Difference between revisions of "MADS"

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(Created page with "==Brief Introduction== * MADS-box family member are known to be involved in many important processes during plant growth and development<ref name="ref1" /><ref name="ref2" /><...")
 
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[[File:mads_box1.jpg|center|thumb|1000px|'''Figure 1.''' ''Protein Structure of '''BGIOSGA004940''' '']]
 
[[File:mads_box1.jpg|center|thumb|1000px|'''Figure 1.''' ''Protein Structure of '''BGIOSGA004940''' '']]
 
* The best studied plant MADS-box transcription factors are those involved in floral organ identity determination. Combinations of A-, B-, and C-function genes determine the development of the four whorls of an Arabidopsis flower: A-function genes determine sepal development; A- and B-function genes determine petal development; B- and C function genes determine the stamen development, and C-function genes are necessary for carpel development<ref name="ref2" /><ref name="ref3" />.
 
* The best studied plant MADS-box transcription factors are those involved in floral organ identity determination. Combinations of A-, B-, and C-function genes determine the development of the four whorls of an Arabidopsis flower: A-function genes determine sepal development; A- and B-function genes determine petal development; B- and C function genes determine the stamen development, and C-function genes are necessary for carpel development<ref name="ref2" /><ref name="ref3" />.
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==''Japonica'' Group==
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{| style="background:#A1A3A6; width:85%;" border="0"
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|-style="background:white; color:black" align="center"
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!
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'''[[Os01g0201700]]'''
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||
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'''[[Os02g0682200]]'''
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||     
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'''[[Os04g0580700]]''' 
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|| 
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'''[[Os09g0507200]]'''
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'''[[Os08g0531700]]'''                           
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|-style="background:white; color:black" align="center"
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!
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'''[[Os07g0605200]]'''
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'''[[Os07g0108900]]''' 
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'''[[Os05g0203800]]''' 
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'''[[Os12g0207000]]'''
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'''[[Os03g0752800]]'''
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|-style="background:white; color:black" align="center"
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! 
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'''[[Os03g0122600]]'''
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||
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'''[[Os10g0536100]]'''
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'''[[Os06g0162800]]'''
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'''[[Os01g0883100]]'''
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||
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'''[[Os01g0886200]]'''
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|-style="background:white; color:black" align="center"
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!
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'''[[Os04g0461300]]'''
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'''[[Os06g0712700]]'''
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'''[[Os02g0731200]]'''
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'''[[Os03g0215400]]'''
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||
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'''[[Os02g0579600]]'''
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|-style="background:white; color:black" align="center"
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! 
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'''[[Os12g0206800]]'''
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||
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'''[[Os08g0531900]]'''
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||
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'''[[Os03g0753100]]'''
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||
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'''[[Os05g0203600]]'''
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||
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'''[[Os02g0170300]]'''
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|-style="background:white; color:black" align="center"
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! 
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'''[[Os02g0761000]]'''
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'''[[Os04g0614100]]'''
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'''[[Os05g0423400]]'''
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'''[[Os08g0431900]]'''
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||
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'''[[Os04g0304400]]'''
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|-style="background:white; color:black" align="center"
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! 
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'''[[Os06g0223300]]'''
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||
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'''[[Os06g0667200]]'''
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'''[[Os06g0217300]]'''
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'''[[Os03g0186600]]'''
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'''[[Os01g0922800]]'''
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|-style="background:white; color:black" align="center"
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! 
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'''[[Os12g0501700]]'''
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||
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'''[[Os08g0112700]]'''
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'''[[Os01g0726400]]'''
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||
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'''[[Os12g0407400]]'''
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||
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'''[[Os11g0658700]]'''
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|-style="background:white; color:black" align="center"
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! 
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'''[[Os04g0387400]]'''
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'''[[Os03g0253400]]'''
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||
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||
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|}
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==''Indica'' Group==
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{| style="background:#A1A3A6; width:85%;" border="0"
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|-style="background:white; color:black" align="center"
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!
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'''[[BGIOSGA002178]]'''
