Difference between revisions of "Os10g0558900"
(Created page with "{{JaponicaGene|
GeneName = Os10g0558900|
Description = 2OG-Fe(II) oxygenase domain containing protein|
Version = NM_001071899.1 GI:115483393 GeneID:4349365|
Length = 2021 ...") |
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| − | + | The rice '''''Os10g0558900''''' was reported as '''''RL14''''' in 2012 <ref name="ref1" /> by researchers from China. | |
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| − | + | ==Annotated Information== | |
| − | + | [[File:Os10g0558900.png|right|thumb|327px|'''''Figure 2. Phenotypic analysis of RL14 mutants''''']] | |
| − | + | ===Gene Symbol=== | |
| − | + | *'''''Os10g0558900''''' '''''<=>''''' '''''RL14,OsRL14''''' | |
| − | + | ===Function=== | |
| + | * '''''RL14''''' encode a 2OG-Fe (II) oxygenase of unknown function. | ||
| + | * '''''RL14''''' gene affects water transport in leaves by affecting the composition of the secondary cell wall. | ||
| + | * This change in water transport results in water deficiency, which is the major reason for the abnormal shape of the bulliform cells. | ||
| + | |||
| + | ===Phenotypic analysis=== | ||
| + | * rl14 mutant plants had incurved leaves because of the shrinkage of bulliform cells on the adaxial side. | ||
| + | * In addition, rl14 mutant plants displayed smaller stomatal complexes and decreased transpiration rates, as compared with the wild type. Defective development could be rescued functionally by the expression of wild-type RL14. | ||
| + | |||
| + | ===Expression=== | ||
| + | * '''''RL14''''' was transcribed in sclerenchymatous cells in leaves that remained wrapped inside the sheath. | ||
| + | * In mature leaves, '''''RL14''''' accumulated mainly in the mesophyll cells that surround the vasculature. | ||
| + | * Expression of genes related to secondary cell wall formation was affected in rl14-1 mutants, and cellulose and lignin content were altered in rl14-1 leaves. | ||
| + | |||
| + | ===Evolution=== | ||
| + | * The RL14 gene was mapped first to an interval between the simple sequence repeat (SSR) markers RM3123 and RM1162 on the long arm of chromosome 10. | ||
| + | * Finally, the RL14 locus was mapped to a 24.5-kb DNA region between the InDel marker SID2 and SSR marker SW24 on a single bacterial artificial chromosome, AC079874. | ||
| + | * RL14 was related most closely to members of the 2OG-Fe (II) oxygenase family from rice and sorghum. | ||
| + | * Orthologous of RL14 was identified in other species, such as maize, Arabidopsis, Papaver somniferum, Vitis spp and Ricinus communis. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | * Rice Research Institute, Chongqing Key Laboratory of Application and Safety Control of Genetically Modified Crops, Southwest University, Chongqing, China | ||
| + | |||
| + | ==References== | ||
| + | <references> | ||
| + | * <ref name="ref1"> | ||
| + | Zhang K, Qian Q, Huang Z, Wang Y, Li M, Hong L, Zeng D, Gu M, Chu C, Cheng Z. | ||
| + | GOLD HULL AND INTERNODE2 encodes a primarily multifunctional cinnamyl-alcohol | ||
| + | dehydrogenase in rice. Plant Physiol. 2006 Mar;140(3):972-83. Epub 2006 Jan 27. | ||
| + | PubMed PMID: 16443696; PubMed Central PMCID: PMC1400561. | ||
| + | </ref> | ||
| + | </references> | ||
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[[Category:Genes]] | [[Category:Genes]] | ||
[[Category:Japonica mRNA]] | [[Category:Japonica mRNA]] | ||
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[[Category:Japonica Chromosome 10]] | [[Category:Japonica Chromosome 10]] | ||
[[Category:Chromosome 10]] | [[Category:Chromosome 10]] | ||
| + | ==Structured Information== | ||
Latest revision as of 09:13, 8 May 2017
The rice Os10g0558900 was reported as RL14 in 2012 [1] by researchers from China.
Contents
Annotated Information
Gene Symbol
- Os10g0558900 <=> RL14,OsRL14
Function
- RL14 encode a 2OG-Fe (II) oxygenase of unknown function.
- RL14 gene affects water transport in leaves by affecting the composition of the secondary cell wall.
- This change in water transport results in water deficiency, which is the major reason for the abnormal shape of the bulliform cells.
Phenotypic analysis
- rl14 mutant plants had incurved leaves because of the shrinkage of bulliform cells on the adaxial side.
- In addition, rl14 mutant plants displayed smaller stomatal complexes and decreased transpiration rates, as compared with the wild type. Defective development could be rescued functionally by the expression of wild-type RL14.
Expression
- RL14 was transcribed in sclerenchymatous cells in leaves that remained wrapped inside the sheath.
- In mature leaves, RL14 accumulated mainly in the mesophyll cells that surround the vasculature.
- Expression of genes related to secondary cell wall formation was affected in rl14-1 mutants, and cellulose and lignin content were altered in rl14-1 leaves.
Evolution
- The RL14 gene was mapped first to an interval between the simple sequence repeat (SSR) markers RM3123 and RM1162 on the long arm of chromosome 10.
- Finally, the RL14 locus was mapped to a 24.5-kb DNA region between the InDel marker SID2 and SSR marker SW24 on a single bacterial artificial chromosome, AC079874.
- RL14 was related most closely to members of the 2OG-Fe (II) oxygenase family from rice and sorghum.
- Orthologous of RL14 was identified in other species, such as maize, Arabidopsis, Papaver somniferum, Vitis spp and Ricinus communis.
Labs working on this gene
- Rice Research Institute, Chongqing Key Laboratory of Application and Safety Control of Genetically Modified Crops, Southwest University, Chongqing, China
References
- ↑ Zhang K, Qian Q, Huang Z, Wang Y, Li M, Hong L, Zeng D, Gu M, Chu C, Cheng Z. GOLD HULL AND INTERNODE2 encodes a primarily multifunctional cinnamyl-alcohol dehydrogenase in rice. Plant Physiol. 2006 Mar;140(3):972-83. Epub 2006 Jan 27. PubMed PMID: 16443696; PubMed Central PMCID: PMC1400561.
