Difference between revisions of "Os11g0592900"

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(Created page with "{{JaponicaGene| GeneName = Os11g0592900| Description = Thioredoxin domain 2 containing protein| Version = NM_001074729.2 GI:297612111 GeneID:4350830| Length = 2529 bp| De...")
 
(Annotated Information)
 
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{{JaponicaGene|
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The rice '''''Os11g0592900''''' was reported as '''''BGL11(t)''''' in 2013 <ref name="ref1" /> by researchers from China.  
GeneName = Os11g0592900|
 
Description = Thioredoxin domain 2 containing protein|
 
Version = NM_001074729.2 GI:297612111 GeneID:4350830|
 
Length = 2529 bp|
 
Definition = Oryza sativa Japonica Group Os11g0592900, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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[[File:133-Os11g0592900.png|right|thumb|227px|'''Figure 1.''' ''Plant phenotype of the bgl11 mutant and its wild-type parent.<ref name="ref1" />.'']]
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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===Gene Symbol===
            clade; Ehrhartoideae; Oryzeae; Oryza.
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*'''''Os11g0592900''''' '''''<=>''''' '''''BGL11(t)'''''
|
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===Function===
Chromosome = [[:category:Japonica Chromosome 11|Chromosome 11]]|
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* '''''BGL11(t)''''' is a novel gene regulating leaf-color mutation in rice
AP = Chromosome 11:24408598..24411126|
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CDS = 24408718..24408891,24410581..24411048|
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===Phenotypic analysis===
GCID = <gbrowseImage1>
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* The bgl11 mutant exhibited a distinct bright-green leaf phenotype throughout development (Fig. 1). At the maturity, the number of productive panicles per plant and seed setting rate of bgl11 mutant reduced by 8.7 and 9.3 % to its wild-type parent, respectively.  
name=NC_008404:24408598..24411126
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* However, the other major agronomic traits of bgl11 mutant, including the plant height, panicle length, number of spikelets per panicle, and 1,000-grain weight were not affected remarkably compared with its wild-type parent
source=RiceChromosome11
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preset=GeneLocation
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You can also add sub-section(s) at will.
</gbrowseImage1>|
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GSID = <gbrowseImage2>
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==Labs working on this gene==
name=NC_008404:24408598..24411126
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* Institute of Applied Chemistry, Zhejiang Agriculture and Forestry University, Lin’an 311300, Zhejiang, China
source=RiceChromosome11
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* College of Resources and Environment, Hunan Agricultural University, Changsha 410128, Hunan, China
preset=GeneLocation
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* School of Forestry and Biotechnology, Zhejiang Agriculture and Forestry University, Lin’an 311300, Zhejiang, China
</gbrowseImage2>|
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CDNA = <cdnaseq>atgggcgccgccgcgaagcccccacccttcgtctgcttcaagtggccatggggccccgaccccaaggcaacgagccctagccctagcccgagcccctgcggcgacctcgagatgccctggctgctcaagtccatccgcaccgtggcgcagggcctcctcatcgccggcgacctcccctccccctcgtcggacgggggaggaggcggcggtggggcgaggacgaggtggaggaggaggaggcggctgggccctgggctggcggcggaggcggaccgcggggaggcggagcagcgggcgctcgcggcagcgctggcgagcgggagggacgcgaccgtgctggagttctactcgccccggtgccgcctgtgctcgtcgctgcaggggctcgtgcgcgagctcgaggacggcgcaggcgggcgggccggcttcgtgctcgccgacgccgaggacgaccggtggctccccgagcttctgcattacgacatcagatatgtcccgtgctttgtgcttcttgacaagaatggacgagccttagcaaagactggcgtaccgactagcaggcagcacgtcatcgctggccttcatcaccttcttaacatgaatcagatatctgtgcaagaaggaacgaagagcacggcatga</cdnaseq>|
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==References==
AA = <aaseq>MGAAAKPPPFVCFKWPWGPDPKATSPSPSPSPCGDLEMPWLLKS                    IRTVAQGLLIAGDLPSPSSDGGGGGGGARTRWRRRRRLGPGLAAEADRGEAEQRALAA                    ALASGRDATVLEFYSPRCRLCSSLQGLVRELEDGAGGRAGFVLADAEDDRWLPELLHY                    DIRYVPCFVLLDKNGRALAKTGVPTSRQHVIAGLHHLLNMNQISVQEGTKSTA</aaseq>|
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<references>
DNA = <dnaseqindica>2236..2409#79..546#gcggtccattcatcaacccacgtcatcgcccaatccgcagccgccgccgcctcgccggcgcttccctcgccggagaggatgggcgccgccgcgaagcccccacccttcgtctgcttcaagtggccatggggccccgaccccaaggcaacgagccctagccctagcccgagcccctgcggcgacctcgagatgccctggctgctcaagtccatccgcaccgtggcgcagggcctcctcatcgccggcgacctcccctccccctcgtcggacgggggaggaggcggcggtggggcgaggacgaggtggaggaggaggaggcggctgggccctgggctggcggcggaggcggaccgcggggaggcggagcagcgggcgctcgcggcagcgctggcgagcgggagggacgcgaccgtgctggagttctactcgccccggtgccgcctgtgctcgtcgctgcaggggctcgtgcgcgagctcgaggacggcgcaggcgggcgggccggcttcgtgctcgccgacgccgaggacgaccggtggctccccgaggtgaggcgccttcacccgactgcattgctctgcgcccccatagatttgtgattgatgatttgggcgttagtttccaactttgagggtgccttcgcgatgacatgtttgtgagatgagtcatgagattgttctcctggttctaattttaagatgagatgatttgctagcgtgtgcattgattggtagaaaataaatatgtcatgttcataggttctatggtaaaattgagacttgggccgttgattaatttgtgagacatgtgctgtaatcctgctttagaatgatcgttgatggcttcgcatcctggcttaactctatctataatgcttcaagttgtgtgaattgtgcattggaaattgctactttaggtgcaattcaagttgtgtgaattgtgcattggaaattgctgctttaggtgcaatctttgtgtaggaaactaccaattttgtgtcttcagtggttaagtcgtttattgccattgattaatgtattaatgagttgtctacagtgaaaaagtggggggttagaggacctcctcactgtagataatgtacatgtaacttatgcccaatagtcataatcaatcgtggacttgtcttggtgttgtttatcttgatctggggactaaagtgttctaccatcatgtggtgctttcctgttattaactgtcttggtgaaaattcattacaattgttatgtgttacagtggagctcaattaaatcgctagcgtcaactttgggctgtgatagtaacaagtagttgtgctctgtgttggatttcttttgaaaattgttaagtagtatgcgtttctcagatttttcatatggagtaaatagttgaaggattgctaaacttttagggtttaagtctgtcatgtaaggttgttgaacaagattcagcttgcaggtttcctgttattatctctttgtatgtatgtgtacatacaaagagacatggccgtaggttcttctgaaagtgtaggggctctaatttttagttttataaaaattgatgtatacacatatgcaaagaatatcttggactcagatactaaaaatgttatttttcactgaagttcacgtaaacaacaaaagtaccacgactatggacagctaaaagttctgaaaaattgtaaaatccttagtaaataactaactatacatataagctgttgtattcatctccttgctaccccttgctgctgcttgtcaacacatgatggctgggcacatgatgggctactagcctactagaccatagttttcatggtatattggtatctagtatcttgcatttgtacttacattttgtatcctggctggtttcctttttctactctcctaaccttttctatatttgtttggctatccaacaacaacttcttttatgcctgctttctcattttcttttatgccttaacgaaccatggttggttatggtgtcatgttgtacttgccctgttactgaaccattgtatctgctagctactagtaatctatctctagttgtttgacaaacgttttgtcgcaagacatggtaactgaccaagcatatgaaagatgttagcactttccgcatacacgtgggagctgtatgcctgtattcctgtcatagtattgccatatctcacatacacatgttgagttgtttccagtttctaacagcaacatttcttcgtacattttcagcttctgcattacgacatcagatatgtcccgtgctttgtgcttcttgacaagaatggacgagccttagcaaagactggcgtaccgactagcaggcagcacgtcatcgctggccttcatcaccttcttaacatgaatcagatatctgtgcaagaaggaacgaagagcacggcatgatgaagttccttacttccttgagcaagtcatgtaattgttgataagagtgtcagaattcagatagtgcatggttaccaagcatgacgatcaacaatgctgaaaaaatcttatttcttttcc</dnaseqindica>|
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* <ref name="ref1">
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001074729.2 RefSeq:Os11g0592900]|
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Wang, Zhi-kun, et al. "Identification and characterization of BGL11 (t), a novel gene regulating leaf-color mutation in rice (Oryza sativa L.)." Genes & Genomics 35.4 (2013): 491-499.
}}
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</ref>
[[Category:Genes]]
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</references>
[[Category:Japonica mRNA]]
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[[Category:Oryza Sativa Japonica Group]]
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==Structured Information==
[[Category:Japonica Genes]]
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]]
[[Category:Japonica Chromosome 11]]
 
[[Category:Chromosome 11]]
 

Latest revision as of 15:55, 19 October 2016

The rice Os11g0592900 was reported as BGL11(t) in 2013 [1] by researchers from China.

Annotated Information

Figure 1. Plant phenotype of the bgl11 mutant and its wild-type parent.[1].

Gene Symbol

  • Os11g0592900 <=> BGL11(t)

Function

  • BGL11(t) is a novel gene regulating leaf-color mutation in rice

Phenotypic analysis

  • The bgl11 mutant exhibited a distinct bright-green leaf phenotype throughout development (Fig. 1). At the maturity, the number of productive panicles per plant and seed setting rate of bgl11 mutant reduced by 8.7 and 9.3 % to its wild-type parent, respectively.
  • However, the other major agronomic traits of bgl11 mutant, including the plant height, panicle length, number of spikelets per panicle, and 1,000-grain weight were not affected remarkably compared with its wild-type parent

You can also add sub-section(s) at will.

Labs working on this gene

  • Institute of Applied Chemistry, Zhejiang Agriculture and Forestry University, Lin’an 311300, Zhejiang, China
  • College of Resources and Environment, Hunan Agricultural University, Changsha 410128, Hunan, China
  • School of Forestry and Biotechnology, Zhejiang Agriculture and Forestry University, Lin’an 311300, Zhejiang, China

References

  1. 1.0 1.1 Wang, Zhi-kun, et al. "Identification and characterization of BGL11 (t), a novel gene regulating leaf-color mutation in rice (Oryza sativa L.)." Genes & Genomics 35.4 (2013): 491-499.

Structured Information