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| − | {{JaponicaGene|
| + | The rice gene Os06g0598900 was reported as '''''Xa27''''' in 2005<ref name="ref1" /> by researchers from Singapore and USA. |
| − | GeneName = Os06g0598900|
| |
| − | Description = Similar to Serine-threonine kinase receptor-associated protein (UNR-interacting protein) (WD-40 repeat protein PT-WD) (MAP activator with WD repeats)|
| |
| − | Version = NM_001064532.1 GI:115468795 GeneID:4341446|
| |
| − | Length = 7966 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os06g0598900, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Gene Symbol=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *'''''Os06g0598900 <=> Xa27, OsXa27 |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | |
| − | |
| + | ===Function=== |
| − | Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
| + | * '''''R'''''-gene specificity is dictated by both host '''''R''''' genes and cognate '''''avirulence (avr)''''' genes in pathogens. The researchers report the cloning of the R gene '''''Xa27''''' from rice and the cognate avr gene '''''avrXa27''''' from Xanthomonas oryzae pv. oryzae. |
| − | AP = Chromosome 6:24490191..24498156|
| + | |
| − | CDS = 24490612..24490623,24490633..24490859,24491676..24491815,24491912..24492049,24492156..24492331<br>,24492726..24492807,24494186..24494321,24497683..24497800|
| + | ===Expression === |
| − | GCID = <gbrowseImage1>
| + | * '''''Xa27''''' is not expressed at detectable levels in rice leaves unless it has been challenged with the incompatible bacteria and, more specifically, in the presence of AvrXa27. |
| − | name=NC_008399:24490191..24498156
| + | |
| − | source=RiceChromosome06
| + | ===Evolution=== |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage1>| | + | You can also add sub-section(s) at will. |
| − | GSID = <gbrowseImage2>
| + | ==Labs working on this gene== |
| − | name=NC_008399:24490191..24498156
| + | *Temasek Life Sciences Laboratory, National University of Singapore, 1 Research Link, Singapore 117604, Singapore. |
| − | source=RiceChromosome06
| + | *Department of Plant Pathology, Kansas State University, Manhattan, Kansas 66506, USA. |
| − | preset=GeneLocation
| + | *Institute of Molecular Agrobiology, National University of Singapore, 1 Research Link, Singapore 117604, Singapore. |
| − | </gbrowseImage2>| | + | |
| − | CDNA = <cdnaseq>atggagaagaagaaggtggcggtgccgctggtgtgccacggccactcgcgcccggtcgtcgacctgttctacagccccgtcacgcccgacgggtacttcctcatcagcgccagtaaggatgggaatccaatgcttcgtaatggtgagactggagattggattgggactttccaaggtcataaaggggctgtctggagctgctgcctagacacaaatgctctgcgtgctgcatctggttctgctgacttttcagccaaagtttgggatgcactaacaggtgatgagctacattcatttgaacacaagcacattgtccgtgcatgcgcgttttctgaggatacccacctgttgctcactggaggcgtagaaaagattttgcgtgtctatgatatgaatcgtccagatgcagcaccaagagaacttgacaaagcacctggtaacgtgcgaactgttgcttggcttcatagtgatcaaacaatactaagctcgtgctctgatatgggaggagtaagattgtgggatgtgaggactggaaaaattgtccaaactcttgaaaccaaggcgcctgtgactagcgcagaagtaagtcaagacagcaggttcatcactacagctgatggctcgagtgttaaattttgggatgctaatcactttgggcttgttaaaagctatgatatgccttgcactgtggagtcagcttccctggaaccaaaatctgggagcaaatttattgttgggggagaagatatgtgggttcatgtatttgatttcttcactggtgaagaaataacctgtaacaaggggcatcatggtcctgtccactgtgtccgctttgcacctggcggtgaatcttatgcatcaggatcagaagatggcaccatccggatctggcagctgagcccacctaacgctgatgacaatgaggcggtcaattcaaatggcaaaccaacagttggggtaaatgaggttgcacgcaagatcgaaggcttccacattcccaaggaggaggagcagcaggctgaggggtag</cdnaseq>|
