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| − | Please input one-sentence summary here.
| + | The rice gene Os06g0598900 was reported as '''''Xa27''''' in 2005<ref name="ref1" /> by researchers from Singapore and USA. |
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| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''''Os06g0598900 <=> Xa27, OsXa27 |
| | + | |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * '''''R'''''-gene specificity is dictated by both host '''''R''''' genes and cognate '''''avirulence (avr)''''' genes in pathogens. The researchers report the cloning of the R gene '''''Xa27''''' from rice and the cognate avr gene '''''avrXa27''''' from Xanthomonas oryzae pv. oryzae. |
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| − | ===Expression=== | + | ===Expression === |
| − | Please input expression information here.
| + | * '''''Xa27''''' is not expressed at detectable levels in rice leaves unless it has been challenged with the incompatible bacteria and, more specifically, in the presence of AvrXa27. |
| | | | |
| | ===Evolution=== | | ===Evolution=== |
| − | Please input evolution information here.
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| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
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| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | *Temasek Life Sciences Laboratory, National University of Singapore, 1 Research Link, Singapore 117604, Singapore. |
| | + | *Department of Plant Pathology, Kansas State University, Manhattan, Kansas 66506, USA. |
| | + | *Institute of Molecular Agrobiology, National University of Singapore, 1 Research Link, Singapore 117604, Singapore. |
| | | | |
| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | * <ref name="ref1"> |
| | + | Gu K, Yang B, Tian D, et al. R gene expression induced by a type-III effector triggers disease resistance in rice[J]. Nature, 2005, 435(7045): 1122-1125. |
| | + | </ref> |
| | + | </references> |
| | + | |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]] |
| − | GeneName = Os06g0598900|
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| − | Description = Similar to Serine-threonine kinase receptor-associated protein (UNR-interacting protein) (WD-40 repeat protein PT-WD) (MAP activator with WD repeats)|
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| − | Version = NM_001064532.1 GI:115468795 GeneID:4341446|
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| − | Length = 7966 bp|
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| − | Definition = Oryza sativa Japonica Group Os06g0598900, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
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| − | AP = Chromosome 6:24490191..24498156|
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| − | CDS = 24490612..24490623,24490633..24490859,24491676..24491815,24491912..24492049,24492156..24492331<br>,24492726..24492807,24494186..24494321,24497683..24497800|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008399:24490191..24498156
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| − | source=RiceChromosome06
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008399:24490191..24498156
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| − | source=RiceChromosome06