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||
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'''[[BGIOSGA008820]]'''
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'''[[BGIOSGA016980]]''' 
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'''[[BGIOSGA031056]]'''
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'''[[BGIOSGA029052]]'''                           
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|-style="background:white; color:black" align="center"
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!
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'''[[BGIOSGA026097]]'''
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'''[[BGIOSGA018621]]''' 
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'''[[BGIOSGA024961]]''' 
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'''[[BGIOSGA009798]]'''
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'''[[BGIOSGA033356]]'''
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|-style="background:white; color:black" align="center"
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! 
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'''[[BGIOSGA021849]]'''
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||
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'''[[BGIOSGA000377]]'''
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'''[[BGIOSGA004940]]'''
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'''[[BGIOSGA020546]]'''
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||
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'''[[BGIOSGA007336]]'''
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|-style="background:white; color:black" align="center"
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!
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'''[[BGIOSGA011213]]'''
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||
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'''[[BGIOSGA026745]]'''
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'''[[BGIOSGA008494]]'''
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'''[[BGIOSGA022872]]'''
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'''[[BGIOSGA036463]]'''
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|-style="background:white; color:black" align="center"
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! 
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'''[[BGIOSGA009797]]'''
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'''[[BGIOSGA026939]]'''
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'''[[BGIOSGA008983]]'''
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'''[[BGIOSGA007056]]'''
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'''[[BGIOSGA018624]]''
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|-style="background:white; color:black" align="center"
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!
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'''[[BGIOSGA007333]]'''
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'''[[BGIOSGA009093]]'''
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'''[[BGIOSGA022154]]'''
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'''[[BGIOSGA019900]]'''
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'''[[BGIOSGA016106]]'''
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|-style="background:white; color:black" align="center"
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!
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'''[[BGIOSGA029053]]'''
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'''[[BGIOSGA017110]]'''
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'''[[BGIOSGA003731]]'''
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'''[[BGIOSGA016105]]'''
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'''[[BGIOSGA005076]]'''
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|-style="background:white; color:black" align="center"
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!
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'''[[BGIOSGA015021]]'''
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'''[[BGIOSGA023435]]'''
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'''[[BGIOSGA021662]]'''
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'''[[BGIOSGA011317]]'''
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'''[[BGIOSGA036149]]'''
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|-style="background:white; color:black" align="center"
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!
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'''[[BGIOSGA027872]]'''
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'''[[BGIOSGA007600]]'''
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'''[[BGIOSGA000892]]'''
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'''[[BGIOSGA018453]]'''
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'''[[BGIOSGA006672]]'''
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|-style="background:white; color:black" align="center"
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!
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'''[[BGIOSGA030217]]'''
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'''[[BGIOSGA005284]]'''
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'''[[BGIOSGA035654]]'''
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'''[[BGIOSGA021177]]'''
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||
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'''[[BGIOSGA003304]]'''
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|-style="background:white; color:black" align="center"
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!
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'''[[BGIOSGA036334]]'''
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||
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'''[[BGIOSGA022830]]'''
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||
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'''[[BGIOSGA028419]]'''
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||
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'''[[BGIOSGA018341]]'''
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||
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'''[[BGIOSGA015023]]'''
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|-style="background:white; color:black" align="center"
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!
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'''[[BGIOSGA000269]]'''
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'''[[BGIOSGA003303]]'''
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'''[[BGIOSGA011095]]'''
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'''[[BGIOSGA016270]]'''
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'''[[BGIOSGA003441]]'''
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|-style="background:white; color:black" align="center"
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!
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'''[[BGIOSGA002989]]'''
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'''[[BGIOSGA034252]]'''
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'''[[BGIOSGA030219]]'''
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'''[[BGIOSGA000297]]'''
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'''[[BGIOSGA003442]]'''
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|-style="background:white; color:black" align="center"
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!
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'''[[BGIOSGA003440]]'''
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'''[[BGIOSGA003443]]'''
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|}

