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| − | Please input one-sentence summary here.
| + | The rice '''''Os01g0125800''''' was reported as '''''AIP1''''' in 2013 <ref name="ref1" /> by researchers from China. |
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| | ==Annotated Information== | | ==Annotated Information== |
| | + | [[File:112-Os01g0125800.png|right|thumb|427px|'''Figure 2.''' ''The F-actin level is increased in OsAIP1 RNAi pollen grains but reduced in OsAIP1 OE pollen grains.<ref name="ref1" />.'']] |
| | + | ===Gene Symbol=== |
| | + | *'''''Os01g0125800''''' '''''<=>''''' '''''OsAIP1,AIP1''''' |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * Actin-interacting protein 1 ('''''AIP1''''') has been shown to be an important factor by acting coordinately with actin-depolymerizing factor (ADF)/cofilin in promoting actin depolymerization, the rate-limiting factor in actin turnover. |
| − | | + | * Specific down-regulation of '''''OsAIP1''''' increased the level of filamentous actin and reduced actin turnover, whereas over-expression of OsAIP1 induced fragmentation and depolymerization of actin filaments and enhanced actin turnover. |
| − | ===Expression=== | + | * '''''OsAIP1''''' acts coordinately with ADF and profilin to induce massive net actin depolymerization, indicating that AIP1 plays a major role in the turnover of actin, which is required to optimize F-actin levels in plants. |
| − | Please input expression information here.
| + | ===Phenotypic analysis=== |
| − | | + | * The actin cytoskeleton appeared to form a uniformly distributed network in control pollen grains (Figure 2a), but appeared fragmented in '''''OsAIP1''''' over-expression pollen grains (Figure 2b), suggesting that '''''OsAIP1''''' over-expression induced actin depolymerization. |
| − | ===Evolution===
| + | * By contrast, actin filaments became denser and more highly bundled in '''''OsAIP1''''' RNAi pollen grains (Figure 2c). The F-actin level was decreased in '''''OsAIP1''''' over-expression pollen grains but increased in OsAIP1 RNAi pollen grains (Figure 2d), and the F-actin level inversely correlated with the amount of '''''OsAIP1''''' transcript, suggesting that OsAIP1 inhibits actin polymerization. |
| − | Please input evolution information here.
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| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
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| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | * Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China |
| | + | * University of Chinese Academy of Sciences, Beijing 100049, China |
| | + | * Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China |
| | + | * Hunan Agricultural University, Changsha, 410128, China |
| | | | |
| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | * <ref name="ref1"> |
| | + | Xu Y, Zhang S, Guo H, Wang S, Xu L, Li C, Qian Q, Chen F, Geisler M, Qi Y, |
| | + | Jiang de A. OsABCB14 functions in auxin transport and iron homeostasis in rice |