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atggagaagaagaaggtggcggtgccgctggtgtgccacggccactcgcgcccggtcgtcgacctgttctacagccccgtcacgcccgacgggtacttcctcatcagcgccagtaaggatgggaatccaatgcttcgtaatggtgagactggagattggattgggactttccaaggtcataaaggggctgtctggagctgctgcctagacacaaatgctctgcgtgctgcatctggttctgctgacttttcagccaaagtttgggatgcactaacaggtgatgagctacattcatttgaacacaagcacattgtccgtgcatgcgcgttttctgaggatacccacctgttgctcactggaggcgtagaaaagattttgcgtgtctatgatatgaatcgtccagatgcagcaccaagagaacttgacaaagcacctggtaacgtgcgaactgttgcttggcttcatagtgatcaaacaatactaagctcgtgctctgatatgggaggagtaagattgtgggatgtgaggactggaaaaattgtccaaactcttgaaaccaaggcgcctgtgactagcgcagaagtaagtcaagacagcaggttcatcactacagctgatggctcgagtgttaaattttgggatgctaatcactttgggcttgttaaaagctatgatatgccttgcactgtggagtcagcttccctggaaccaaaatctgggagcaaatttattgttgggggagaagatatgtgggttcatgtatttgatttcttcactggtgaagaaataacctgtaacaaggggcatcatggtcctgtccactgtgtccgctttgcacctggcggtgaatcttatgcatcaggatcagaagatggcaccatccggatctggcagctgagcccacctaacgctgatgacaatgaggcggtcaattcaaatggcaaaccaacagttggggtaaatgaggttgcacgcaagatcgaaggcttccacattcccaaggaggaggagcagcaggctgaggggtag</cdnaseq>|
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| − | AA = <aaseq>MEKKKVAVPLVCHGHSRPVVDLFYSPVTPDGYFLISASKDGNPM LRNGETGDWIGTFQGHKGAVWSCCLDTNALRAASGSADFSAKVWDALTGDELHSFEHK HIVRACAFSEDTHLLLTGGVEKILRVYDMNRPDAAPRELDKAPGNVRTVAWLHSDQTI LSSCSDMGGVRLWDVRTGKIVQTLETKAPVTSAEVSQDSRFITTADGSSVKFWDANHF GLVKSYDMPCTVESASLEPKSGSKFIVGGEDMWVHVFDFFTGEEITCNKGHHGPVHCV RFAPGGESYASGSEDGTIRIWQLSPPNADDNEAVNSNGKPTVGVNEVARKIEGFHIPK EEEQQAEG</aaseq>|
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| − | DNA = <dnaseqindica>7534..7545#7298..7524#6342..6481#6108..6245#5826..6001#5350..5431#3836..3971#357..474#tcccctctccccccaaggctactcgcctagcgcccgccacctaggccgcggcctcatcccccccacctcttctgctcctctccccaataaaattccccgcacgaatcgatccccccctcggatccggatcgcctcgcccaccccctctccgccgctcgtcgatcgcgatttttttttcttcgccggatttttttttctcccgatcggtggggagggctctctctctctctctctctctctcttcaccctagggttagggggagcgccgccgcatttcggtccgccgccgccgccggagtcgaggagctagggttttcgtcggtcggggggggggaagaggtggggggttgagattgatggagaagaagaaggtggcggtgccgctggtgtgccacggccactcgcgcccggtcgtcgacctgttctacagccccgtcacgcccgacgggtacttcctcatcagcgccagtaagggtaagtgagcggcgatccgaccgcccgaccgcgatttgatgccgttttttttatggttttcctgctgcgattcgtctggatcgggggcggtgtgatctgatgccgccgcttttttagcgcgtggttctaatgtttgtgtgtattttttatatttttctgcggaggctatgttaatcgtgtgattttttaccgtgaaattgtggctacttttgtggagttcatgtctcgtgtattaatctagtttatgccgctgatcactgatgcagtttgggcatgattgctgtatgttgcgttgctagtcttctaatgcactatcttagtcatgatgaaatgtgttggttctatattattatttgttaatacgtgatcgtatgagtttattgtttgatatgtaatggtaggatatttgagcgtggttgtcaatggagtgtaccacaatgttactctttaacatacctagtgctgcatgttgcaatctagccggggtatgctatatttggacagccattttttctggttttaactcatatacgatgtgtgccaataagttgaggtgcgagaatgtttaacaatattggtagtcactcggtatgtgaccagagttttacaaggttgtaaattgggatagacggctgcctaggcaagtttactttgagcatgtgctatttggataggtggtgtctggccacaatatacttcctctgtcccaaaatgtagctacctagtgcagtacctagtccagattcgtagtacaagataacgtcatatcctgtactaggtagctacattttgggacggaggaagtaagtacatgttttaaacattgatcgtaacagtatagcaacatcttgccttctgtggtgcaatgttttatttaagacatctattcttagactggaagtgagctgtcaattctgaagaattaggcaggaccacctacttcattgatatttgtatgttgaactgaatcaaatatgccacagatcgttgatgcagtttgggcatgattgatgtaggttgccttgctagttttctaatgcgctgtcgtggtcatgcaatgtgttgattctgtgttgtttgttagtttggtcggaagtaggatgacagctgcactacatgatcacatgactttatcgttttatgtgtaatgggcaggatatttgttcaaaaaggagctagtcgatcggttgagtggcgcctagcaggtgcctaggtcagaccaaatagtcaaatccaagaaattagcaagcatattaaataaaaactagacttcattacactaaaatagcaacaaaataccacccaaggtagttcagctgcctaatgcaccatctaatgcctcattgccgtggctatcagaacactgcatggttgtggatagtgggtctggtgtacctcaatgacactctttaacatagctagtgctgcatgttgcaatatagctgggatatactataatgagtgggttgtatttagaggacagagccatttttctgaagtttcaatccatatatggcgggtgccaatatgttgaggtgatagaatgtgtaacaatatcggcagtcactcagtacgtagccagtgttctagaaggttgtgactagagctaagtcactgagtaagttgtggtagatggctgcctgggcaagtttactttgagcatgtgctattttgaagggtgatgtctagccacaatctaagcaatcatctttaaacattgataacagtataacaacatcttgccttctattgtgcaatgtttaatttcaggcctctattcttagactggaagtgagctgccaattctgaagaattaggcaggatcacctactttattgatattctttcaggaagtagttctttttgggggttaagataaggttatttatttgtttttcagacaatggaagaatgacattcggtctctacacctgaaggtgtacacagctgtgtcatgatgaagttttgcgacaatcgaccttattgatctataaaaaacacgacagttaaagcatccaattgattacaaagccaattaagctaccatccataactccatgatttgctccaaacatttgctcactgcaatggacactaattagtgctctttgcgttgaagtagagaccagaatcacaaccagttggagcacatgaaattactgtataggattaacatttttctttttgttaaatgcaatgtcattaggacaaagccaaatagaccaaaaaagggaggctatatagacaaattgattgtaacgtgcgaggtcatttaatgaatctgcaaataagtaaaccttatcggttatatactttgggcatcatgtgcccagggttttgagcaaatctaacatggttgggtattagcaaaacaagtggtagtatgaggacccatcatttttgtcataatagcatttttggctcattattgatatcgcttattattagcagggagttgcatatgcctagtgcatatggctgattagttggactaggcgacaacctagacatgctaagcattgactaggcagctagattctatgtagaatggtgatgcataggcacaaccacttttcgaatgatgcttgtaactataaagcaatgtacgagctatattgttcaaccctatgtgttggaagctagctgccctttttggccacaaacacctacttcatttatatttcctatgttggtaacactgtttccgggttgcttggacatatgtagaaggtagttaatgctttgttggagtggtagttaatatagtttgattaaggaggagatccttgtaaaagctgcatatttgtatccatgattcgaaacaagacaggaaactagcgtgtgttctgtcatagctgttgccttgttgccatttcatttttggagggttaggtttaattcatgtttattagtatatggaattacataattgcattatatgctctaggttttcctccatgggataatatgtatagcaagcgccaaccattcaatgctttaaatacggcataacaatcagctgctaataccttctttttgatacaagtcttagtgttgagctttggcatgatgactaatgtagtaactaaatgactttagttttacttgagaacttagtgcaaaatgctaacatttgagaagagcaccataccctgtcatagggtttgtgcgaactttgattagtattacttttggtctgaactacactgacttcactttgcaatgcattgtagaaatctaattgttttttagattgatgtttattatacaaaaactaatttgggtataaatctaattgttttttagattgatgtttattatacaaacactaatttggtaatattgtatgttttgatcttagatgggaatccaatgcttcgtaatggtgagactggagattggattgggactttccaaggtcataaaggggctgtctggagctgctgcctagacacaaatgctctgcgtgctgcatctggttctgctgacttttcagcgtatgacattcaccctatgaaatttcagtggtgtctattttaattatttatctttgacaaaaatggaatgtgcatgcattcagtgtatttatatttttattacaattttttttcatccagacgtgctacttgcaggtgtaattataatatattatagttcagttctgaatgttcatggtatctagtgtatttcttttttgcctttggaaaagaatccatcaaaaacttcagatgatgtaatatttgttcaaagcttgatttttacttaattttctctagatgagaagaaaaatgattgttatggatctagtcattaataacacatattcttaaactcgtaataaacatataagcatagtttagctttagcatagcactgttcgccttgcagaaattactgaggataaaaactgaatttgttatttctgctttcttccaaatcttgtgtttctgcgtaccattttgattcttttttgcagcatggagaattggatcttaagtatgtttcaaaatgaatataaatatcagcactgagagttctccaaagtgctttagacttgcttattttgtgttctctgctcttgattacattcatgaaataccaaaacataatggattgattactcaacataaaggttatgtggaaccaaaggaaatctgcatctcatatactccctccaaaagtctaagacattattttattttctggtttttccaaatgagttgggcatatttgtagtctctatgtactaaattaaattgttgacctgaacccaagcagccatcttaatactcattggttgcatgcattcatctagttccttggttttgtcacatggggtggatgagttaattcctccttggtcttggtgacaaaaaaaatatgccttagacttttggatagagggagtaatataaaacaatatgccattaatttgtgcctaaaagagtagaggatgcttgaagctcaattttggcatgaagatttgcatagtaaaacaattttgtaattttagcacatggcttacagattagtatgttgaggagtttggaattatggagaatttatggtgtatcctgaagttggtggttgtgcataaattagttatgaatgattgaacgtaaggtacacccataagtcatctcgtgaatgtgatctacagtaggatgctgttttgcaattctaagttgcaacatttagaattctaagttgtgatctacagcataatatatgttggttttgaggccttgcaacacaaataaataacagattgttgctgctcaactaatattctagtccttgagttagtacttacgagttatgtccattacaagtttattttgctcttataatagatgtatgttgatttttttccagcaaagtttgggatgcactaacaggtgatgagctacattcatttgaacacaagcacattgtccgtgcatgcgcgttttctgaggtaatgcttccagaatgttttaatcatcagtgctagctttgtggattttctctttctaccctatagaaagtgtatgctgtccttcttttctttgaatatttttccagacactctggactgttaaactaaggtctggtggccttatgcctgtgcacagatcatggactgtcttaatgaaaatgtatataccaaccttctgatatcagtatttaatcacttgctatgaaccaagtatttaatcacttacaattaactaagtgtatatcagtatatccatgtaactgttatagcttcttgctaccttatctgcagtatgttgcagcatttaatttcaaaataatgctgtcctttgtgagcagtttgaaatctaattaaatggccattggcgctgtaggatacccacctgttgctcactggaggcgtagaaaagattttgcgtgtctatgatatgaatcgtccagatgcagcaccaagagaacttgacaaagcacctggtaacgtgcgaactgttgcttggcttcatagtgatcaaacaatactaagctcgtgctctgatatgggaggagtaaggtgtgtctggaaaaaatatcttcattctataggaagagctgctaccatttgttcctagtttattgtaattttgttcctcttatttaattgttatggcactgcacagattgtgggatgtgaggactggaaaaattgtccaaactcttgaaaccaaggcgcctgtgactagcgcagaagtaagtcaagacagcaggttcatcactacagctgatggctcgagtgttaaattttgggatgctaatcagtacgtattatttctatcatcattataccgttgttctgtgtcatacaaaattattaaatcctttgcaacaaacattttttgctggttattttgcagctttgggcttgttaaaagctatgatatgccttgcactgtggagtcagcttccctggaaccaaaatctgggagcaaatttattgttgggggagaagatatgtgggttcatgtatttgatttcttcactggtgaagaaataagtaagcattatatatttttcattcacttgtccttcaaactttaatgcagtttttcttttcaaaatgagaacattacgttccactgttgtggcttgaagagcatttaaacatgttgaacaactgtaacatactattatttgcttagatactgacctcaaggcttgattgcaactgataatgtgtagctaaaatcctgtgttcagaagttgggtcgtacttgtacttagaatttctaacagtccttgcacatttatgataacagttatgcaggggacagtcgtttccactgttgcagtaactagcttatcgtgggaaccatgagtcactagtgtgatcaaacaaatatttttctaacttttttgccctccattaattaatgcataatggatatgaaataaataattcaaatttcaaaaagtttgacccaaagcttgtcctaaatatcaaattttatgactggaaggagtacatggcattgccatgctttttttgtcatatagttgcactagttttatttcagtcctaacctttaggaacaatttcctactttagttgctcggctctttgtacttgtattatactccctccatttccttttgtttgacgttgaactaaccacgtcatacatttggaaatagaggtagtatattgtgtaacctttttaatagttttttcggtgggatatttctttgggaaattgtagaattgttcaaatcagaaattccaattctctttaatcatactgacaaatggcttttatttcattgtaatctctgttccaattaagctgattgttttttttttaacaatgtgcagcctgtaacaaggggcatcatggtcctgtccactgtgtccgctttgcacctggcggtgaatcttatgcatcaggatcagaagatggcaccatccggatctggcagctgagcccacctaacgctgatgacaatgaggcggtcaattcaaatggcaaaccaacagttggggtaaatgaggttgcacgcaagatcgaaggcttccacattcccaaggaggaggagcagcagcagcagcaggctgaggggtaggactacaaggttggcaaacatggcagtgcttggtgcttactgggagatgattgcttgtcgatgctcctctccttcccgtttctcccttgctttgttgatgcccttggttcccgacgcaaggggggagagatcttgtcctccgtgaccaaaacggtggatttctgtatggggccctcaccaaatagacagtgtcagggtagtatctatctacagtgccaaaataaaccaagaggaaagcaagttggtagtttagtatcgttgattgcattcacagaagtgaaagtcttgtattccgctggtggccgtgatacagcagatgccattgtgttcaccggtttttgcctcccctacccttctatggactcttttcttatcaggaattgcttctttttattattgccgctgttttgacttctgatgc</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064532.1 RefSeq:Os06g0598900]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 6]]
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| − | [[Category:Chromosome 6]]
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