatccggtgcggagttctacggcgactgccgaacctccgggttcagctgcgtcgagatgcaggaacagagagcctggacgtttcaggtatctgtaccctcccaagctacttactcaaaacctcctctcacctagacatctctgaaagcaacccctgcctgacgctgccagtttgtttgttggttggttgattggtttcttcctgcaggctgacacttacggcctctgcgtcatcgcgcacatgatgctacatgggacgcagatgagcatccagaagacgcccaggcccgatggaagctacatgtaccagcccacatcgccgttcaaaaggtgctttgatgccattgcctatacacctctttgataatttcctctatcccaaaatatagctactatgagatatttttcagtactatgaatctgaacaggtttagaaaatatctcatcctatgctagttagttatattttaagataaaggtagtagtaattaccatgattcgcagtagcgtaaataaatcagagattagattagatggcatatgtaacaggagctgtttgctgccattttgccccttgacaggtactggaacgtggagctgtggaaaaacctcttctccacgctgctcaacgcgacctccaacggcagcgacgcggccgtgctccggagcctccggatgtccttccaggagtacctgtgcagcaaccggcagctcgtcggcaagctgaaccagcaactggccaagcagaagacctccctgtgcctatcctgaccgagacatatacgcatctcgcgtttcatcctcatcatttttcccgattccctcgtgttgcctgtgtgtaaagtggtggagtataagataccttccgtaacttcgtagcacttcctctgtgcgtgcgtgtgcagcagtaattaacgtgccacatctccactttgaaagctgaaacatctactattgggccagatgg</dnaseqindica>|
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==Labs working on this gene==
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001066280.1 RefSeq:Os07g0508500]|
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* State Key Laboratory of Plant Genomics and Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
}}
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* College of Plant Protection,Yunnan Agricultural University, Kunming 650201, China
[[Category:Genes]]
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==References==
[[Category:Japonica mRNA]]
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<references>
[[Category:Oryza Sativa Japonica Group]]
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* <ref name="ref1">
[[Category:Japonica Genes]]
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Wang M, Tang D, Luo Q, Jin Y, Shen Y, Wang K, Cheng Z. BRK1, a Bub1-related
[[Category:Japonica Chromosome 7]]
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kinase, is essential for generating proper tension between homologous
[[Category:Chromosome 7]]
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kinetochores at metaphase I of rice meiosis. Plant Cell. 2012 Dec;24(12):4961-73.
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doi: 10.1105/tpc.112.105874. Epub 2012 Dec 14. PubMed PMID: 23243128; PubMed
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Central PMCID: PMC3556969.
 +
</ref>
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</references>
 +
 
 +
==Structured Information==

Latest revision as of 15:50, 17 October 2016

The rice Os07g0508500 was reported as BRK1 in 2012 [1] by researchers from China.

Annotated Information

Figure 2. Meiotic Chromosome Behavior in the Wild Type and brk1-1 Mutant.[1].

Gene Symbol

  • Os07g0508500 <=> BRK1,OsBRK1

Function

  • BRK1 may be required for normal localization of Aurora kinase before the onset of metaphase I, which is responsible for correcting the merotelic attachment.
  • BRK1 Is Essential for the Centromeric Localization of SGO1
  • BRK1 Is Required for Phosphorylation of Rice H2A-T134 during Both Meiosis and Mitosis
  • Depletion of BRK1 Reduces the Tension across Homologous Kinetochores during Metaphase I
  • BRK1 Is Required for Correcting the Merotelic Attachment of Paired Sister Kinetochores during Metaphase I

Expression

  • During prophase I, chromosomal behavior in brk1-1 was quite similar to the wild type (Figures 2A and 2E). Whereas at the onset of anaphase I in brk1-1, although homologous chromosomes could separate equally, the two sister chromatids of each chromosome started to disassociate from each other (Figure 2F).
  • During telophase I in brk1-1, the sister chromatids of most chromosomes completely separated, and this precocious dissociation resulted in scattered chromatids that failed to line up on the equatorial plate during metaphase II (Figure 2G).
  • Consequently, sister chromatids were unequally separated at anaphase II in brk1-1, and the lagging chromosomes finally led to the formation of micronuclei during the tetrad stage (Figure 2H).

Evolution

  • BRK1 Localizes to Kinetochores during Both Meiosis and Mitosis

You can also add sub-section(s) at will.

Labs working on this gene

  • State Key Laboratory of Plant Genomics and Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
  • College of Plant Protection,Yunnan Agricultural University, Kunming 650201, China

References

  1. 1.0 1.1 Wang M, Tang D, Luo Q, Jin Y, Shen Y, Wang K, Cheng Z. BRK1, a Bub1-related kinase, is essential for generating proper tension between homologous kinetochores at metaphase I of rice meiosis. Plant Cell. 2012 Dec;24(12):4961-73. doi: 10.1105/tpc.112.105874. Epub 2012 Dec 14. PubMed PMID: 23243128; PubMed Central PMCID: PMC3556969.

Structured Information