| | + | (Oryza sativa L.). Plant J. 2014 Jul;79(1):106-17. doi: 10.1111/tpj.12544. Epub |
| | + | 2014 Jun 13. PubMed PMID: 24798203. |
| | + | </ref> |
| | + | </references> |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0125800|
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| − | Description = Nitrous oxide reductase, N-terminal domain containing protein|
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| − | Version = NM_001048428.1 GI:115434269 GeneID:4326007|
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| − | Length = 5144 bp|
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| − | Definition = Oryza sativa Japonica Group Os01g0125800, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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| − | AP = Chromosome 1:1412839..1417982|
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| − | CDS = 1412918..1413309,1413845..1414006,1414534..1414720,1415221..1415646,1416361..1416768<br>,1417397..1417654|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008394:1412839..1417982
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008394:1412839..1417982
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atggcgcagctgcaggagacgtacgcgtgctcgccggcgacggagcgcggccgcgggatcctcctcgcgggggaccccaagacggagacgatcgcctactgcacgggccgcagcgtcatcatccgccgcctcgacgcgccgctcgactgctgggcctacccggaccacgcctacccgaccaccgtcgcccgcttctcccccaacggcgagtgggtcgcctccgccgacgcctccggctgcgtccgcgtctgggggcgctacggcgaccgcgccctcaaggccgagttccgccccctctccggccgcgtcgacgacctccgctggtcccccgatggcctccgcatcgtcgtgtccggggacggcaaggggaagtccttcgtccgcgctttcgtgtgggactctggcagcactgttggtgagtttgacgggcactcaaagagagttctgagctgtgactttaagccaacccggccgttccgcattgtgacatgtggtgaagattttctggcaaactactatgaaggaccaccatttaaattcaagcattccataagggatcactcaaactttgttaactgtatccgatatgctcctgatgggagtaagtttatcagcgtgagttcagataagaagggtttgatatatgatggcaaaactggagacaagattggagaactttccagcgaaggcagtcacacagggagtatatatgctgttagctggagtcctgacagcaaacaagttctgacagtttctgctgataaaactgccaaagtctgggacatactagaagacgctagtgggaaattgaacagaactttggcttgtcctggtacaggtggagtagatgacatgcttgtgggttgcctctggcagaatgattatcttgtgacagtctctcttggtgggacatttaatgtgttctctgcaagtaatccagacaaagagccagtaacctttgcaggacatttgaagactgttagttctttggcctttttcccacaaagtaaccccaaaactatactgtccacaagttacgatggcgttatcatgagatggataaagggtgttggatatggtggcagattgatgcgaaagaacaacacccagattaaatgctttactgtagcagaagaggaactcgtcacctctggatatgataacaaggttttcagaattcctcttaatggagatcagtgtggagatgctgaatcagttgatgtaggaggtcagccaaatgctttgaaccttgcaattcaaaaacctgaatttgcactggtcacaacagattctgggatagtattgctgcacaagtcaacggtcatttctacaaccaaagttaattatactatcacttcatctgctgtttctcctgatggcactgaagccatcgttggtgcacaagatgggaaactgcgtatctattccatcaatggggatacagttacagaagaagcattaattgagaagcaccggggtgctattacttgcatacattattcgcccgatgtttccatgtttgcttctgctgatgccaacagggaagccgttgtgtgggatcgggcaacgagagagatcaagctgaagaacatgttgttccactcagctcggataaactgcctggcttggtcacctgacaatcgcctggttgccacaggctcattggacacctgtgcaattgtatatgaaatagacaagccagcatccagccgcatcaccgtaaaaggagctcatcttggtggagtccatggtttaacctttgtcgataatgatagtctggtgactgctggggaggatgcatgcatccgagtttggaagctggtgccacaatag</cdnaseq>|