| + | ==References== |
| − | AA = <aaseq>MEKKKVAVPLVCHGHSRPVVDLFYSPVTPDGYFLISASKDGNPM LRNGETGDWIGTFQGHKGAVWSCCLDTNALRAASGSADFSAKVWDALTGDELHSFEHK HIVRACAFSEDTHLLLTGGVEKILRVYDMNRPDAAPRELDKAPGNVRTVAWLHSDQTI LSSCSDMGGVRLWDVRTGKIVQTLETKAPVTSAEVSQDSRFITTADGSSVKFWDANHF GLVKSYDMPCTVESASLEPKSGSKFIVGGEDMWVHVFDFFTGEEITCNKGHHGPVHCV RFAPGGESYASGSEDGTIRIWQLSPPNADDNEAVNSNGKPTVGVNEVARKIEGFHIPK EEEQQAEG</aaseq>|
| + | <references> |
| − | DNA = <dnaseqindica>7534..7545#7298..7524#6342..6481#6108..6245#5826..6001#5350..5431#3836..3971#357..474#tcccctctccccccaaggctactcgcctagcgcccgccacctaggccgcggcctcatcccccccacctcttctgctcctctccccaataaaattccccgcacgaatcgatccccccctcggatccggatcgcctcgcccaccccctctccgccgctcgtcgatcgcgatttttttttcttcgccggatttttttttctcccgatcggtggggagggctctctctctctctctctctctctcttcaccctagggttagggggagcgccgccgcatttcggtccgccgccgccgccggagtcgaggagctagggttttcgtcggtcggggggggggaagaggtggggggttgagattgatggagaagaagaaggtggcggtgccgctggtgtgccacggccactcgcgcccggtcgtcgacctgttctacagccccgtcacgcccgacgggtacttcctcatcagcgccagtaagggtaagtgagcggcgatccgaccgcccgaccgcgatttgatgccgttttttttatggttttcctgctgcgattcgtctggatcgggggcggtgtgatctgatgccgccgcttttttagcgcgtggttctaatgtttgtgtgtattttttatatttttctgcggaggctatgttaatcgtgtgattttttaccgtgaaattgtggctacttttgtggagttcatgtctcgtgtattaatctagtttatgccgctgatcactgatgcagtttgggcatgattgctgtatgttgcgttgctagtcttctaatgcactatcttagtcatgatgaaatgtgttggttctatattattatttgttaatacgtgatcgtatgagtttattgtttgatatgtaatggtaggatatttgagcgtggttgtcaatggagtgtaccacaatgttactctttaacatacctagtgctgcatgttgcaatctagccggggtatgctatatttggacagccattttttctggttttaactcatatacgatgtgtgccaataagttgaggtgcgagaatgtttaacaatattggtagtcactcggtatgtgaccagagttttacaaggttgtaaattgggatagacggctgcctaggcaagtttactttgagcatgtgctatttggataggtggtgtctggccacaatatacttcctctgtcccaaaatgtagctacctagtgcagtacctagtccagattcgtagtacaagataacgtcatatcctgtactaggtagctacattttgggacggaggaagtaagtacatgttttaaacattgatcgtaacagtatagcaacatcttgccttctgtggtgcaatgttttatttaagacatctattcttagactggaagtgagctgtcaattctgaagaattaggcaggaccacctacttcattgatatttgtatgttgaactgaatcaaatatgccacagatcgttgatgcagtttgggcatgattgatgtaggttgccttgctagttttctaatgcgctgtcgtggtcatgcaatgtgttgattctgtgttgtttgttagtttggtcggaagtaggatgacagctgcactacatgatcacatgactttatcgttttatgtgtaatgggcaggatatttgttcaaaaaggagctagtcgatcggttgagtggcgcctagcaggtgcctaggtcagaccaaatagtcaaatccaagaaattagcaagcatattaaataaaaactagacttcattacactaaaatagcaacaaaataccacccaaggtagttcagctgcctaatgcaccatctaatgcctcattgccgtggctatcagaacactgcatggttgtggatagtgggtctggtgtacctcaatgacactctttaacatagctagtgctgcatgttgcaatatagctgggatatactataatgagtgggttgtatttagaggacagagccatttttctgaagtttcaatccatatatggcgggtgccaatatgttgaggtgatagaatgtgtaacaatatcggcagtcactcagtacgtagccagtgttctagaaggttgtgactagagctaagtcactgagtaagttgtggtagatggctgcctgggcaagtttactttgagcatgtgctattttgaagggtgatgtctagccacaatctaagcaatcatctttaaacattgataacagtataacaacatcttgccttctattgtgcaatgtttaatttcaggcctctattcttagactggaagtgagctgccaattctgaagaattaggcaggatcacctactttattgatattctttcaggaagtagttctttttgggggttaagataaggttatttatttgtttttcagacaatggaagaatgacattcggtctctacacctgaaggtgtacacagctgtgtcatgatgaagttttgcgacaatcgaccttattgatctataaaaaacacgacagttaaagcatccaattgattacaaagccaattaagctaccatccataactccatgatttgctccaaacatttgctcactgcaatggacactaattagtgctctttgcgttgaagtagagaccagaatcacaaccagttggagcacatgaaattactgtataggattaacatttttctttttgttaaatgcaatgtcattaggacaaagccaaatagaccaaaaaagggaggctatatagacaaattgattgtaacgtgcgaggtcatttaatgaatctgcaaataagtaaaccttatcggttatatactttgggcatcatgtgcccagggttttgagcaaatctaacatggttgggtattagcaaaacaagtggtagtatgaggacccatcatttttgtcataatagcatttttggctcattattgatatcgcttattattagcagggagttgcatatgcctagtgcatatggctgattagttggactaggcgacaacctagacatgctaagcattgactaggcagctagattctatgtagaatggtgatgcataggcacaaccacttttcgaatgatgcttgtaactataaagcaatgtacgagctatattgttcaaccctatgtgttggaagctagctgccctttttggccacaaacacctacttcatttatatttcctatgttggtaacactgtttccgggttgcttggacatatgtagaaggtagttaatgctttgttggagtggtagttaatatagtttgattaaggaggagatccttgtaaaagctgcatatttgtatccatgattcgaaacaagacaggaaactagcgtgtgttctgtcatagctgttgccttgttgccatttcatttttggagggttaggtttaattcatgtttattagtatatggaattacataattgcattatatgctctaggttttcctccatgggataatatgtatagcaagcgccaaccattcaatgctttaaatacggcataacaatcagctgctaataccttctttttgatacaagtcttagtgttgagctttggcatgatgactaatgtagtaactaaatgactttagttttacttgagaacttagtgcaaaatgctaacatttgagaagagcaccataccctgtcatagggtttgtgcgaactttgattagtattacttttggtctgaactacactgacttcactttgcaatgcattgtagaaatctaattgttttttagattgatgtttattatacaaaaactaatttgggtataaatctaattgttttttagattgatgtttattatacaaacactaatttggtaatattgtatgttttgatcttagatgggaatccaatgcttcgtaatggtgagactggagattggattgggactttccaaggtcataaaggggctgtctggagctgctgcctagacacaaatgctctgcgtgctgcatctggttctgctgacttttcagcgtatgacattcaccctatgaaatttcagtggtgtctattttaattatttatctttgacaaaaatggaatgtgcatgcattcagtgtatttatatttttattacaattttttttcatccagacgtgctacttgcaggtgtaattataatatattatagttcagttctgaatgttcatggtatctagtgtatttcttttttgcctttggaaaagaatccatcaaaaacttcagatgatgtaatatttgttcaaagcttgatttttacttaattttctctagatgagaagaaaaatgattgttatggatctagtcattaataacacatattcttaaactcgtaataaacatataagcatagtttagctttagcatagcactgttcgccttgcagaaattactgaggataaaaactgaatttgttatttctgctttcttccaaatcttgtgtttctgcgtaccattttgattcttttttgcagcatggagaattggatcttaagtatgtttcaaaatgaatataaatatcagcactgagagttctccaaagtgctttagacttgcttattttgtgttctctgctcttgattacattcatgaaataccaaaacataatggattgattactcaacataaaggttatgtggaaccaaaggaaatctgcatctcatatactccctccaaaagtctaagacattattttattttctggtttttccaaatgagttgggcatatttgtagtctctatgtactaaattaaattgttgacctgaacccaagcagccatcttaatactcattggttgcatgcattcatctagttccttggttttgtcacatggggtggatgagttaattcctccttggtcttggtgacaaaaaaaatatgccttagacttttggatagagggagtaatataaaacaatatgccattaatttgtgcctaaaagagtagaggatgcttgaagctcaattttggcatgaagatttgcatagtaaaacaattttgtaattttagcacatggcttacagattagtatgttgaggagtttggaattatggagaatttatggtgtatcctgaagttggtggttgtgcataaattagttatgaatgattgaacgtaaggtacacccataagtcatctcgtgaatgtgatctacagtaggatgctgttttgcaattctaagttgcaacatttagaattctaagttgtgatctacagcataatatatgttggttttgaggccttgcaacacaaataaataacagattgttgctgctcaactaatattctagtccttgagttagtacttacgagttatgtccattacaagtttattttgctcttataatagatgtatgttgatttttttccagcaaagtttgggatgcactaacaggtgatgagctacattcatttgaacacaagcacattgtccgtgcatgcgcgttttctgaggtaatgcttccagaatgttttaatcatcagtgctagctttgtggattttctctttctaccctatagaaagtgtatgctgtccttcttttctttgaatatttttccagacactctggactgttaaactaaggtctggtggccttatgcctgtgcacagatcatggactgtcttaatgaaaatgtatataccaaccttctgatatcagtatttaatcacttgctatgaaccaagtatttaatcacttacaattaactaagtgtatatcagtatatccatgtaactgttatagcttcttgctaccttatctgcagtatgttgcagcatttaatttcaaaataatgctgtcctttgtgagcagtttgaaatctaattaaatggccattggcgctgtaggatacccacctgttgctcactggaggcgtagaaaagattttgcgtgtctatgatatgaatcgtccagatgcagcaccaagagaacttgacaaagcacctggtaacgtgcgaactgttgcttggcttcatagtgatcaaacaatactaagctcgtgctctgatatgggaggagtaaggtgtgtctggaaaaaatatcttcattctataggaagagctgctaccatttgttcctagtttattgtaattttgttcctcttatttaattgttatggcactgcacagattgtgggatgtgaggactggaaaaattgtccaaactcttgaaaccaaggcgcctgtgactagcgcagaagtaagtcaagacagcaggttcatcactacagctgatggctcgagtgttaaattttgggatgctaatcagtacgtattatttctatcatcattataccgttgttctgtgtcatacaaaattattaaatcctttgcaacaaacattttttgctggttattttgcagctttgggcttgttaaaagctatgatatgccttgcactgtggagtcagcttccctggaaccaaaatctgggagcaaatttattgttgggggagaagatatgtgggttcatgtatttgatttcttcactggtgaagaaataagtaagcattatatatttttcattcacttgtccttcaaactttaatgcagtttttcttttcaaaatgagaacattacgttccactgttgtggcttgaagagcatttaaacatgttgaacaactgtaacatactattatttgcttagatactgacctcaaggcttgattgcaactgataatgtgtagctaaaatcctgtgttcagaagttgggtcgtacttgtacttagaatttctaacagtccttgcacatttatgataacagttatgcaggggacagtcgtttccactgttgcagtaactagcttatcgtgggaaccatgagtcactagtgtgatcaaacaaatatttttctaacttttttgccctccattaattaatgcataatggatatgaaataaataattcaaatttcaaaaagtttgacccaaagcttgtcctaaatatcaaattttatgactggaaggagtacatggcattgccatgctttttttgtcatatagttgcactagttttatttcagtcctaacctttaggaacaatttcctactttagttgctcggctctttgtacttgtattatactccctccatttccttttgtttgacgttgaactaaccacgtcatacatttggaaatagaggtagtatattgtgtaacctttttaatagttttttcggtgggatatttctttgggaaattgtagaattgttcaaatcagaaattccaattctctttaatcatactgacaaatggcttttatttcattgtaatctctgttccaattaagctgattgttttttttttaacaatgtgcagcctgtaacaaggggcatcatggtcctgtccactgtgtccgctttgcacctggcggtgaatcttatgcatcaggatcagaagatggcaccatccggatctggcagctgagcccacctaacgctgatgacaatgaggcggtcaattcaaatggcaaaccaacagttggggtaaatgaggttgcacgcaagatcgaaggcttccacattcccaaggaggaggagcagcagcagcagcaggctgaggggtaggactacaaggttggcaaacatggcagtgcttggtgcttactgggagatgattgcttgtcgatgctcctctccttcccgtttctcccttgctttgttgatgcccttggttcccgacgcaaggggggagagatcttgtcctccgtgaccaaaacggtggatttctgtatggggccctcaccaaatagacagtgtcagggtagtatctatctacagtgccaaaataaaccaagaggaaagcaagttggtagtttagtatcgttgattgcattcacagaagtgaaagtcttgtattccgctggtggccgtgatacagcagatgccattgtgttcaccggtttttgcctcccctacccttctatggactcttttcttatcaggaattgcttctttttattattgccgctgttttgacttctgatgc</dnaseqindica>|
| + | * <ref name="ref1"> |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064532.1 RefSeq:Os06g0598900]|
| + | Gu K, Yang B, Tian D, et al. R gene expression induced by a type-III effector triggers disease resistance in rice[J]. Nature, 2005, 435(7045): 1122-1125. |
| − | }}
| + | </ref> |
| − | [[Category:Genes]] | + | </references> |
| − | [[Category:Japonica mRNA]]
| + | |
| − | [[Category:Oryza Sativa Japonica Group]] | + | |
| − | [[Category:Japonica Genes]]
| + | ==Structured Information== |
| − | [[Category:Japonica Chromosome 6]] | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]] |
| − | [[Category:Chromosome 6]]
| |
