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| − | {{JaponicaGene|
| + | The rice '''''Os01g0578000''''' was reported as '''''RAD51C''''' in 2012 <ref name="ref1" /> by researchers from China. |
| − | GeneName = Os01g0578000|
| |
| − | Description = RecA bacterial DNA recombination family protein|
| |
| − | Version = NM_001049929.1 GI:115437841 GeneID:4323853|
| |
| − | Length = 4979 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os01g0578000, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | [[File:223-Os01g0578000.png|right|thumb|427px|'''Figure 2.''' ''Phenotypes of RAD51C-KO plants.<ref name="ref1" />.'']] |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | ===Gene Symbol=== |
| − | |
| + | *'''''Os01g0578000''''' '''''<=>''''' '''''OsRAD51C,RAD51C''''' |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| + | |
| − | AP = Chromosome 1:24010272..24015250|
| + | ===Function=== |
| − | CDS = 24010568..24010746,24012475..24012541,24013251..24013382,24013579..24013805,24013885..24013955<br>,24014026..24014059,24014300..24014422,24014706..24014810,24015059..24015170<br>|
| + | *'''''RAD51C''''' is essential for reproductive development by regulating meiosis as well as for DNA damage repair in somatic cells. |
| − | GCID = <gbrowseImage1>
| + | |
| − | name=NC_008394:24010272..24015250
| + | ===Phenotypic analysis=== |
| − | source=RiceChromosome01
| + | * Transferring RAD51C to the RAD51C-KO line restored fertility. Cytological analyses showed that the sterility of RAD51C-KO plants was associated with abnormal early meiotic processes in both megasporocytes and pollen mother cells (PMCs). |
| − | preset=GeneLocation
| + | * PMCs had an absence of normal pachytene chromosomes and had abnormal chromosome fragments. |
| − | </gbrowseImage1>|
| + | * The RAD51C-KO line showed no obvious difference from wild-type plants in mitosis in the anther wall cells, which was consistent with the observation that the RAD51C-KO line did not have obviously abnormal morphology during vegetative development. |
| − | GSID = <gbrowseImage2>
| + | * However, the RAD51C-KO line was sensitive to different DNA-damaging agents. |
| − | name=NC_008394:24010272..24015250
| + | |
| − | source=RiceChromosome01
| + | You can also add sub-section(s) at will. |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage2>| | + | ==Labs working on this gene== |
| − | CDNA = <cdnaseq>atggagatcgccgacctccccatcgccacctcccaccgcgccaacctcctcgccgccggctactcctccctcgccgcgctctccgccgcctcccctccccgcctcgcccgagatttgagcattgaggtacatgaggctgaagaaatcctcaaggttgccgtgggcgccaacaagtccaagggagcagatgggcctagcaccagcagtgttctcaaaggtgtgcaaaatgcatgggatatgctatctgatgagcaatcacggaggcacatcaatactggatctgctgacctcaacaacatccttggtggagggattcactgtaaagaggttactgagattggtggtgtcccaggagtcggtaaaactcaactggggattcaactagcaatcaatgttcaaattccagtggagtatggtggacttggtgggaaagctgtttatatagatacagagggaagtttcatggttgaacgtgtctaccaaattgctgaagggtgcatcagtgatatactggagtactttccacactgccatgacaaggctccagccggacaagaaaaactgaagcctgagagtttcctggctgacatctactactttcgaatatgcagctatactgaacaaattgcagtcataaactatctggaaaagtttcttggggagcataaagatgtaagaatagttattattgacagcgttactttccactttcggcaagattttgatgatatggcactaaggactagagtgcttagtggattatcattgaagttgatgaaactttcaaaggcatataacttggcggttgtcttgttgaaccaagttactactaaattcacagaaggatcatttcagttaactcttgctctaggtgacagttggtcccactcatgcaccaatcgactaattctgtattggaacggcaatgagcggtatggattcctggacaagtccccttcactaccagtagcatcagcaccatatgcagtgacagttaaaggggtgagagatgctgtgaattcaaacagcaagcgagtccgggtaatgtag</cdnaseq>|