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| − | AA = <aaseq>MAQLQETYACSPATERGRGILLAGDPKTETIAYCTGRSVIIRRL DAPLDCWAYPDHAYPTTVARFSPNGEWVASADASGCVRVWGRYGDRALKAEFRPLSGR VDDLRWSPDGLRIVVSGDGKGKSFVRAFVWDSGSTVGEFDGHSKRVLSCDFKPTRPFR IVTCGEDFLANYYEGPPFKFKHSIRDHSNFVNCIRYAPDGSKFISVSSDKKGLIYDGK TGDKIGELSSEGSHTGSIYAVSWSPDSKQVLTVSADKTAKVWDILEDASGKLNRTLAC PGTGGVDDMLVGCLWQNDYLVTVSLGGTFNVFSASNPDKEPVTFAGHLKTVSSLAFFP QSNPKTILSTSYDGVIMRWIKGVGYGGRLMRKNNTQIKCFTVAEEELVTSGYDNKVFR IPLNGDQCGDAESVDVGGQPNALNLAIQKPEFALVTTDSGIVLLHKSTVISTTKVNYT ITSSAVSPDGTEAIVGAQDGKLRIYSINGDTVTEEALIEKHRGAITCIHYSPDVSMFA SADANREAVVWDRATREIKLKNMLFHSARINCLAWSPDNRLVATGSLDTCAIVYEIDK PASSRITVKGAHLGGVHGLTFVDNDSLVTAGEDACIRVWKLVPQ</aaseq>|
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| − | DNA = <dnaseqindica>80..471#1007..1168#1696..1882#2383..2808#3523..3930#4559..4816#gttattaaccaccacctcctccaccactcgcgaccccaccccagatcaagcggaggaggaggaagaggagagggcaaaaatggcgcagctgcaggagacgtacgcgtgctcgccggcgacggagcgcggccgcgggatcctcctcgcgggggaccccaagacggagacgatcgcctactgcacgggccgcagcgtcatcatccgccgcctcgacgcgccgctcgactgctgggcctacccggaccacgcctacccgaccaccgtcgcccgcttctcccccaacggcgagtgggtcgcctccgccgacgcctccggctgcgtccgcgtctgggggcgctacggcgaccgcgccctcaaggccgagttccgccccctctccggccgcgtcgacgacctccgctggtcccccgatggcctccgcatcgtcgtgtccggggacggcaaggggaagtccttcgtccgcgctttcgtgtaagcacaacaacgcgcccccctcgatctcttctctttacatctcgatctcacgggaaaggatttgggggttcgggggatgcgaagggttgccaccttttctatattctggatcgtctgtcgttaggagatggagggcgtagaaattgttatcgcgatcttgcaatagaaagtgattcgaagatttgtagcctaaggtaatttttggggtgcttcgcaatggccaatggggattataggataggcctcctgacctcctcacggctcaccccttctatttgggtggtggatgtagattattaggaccacttgccattggcgttggattataagtttacaagtgaaatgttcattatttatcaagttgtaattgatgatcataatgatttttgttggcaccagatggatataccggccctgcaatcatgtaatcagtggggttcatttagaagtttattccatcatttattttttacattacatgtgttctcaattctggtatataaactcatgttcagccctttgaatcttgtaggtgggactctggcagcactgttggtgagtttgacgggcactcaaagagagttctgagctgtgactttaagccaacccggccgttccgcattgtgacatgtggtgaagattttctggcaaactactatgaaggaccaccatttaaattcaagcattccataaggttgcaaataatcaaataatactgccagtcttagtctgtcattttcatgcctacttaaaacttgtagtacactgcttctaaggttgtttgtttcctaatatttgttgggatgttcatggcataaggaccagatcacttgatatttcttctggtactacatgcattacatgtgcatacacgaaacttccattttccttggtatatattttgttttaacaaagatgacatctgcataaaaaaaatattagtgtaacctattgcccttacaaatttactttgtttgttccaatcttatctttatcaaacttgtgttatctaaattctgaaggataatgtttagcacttaaagaaaagcttaagtggcttgtttcagtgtaccactaagatatgttgcagatctacatatttcatgataccccttttagttttcatttgttgtcatttatgttctatatggtaagtttgtttcttctttctggcccttctttacatatattttatgtttacccgattccttcaaatttcagggatcactcaaactttgttaactgtatccgatatgctcctgatgggagtaagtttatcagcgtgagttcagataagaagggtttgatatatgatggcaaaactggagacaagattggagaactttccagcgaaggcagtcacacagggagtatatatgctgttagctggagtcctgacagcaaacaagtaatttcacattagttattccatattgttaattattgaactatcaattctgaaagtcttgaatttctggtatattgaaattgatcttggtcaaggactctaggtatgaagttccttcagtaggcggcagtaaagaacagaagtgcagattcagaaaatgtacttcatagaatataactttgttaaatgttaattatagataatgtacctatatgattgttggattgtctgcaaagtataagctttctgcctagatctgagaatgatctacctgtcagttgcatgacttatttatctaggatgtgcattttttctaatagaaattggaattcaattttagtctgtgcatactgcatactttagctatcatgacacatcagccttttatggtcttattgatgtatattttctgtttaccttcttgttccaagtaacttcatatgttttgcattctgtaattcatttctaactgtagtttcttcattcgcccatggctctaggttctgacagtttctgctgataaaactgccaaagtctgggacatactagaagacgctagtgggaaattgaacagaactttggcttgtcctggtacaggtggagtagatgacatgcttgtgggttgcctctggcagaatgattatcttgtgacagtctctcttggtgggacatttaatgtgttctctgcaagtaatccagacaaagagccagtaacctttgcaggacatttgaagactgttagttctttggcctttttcccacaaagtaaccccaaaactatactgtccacaagttacgatggcgttatcatgagatggataaagggtgttggatatggtggcagattgatgcgaaagaacaacacccagattaaatgctttactgtagcagaagaggaactcgtcacctctggatatgataacaaggtgagatagacaatgattagtataaatacccagtgttcctcaaaacgtctgttagagtaatagaatatgtattttttttattctttggaacctttttcttcatggtatataaaggttacaatgttgtgatcattgtttgtgaatgcttaaatcataggtttattaaagaaacacttctttgtattttagtacttttttcttaaacttcttaccactatgataggtggctaattgtgtgaccatgtgtgcatagtcaacttgttatgggaaattggcatggttgttattgtcggtcctgtactaatctatacaaatctcaatattgaatattcacagtgtctatccttacaattttaacttaaataatttggaaattgctaggtgggaaatgtgagtagtttgtatgagatctgtataactgtatttctataatgcaccaaaacagtaacagcttaaaaagtctgcagtctccaatttggatcaaacttcaggaacactttcatacagatgcatatacttgccatgatacaatgtgatgtacctcccacagtgcacagaaattgattctcgagtcccaagatgaccaaaatatagtgttattttattaatgccaacatcaacttctgagtttgaaattttaagtgtatttctctattcttgattaaacaatggagtttagtgatgagcaacttattattttctttttgaaagcaggttttcagaattcctcttaatggagatcagtgtggagatgctgaatcagttgatgtaggaggtcagccaaatgctttgaaccttgcaattcaaaaacctgaatttgcactggtcacaacagattctgggatagtattgctgcacaagtcaacggtcatttctacaaccaaagttaattatactatcacttcatctgctgtttctcctgatggcactgaagccatcgttggtgcacaagatgggaaactgcgtatctattccatcaatggggatacagttacagaagaagcattaattgagaagcaccggggtgctattacttgcatacattattcgcccgatgtttccatgtttgcttctgctgatgccaacagggaagccgttgtgtgggatcgggcaacgagagaggtattgccagttccacttcagtcttttctagttgttaagggattatagactgtccttttcttgtttttaggtcatcttttcactatgcactgtagtacattttcttaacctgaaaatcacgacagtagcatttgttttactgtttgttttcctcagttttactttcaatgaaggccatggatctatgacactgtccattggcaatggcatgtacattgactgatattatgaatctcactcttggttactgactatcttgatttgtcaccttattattacatttattctttacttttgtgaaatagaaaatgaaaattatgaaaataacttattgttgccagtcatgtatagtttgttgaaagtcattacagaaaatattttccttaaaagtattactgaaaatatgttggtccatatccaaggagaggtggaagcttgtgttccccttgtatgatttgcaattgcatgtgcacttatattacatttcagccccacattgccctactgctttacaagcaacttgtatagttacctgaaacttggtttctatgtaatttatggatttgttattttgtcttctttttggggaagaaaaggattgtactaacactattgttttcttcaacagatcaagctgaagaacatgttgttccactcagctcggataaactgcctggcttggtcacctgacaatcgcctggttgccacaggctcattggacacctgtgcaattgtatatgaaatagacaagccagcatccagccgcatcaccgtaaaaggagctcatcttggtggagtccatggtttaacctttgtcgataatgatagtctggtgactgctggggaggatgcatgcatccgagtttggaagctggtgccacaatagatgttctccctgatgttgcctgttgggcgtgtcttcgtcacttgattgaaataaacattgtttgcacttgtcccttagggtgtctgcgatttttttcctatgttgcgacgcagttggccttgagttgcattttctttttgttgcatttctggaagaacttgttgattgttgttattttatccctgcgtctgattttgttaggaactgagaattcagggatgctgtctttttttttccttcctccgtttgtaacctgcacatggctgtatctgtttgtaattttgaccgatcagctgcataatgctttcctctgctgccttttacatgt</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001048428.1 RefSeq:Os01g0125800]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
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| − | [[Category:Chromosome 1]]
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