Revision as of 00:59, 14 May 2013

Brief Introduction

  • MADS-box family member are known to be involved in many important processes during plant growth and development[1][2][3]. The word MADS finds its origin from the first letters of its founding members, Mini Chromosome Maintenance 1 (MCM1) of yeast (Saccharomyces cerevisiae), Agamous (AG) of Arabidopsis (Arabidopsis thaliana), Deficiens (DEF) of snapdragon (Antirrhinum majus) and Serum Response Factor (SRF) of humans (Homo sapiens)[1].
  • They are characterized by the presence of a conserved domain of approximately 60 amino acids located in the N-terminal region; this domain is named the MADS-box domain and is involved in DNA binding and dimerization[1][2][3]. The MADS-box family has been divided into two main groups. The type I consists of ARG80/SRF-like genes of animals and fungi, also designated as M-type genes in plants, and type II contains MEF2-like genes of animals and yeast as well as MIKC-type genes of plants[1][3].
Figure 1. Protein Structure of BGIOSGA004940
  • The best studied plant MADS-box transcription factors are those involved in floral organ identity determination. Combinations of A-, B-, and C-function genes determine the development of the four whorls of an Arabidopsis flower: A-function genes determine sepal development; A- and B-function genes determine petal development; B- and C function genes determine the stamen development, and C-function genes are necessary for carpel development[2][3].

Japonica Group

Os01g0201700

Os02g0682200

Os04g0580700

Os09g0507200

Os08g0531700

Os07g0605200

Os07g0108900

Os05g0203800

Os12g0207000

Os03g0752800

Os03g0122600

Os10g0536100

Os06g0162800

Os01g0883100

Os01g0886200

Os04g0461300

Os06g0712700

Os02g0731200

Os03g0215400

Os02g0579600

Os12g0206800

Os08g0531900

Os03g0753100

Os05g0203600

Os02g0170300

Os02g0761000

Os04g0614100

Os05g0423400

Os08g0431900

Os04g0304400

Os06g0223300

Os06g0667200

Os06g0217300

Os03g0186600

Os01g0922800

Os12g0501700

Os08g0112700

Os01g0726400

Os12g0407400

Os11g0658700

Os04g0387400

Os03g0253400

Indica Group

BGIOSGA002178

BGIOSGA008820

BGIOSGA016980

BGIOSGA031056

BGIOSGA029052

BGIOSGA026097

BGIOSGA018621

BGIOSGA024961

BGIOSGA009798

BGIOSGA033356

BGIOSGA021849

BGIOSGA000377

BGIOSGA004940

BGIOSGA020546

BGIOSGA007336

BGIOSGA011213

BGIOSGA026745

BGIOSGA008494

BGIOSGA022872

BGIOSGA036463

BGIOSGA009797

BGIOSGA026939

BGIOSGA008983

BGIOSGA007056

'BGIOSGA018624

BGIOSGA007333

BGIOSGA009093

BGIOSGA022154

BGIOSGA019900

BGIOSGA016106

BGIOSGA029053

BGIOSGA017110

BGIOSGA003731

BGIOSGA016105

BGIOSGA005076

BGIOSGA015021

BGIOSGA023435

BGIOSGA021662

BGIOSGA011317

BGIOSGA036149

BGIOSGA027872

BGIOSGA007600

BGIOSGA000892

BGIOSGA018453

BGIOSGA006672

BGIOSGA030217

BGIOSGA005284

BGIOSGA035654

BGIOSGA021177

BGIOSGA003304

BGIOSGA036334

BGIOSGA022830

BGIOSGA028419

BGIOSGA018341

BGIOSGA015023

BGIOSGA000269

BGIOSGA003303

BGIOSGA011095

BGIOSGA016270

BGIOSGA003441

BGIOSGA002989

BGIOSGA034252

BGIOSGA030219

BGIOSGA000297

BGIOSGA003442

BGIOSGA003440

BGIOSGA003443

  1. ↑ 1.0 1.1 1.2 1.3 Cite error: Invalid <ref> tag; no text was provided for refs named ref1
  2. ↑ 2.0 2.1 2.2 Cite error: Invalid <ref> tag; no text was provided for refs named ref2
  3. ↑ 3.0 3.1 3.2 3.3 Cite error: Invalid <ref> tag; no text was provided for refs named ref3
Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=MADS&oldid=167096"