| + | * National Key Laboratory of Crop Genetic Improvement, National Center of Plant Gene Research (Wuhan), Huazhong Agricultural |
| − | AA = <aaseq>MEIADLPIATSHRANLLAAGYSSLAALSAASPPRLARDLSIEVH EAEEILKVAVGANKSKGADGPSTSSVLKGVQNAWDMLSDEQSRRHINTGSADLNNILG GGIHCKEVTEIGGVPGVGKTQLGIQLAINVQIPVEYGGLGGKAVYIDTEGSFMVERVY QIAEGCISDILEYFPHCHDKAPAGQEKLKPESFLADIYYFRICSYTEQIAVINYLEKF LGEHKDVRIVIIDSVTFHFRQDFDDMALRTRVLSGLSLKLMKLSKAYNLAVVLLNQVT TKFTEGSFQLTLALGDSWSHSCTNRLILYWNGNERYGFLDKSPSLPVASAPYAVTVKG VRDAVNSNSKRVRVM</aaseq>|
| + | |
| − | DNA = <dnaseqindica>4505..4683#2710..2776#1869..2000#1446..1672#1296..1366#1192..1225#829..951#441..545#81..192#aaaaaaaaaaaccatcgccagtcgccgcccgcgcggagcatccatcctcaacctcccaagttcggcgcccaatcccggcgatggagatcgccgacctccccatcgccacctcccaccgcgccaacctcctcgccgccggctactcctccctcgccgcgctctccgccgcctcccctccccgcctcgcccgaggtacgcccccccacccatcaccccccacctgcggggggttagggtttagggatgattagctagtgcgttcgtgctccgatggatgatccccctttttttgctcgaattggtaccagtgtctttgctcctagtctcgtgccgcgtagctgtgatatttatgtctcttattaagacattgcttggtcatctcgtgtgcgtgtgtgtctattggaggatgagccactgttcttggcatgttgtttttgcagatttgagcattgaggtacatgaggctgaagaaatcctcaaggttgccgtgggcgccaacaagtccaagggagcagatgggcctagcaccagcagtgttctcaaaggtacaattactctcggtccgctccgatgcaattttcttggtagatttatctgtgctttggtttccctgtgccatgctttcttattgtgtaaggtaaaatgatgccctaggacgatatggtgtgcacatatactttgcctccgtgggaacattttattgtttcccaatcatcaataacccatgtttgattctgtgaggtcctaatttgtttgatgtcacggagatccttgacataacaatggaccataatttgtactgcttttgactcgtgcggatatttacaggtgtgcaaaatgcatgggatatgctatctgatgagcaatcacggaggcacatcaatactggatctgctgacctcaacaacatccttggtggagggattcactgtaaagaggttactgagattggtgagttacttttaacgtctctactaacaaagggatgagattcactatctcctgataaagccattaattttccattcctccgacgaattgtattgattataacgatccatgtcctatgtggatactgaatatctgataagcctttggttttcccctattttcttgtagacattgattgttatgcccatctttttttaatctgaagtgattggcctaatcaacacatctagtttgattcaggtggtgtcccaggagtcggtaaaactcaactggggtatgttgtacacaatattaaatgcaaattcagatgaagatttcactactaaagacctaacttttgtcaggattcaactagcaatcaatgttcaaattccagtggagtatggtggacttggtgggaaagctgtttatataggtacatagtttcacactaaggcacttatcatcttttgtcttagcaataaagtcttaagagtatctgcttattttaacagatacagagggaagtttcatggttgaacgtgtctaccaaattgctgaagggtgcatcagtgatatactggagtactttccacactgccatgacaaggctccagccggacaagaaaaactgaagcctgagagtttcctggctgacatctactactttcgaatatgcagctatactgaacaaattgcagtcataaactatctggaaaagtttcttggggagcataaagatgtaattttcttgaacaatttagtcttgaattattagtttataaccaccttaagtttgtaccttaatttcttcaaaataaatatgttttgcattaacgcaattttgtcccacagtagtttcatgccatgccattgcttttacaatctaccacaatttatgaaattgaagccaataattttttcttcctccttgacaggtaagaatagttattattgacagcgttactttccactttcggcaagattttgatgatatggcactaaggactagagtgcttagtggattatcattgaagttgatgaaactttcaaaggcatataacttggcggtaagctgcctaccctattagatcaagtgaagcaggagctaccactgttggtgttagtttcgtaaaatggagatctgtgcatattcattcaacatctgcaatatatgtgctgtcattatgtcatccgtcttgattgatgtaattttggatatactcatatggtaacacaaagccattatacttctacaaaaacactaggtttcatttttcttgattgattactagactcaaccagagtgatattctagttgctaaagcgagatttgaggtagctttataagcacgtaacatttcaacttcagacaaatcaaattagttctgttcagcagcagcaaacacgattttattttgttaatggaatgtgctaagacttgttcttcattgtattgagattcaaatgggattttatcagtggagatcaaagattagaaggaacaaatgcctttatgggtgaagataaactattgaccactaggggcatggtctgctcggaaccacaatagttaccctcatggccatttcataatttgctaaccacacaattactttatgctatcctttcttccactatcctccccattcatatttctttatcccattttgctcattcctctataaatcaggaatgacttaattacggttttgccttaggtagagataccctgcgcaatgaggttaacatacttatcatcttattttgtttgagcaggttgtcttgttgaaccaagttactactaaattcacagaaggatcatttcagttaactcttgctctaggtcagtttctattcataaattataacccctctttttagttcgcaatcaccatcaaatgcctacattttctctttgttccctaataatcactagtgactaaaattaaagaacctgacttgatgttcttactgctgtgggctttgatttgatgggctgtggctaggttggccttcattagggagtaattatatcgagttgcattagagataagtactaggaatttatattacagacctttttaggtgagtattagaaatacaattaccatctacctatgatgatatttgctcattatattattaagagatggtgaaaaagagccactatgttcactctcaactctcaaggactggaaatcaccaccttaatcaagagaaagcaaaatatctatgtcattgatcatggcagagcccaaattatgactatgtgatatcacctatacagtatacaatatactattttattattgaaatagaatcgagagttatcaaatacatttctacttttgaatcaattgtaacctagctctgtacaatttgtgttggaaatttggtaactgtctactaatttaaggttgttatgggtggggacctgccctataaacgctatcggacagtttaagaagaatttagcatcgaataaacaaatctccaagtctctctgtctcacatatatccagacattcagttgctcctaatgatttctgtctcctctctgccaagcctactctttcaactaatgggtttacctcaaattgtccgtgtgtgatcttcctctgatcatagttattagaaccggaccagaccggcggtccgaccggaataaaccggaaccagcgctcttagcagtcaggttcgattaaaagaccgttgcgcaatcggactggtaaatacccggtcaaaccgggcggttttttggtaaactggccagttctctagattttggccggttataagccggtgattgcccacgtgggcttgtcagccattgctcgagtatataatataagagaaaattgaggtaaaaagagtgaaggctgggaatcgaacccgtgatcacgcgtgcaacacccaaatactccaccgttggtctatgacatttgttggtctttatgatgcgtcatttatctatttaacccggatcaaaccggtggtctaaccggttagaccaataaaccaatgaaccgagcacttagcggttcgatcaccggtccggtcttaatagctatgcctctgatggatgcttaccctgttatgtggtttgtaatacttactaagagagtaaaactatgcttggctgctataccttggtttgtaacacttactaagttttggctactatacctaagatagtttaatttatggggtagatggcatgttttgggatactctgttatttagagttaatgaattattatcctgggatatcaattccagttattgcttgtagcaagcaaagctgtggggtccttctggttgtagttcactttgaaaaccatgataatgcaggtgaattaatattatgttactaatttcatgccatttttattttgtcacaaaatcgaaacagattcccccgctggaatgtaaataaaatgactacaaaaatatataagatgcacgtacaaccttgatatgttccttttgtgcagcatgttacttgccgactatttcttgtattggaccgtcgtttgtaaggaatggtaataatgaaaatgctgctatgcaggtgacagttggtcccactcatgcaccaatcgactaattctgtattggaacggcaatgagcggtatggattcctggacaagtccccttcactaccagtagcatcagcaccatatgcagtgacagttaaaggggtgagagatgctgtgaattcaaacagcaagcgagtccgggtaatgtagcaatcttggtgttgaacccttttaccattagtagccatcgaccgtcatgtctaaactgtgcagcattctctgatctttctaactaagctgattgaaatttggatcatgtgtaacgctgtcttatttgcttctgccggtagctaattgtacaaaggtaactgaagcaaaagagggtgcttcattttggttgatccaaacatgtaacagctaacaagtactctacaggcctgttacaaacttacaaacagaatgatgccggatgtgttccgatgccaggaaattatcctcgttttttc</dnaseqindica>| | + | ==References== |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001049929.1 RefSeq:Os01g0578000]|
| + | <references> |
| − | }}
| + | * <ref name="ref1"> |
| − | [[Category:Genes]] | + | Kou Y, Chang Y, Li X, Xiao J, Wang S. The rice RAD51C gene is required for the |
| − | [[Category:Japonica mRNA]]
| + | meiosis of both female and male gametocytes and the DNA repair of somatic cells. |
| − | [[Category:Oryza Sativa Japonica Group]] | + | J Exp Bot. 2012 Sep;63(14):5323-35. doi: 10.1093/jxb/ers190. PubMed PMID: |
| − | [[Category:Japonica Genes]] | + | 22859673; PubMed Central PMCID: PMC3431001. |
| − | [[Category:Japonica Chromosome 1]]
| + | </ref> |
| − | [[Category:Chromosome 1]]
| + | </references> |
| | + | ==Structured Information== |
| | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
