Difference between revisions of "Os01g0907400"
(Created page with "{{JaponicaGene|
GeneName = Os01g0907400|
Description = Transcription factor jumonji, JmjN domain containing protein|
Version = NM_001051672.1 GI:115441714 GeneID:4324980|
...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0907400| | GeneName = Os01g0907400| | ||
Revision as of 19:04, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0907400 |
|---|---|
| Description |
Transcription factor jumonji, JmjN domain containing protein |
| Version |
NM_001051672.1 GI:115441714 GeneID:4324980 |
| Length |
6766 bp |
| Definition |
Oryza sativa Japonica Group Os01g0907400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:41249020..41255785 |
| Sequence Coding Region |
41249141..41250014,41250112..41250190,41250541..41250608,41251198..41251348,41252162..41252742 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:41249020..41255785 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:41249020..41255785 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaggccctcgccgcctcccgccgccccggcggcggaaccggtgcccccgtggctgagatcgctgcccgtcgcgcccgagttccgccccaccgccgccgagttcgccgatcccgtctcctacatcctcaagatcgagcccgccgcggcgccgtacggcatctgcaaggtcgtgccgccgttgcccccgccgccgaagaaggccaccttctccaacctctcccgctccttcgccgcgctccacccggacgaccgctcgccgtccttccccacccgccaccagcaggtcggcctctgcccgcgccgcacgcgcccggggctcaagcccgtgtggcggtcctcccaccgctacacgctcccgcagttcgagtccaaggccggcgccacccgcaagtcgctcctcgccggcctcaacttccctgcctccaggcaactcaccccgctcgaccacgaggtgctcttctggcgcgcatcggccgaccgccccatcgtggtcgagtatggcagcgacatgtcgggctcgggattctccccttgcgccgcgcagccgcagccgccgccgcagcagcaaccgacggcgcgggcggcggcgcaccttggggagacggcgtggaacatgcgcggcgtggctaggagccccggatcgctgctgcggttcatgccggaggatgtccccggggtcaccacgccgatgctctacgtcgggatgatgttcagttggttcgcgtggcacgtcgaggaccacgacctgcacagcctcaactacatgcacctcggggccgccaagacgtggtacggcgtgccgcgcgacgccgcgctcgcgttcgaggacgtggtgcgcgaacatggctacggcggggaggtgaaccccctagaaaccttcgctacattggggcagaaaacaacagtgatgtcccctgaagtgcttgtggagtcgggtatcccctgctgcagattggtgcagaatgcaggggaatttgtggtcacttttccaggatcttatcactgcggtttcagtcatggattcaactgtggggaagcatcaaatatagctactcctgaatggttgagaatagcaaaagaggcagcaatccgaagagcttcaatcaatcgtcctcccatggtttcgcactatcaattactttacgatctcgcactgtctatgcgttttagggaaccatccaatggtgaaatggagacacggagctctcgaataaaggagaagaagaaatgcgaaggggaacaactggtcaagaagatgttcatccaaaatgttattgaagataatgaactgcttagtcatcttctaaatgacggatcatcttgtattattcttccagcaaatgcccatgatggtcctggtctttctactttgcgctcaacagatcaatcaaatatgaattccagaatatcacataacctatgcagtagggaagaagctccagaagcctcaggatgcttatcgccgaacaggaatggtgataccagaaattgtatttcatcagatacgcataacatggaaggtgataagggagatataatgagcgctactggattgttagatcagggtctattatcatgtgtcacttgtggaattttaagtttttcatgtgtggctgtactcaaaccaagagattctacagcacgatacttgatgtctgctgattctaattcaattaataaccagctttctatttctggagggagtattctggcagatgcgccaacaaatgaaaggaatggtgtcatttctcgtccatattctgaacactgttgcaacgaaataatggccgatgatgcagaaatcgataagaattctgctcttgatctcttggcatttgctcatgggggtcaaccagatcctgaagaagatccactggagaaaatactgaagattgcacatggcattaacaaatcacaacctaatagttcaaataatgttggttgtgttggaacaaagctgtcctcaagtagcacagagcgccaagaaagaccatcttcccagaacgctcattgtaatggtagctcagttatttcaaatggaccgaaaggtgttcgcacgagaaataagtatcaacttaagatggtactttctgaaggttttcaggcaaaggatatctattctgcgaaggaaaagaaggttcaatcagaaccatcaagctcaaaaggggatgttaaggagacaattgatgttagtggcacagagaacgatgtcggatgtaaaagcactacaatctctgtcagtgaacacaggggttctacaaagaatatgtattcagtgaaggaaaagaaggttcaatcgaaaccatcaagcttaaaggggactgttaaagagacagttgatgtcagtggcacagagaacgatgctagatgtaaaagcattacaatctctgtcagtgaacacaggggttctacacctatgaccaatagtttagctgcatcaatcgtgaaacctgacaaggattcatcaagaatgcatgtattttgtcttgagcatgctattgaggttgagaagcaactgcatgctataggtggttctaatattatgcttatatgtcgtccagaatatcccaaaatagaagcggaagcaagattgttgggtgaagaaatgggactggtatatgactggaagggcattcatttcaaggaggccaacatggaggacaggcagaagatacaggaagttctgcgggatgaggaagcaatacctacaagcagtgattgggctgtaaaattgggtattaacctttattatagtgcaaatctggccaaatctcctttatataacaaacaaatgccatacaacagagtcatttatagggcatttggctgtgattctcctaatgactcgccagtaatgttcaatacttgcgaaaggaaacaaagccaccagaagaaaatagtggttgctggccggtggtgtgggaaagtatggatgtcaaaacaggtccatccatacttggctcacagagttgaaagccaggaagcggaagaagcagatagaatctgttcttatcattttgatgagaagcacaaagctgagccagttgggaattctagtagagtggaagcctccaaaagaaagagtagcagtttgacagacgtaacagaatcaagcaatagaaggggggaaatacctggtgaggaaacaaacaccaagaggcccaaacattctcaagagaacaatctcagagctttggaaaccgctgctgaagttgtggtgccctcaccagctggaacaggtctccgcgttagctccaggattgccaacagggcaaacaagctaaaatcaaagatggaaaaggaggatgtcccttctagccgtccaaagtctaacataaaggagaaaagcagtcatgctagcggtcagaaatcaaatgttcaagaggcgaatgctaattctgctagccatttgagagcaatgccaccaaaacagaaggctgaagcagaagcaaagaagcaaataagaactccaaaacctccaaagcaagcagtggagtactcgtgcgatattgagggttgttctatgagttttcgtacaaagcgggacttgtctctgcacaagagtgatatctgcccagtgaaaggctgcgggaagaagttcttctcgcacaagtatctgctgcagcatcgcaaggttcacacagatgaccgtccgctaacatgcccatggaagggctgcaacatggcattcaagtggccatgggcaaggactgaacatctcagggttcatacaggcgacaggccctatgtttgccatgagccaggttgcgcacagacattcaggtttgtctcagatttcagccgtcacaagcgcaagacaggtcattctgtcaagaagaagaagaaagcaaagagttga</cdnaseq> |
| Protein Sequence |
<aaseq>MRPSPPPAAPAAEPVPPWLRSLPVAPEFRPTAAEFADPVSYILK IEPAAAPYGICKVVPPLPPPPKKATFSNLSRSFAALHPDDRSPSFPTRHQQVGLCPRR TRPGLKPVWRSSHRYTLPQFESKAGATRKSLLAGLNFPASRQLTPLDHEVLFWRASAD RPIVVEYGSDMSGSGFSPCAAQPQPPPQQQPTARAAAHLGETAWNMRGVARSPGSLLR FMPEDVPGVTTPMLYVGMMFSWFAWHVEDHDLHSLNYMHLGAAKTWYGVPRDAALAFE DVVREHGYGGEVNPLETFATLGQKTTVMSPEVLVESGIPCCRLVQNAGEFVVTFPGSY HCGFSHGFNCGEASNIATPEWLRIAKEAAIRRASINRPPMVSHYQLLYDLALSMRFRE PSNGEMETRSSRIKEKKKCEGEQLVKKMFIQNVIEDNELLSHLLNDGSSCIILPANAH DGPGLSTLRSTDQSNMNSRISHNLCSREEAPEASGCLSPNRNGDTRNCISSDTHNMEG DKGDIMSATGLLDQGLLSCVTCGILSFSCVAVLKPRDSTARYLMSADSNSINNQLSIS GGSILADAPTNERNGVISRPYSEHCCNEIMADDAEIDKNSALDLLAFAHGGQPDPEED PLEKILKIAHGINKSQPNSSNNVGCVGTKLSSSSTERQERPSSQNAHCNGSSVISNGP KGVRTRNKYQLKMVLSEGFQAKDIYSAKEKKVQSEPSSSKGDVKETIDVSGTENDVGC KSTTISVSEHRGSTKNMYSVKEKKVQSKPSSLKGTVKETVDVSGTENDARCKSITISV SEHRGSTPMTNSLAASIVKPDKDSSRMHVFCLEHAIEVEKQLHAIGGSNIMLICRPEY PKIEAEARLLGEEMGLVYDWKGIHFKEANMEDRQKIQEVLRDEEAIPTSSDWAVKLGI NLYYSANLAKSPLYNKQMPYNRVIYRAFGCDSPNDSPVMFNTCERKQSHQKKIVVAGR WCGKVWMSKQVHPYLAHRVESQEAEEADRICSYHFDEKHKAEPVGNSSRVEASKRKSS SLTDVTESSNRRGEIPGEETNTKRPKHSQENNLRALETAAEVVVPSPAGTGLRVSSRI ANRANKLKSKMEKEDVPSSRPKSNIKEKSSHASGQKSNVQEANANSASHLRAMPPKQK AEAEAKKQIRTPKPPKQAVEYSCDIEGCSMSFRTKRDLSLHKSDICPVKGCGKKFFSH KYLLQHRKVHTDDRPLTCPWKGCNMAFKWPWARTEHLRVHTGDRPYVCHEPGCAQTFR FVSDFSRHKRKTGHSVKKKKKAKS</aaseq> |
| Gene Sequence |
<dnaseqindica>122..995#1093..1171#1522..1589#2179..2329#3143..3723#4192..5001#5307..6604#attcccatttcctctcgctcccaccaagaccaaccaaacccctgtttctccctcaaaacctccctctctttcccccccgaatgctcgagcgctgcgcggcggaatcccctactcccctccgatgaggccctcgccgcctcccgccgccccggcggcggaaccggtgcccccgtggctgagatcgctgcccgtcgcgcccgagttccgccccaccgccgccgagttcgccgatcccgtctcctacatcctcaagatcgagcccgccgcggcgccgtacggcatctgcaaggtcgtgccgccgttgcccccgccgccgaagaaggccaccttctccaacctctcccgctccttcgccgcgctccacccggacgaccgctcgccgtccttccccacccgccaccagcaggtcggcctctgcccgcgccgcacgcgcccggggctcaagcccgtgtggcggtcctcccaccgctacacgctcccgcagttcgagtccaaggccggcgccacccgcaagtcgctcctcgccggcctcaacttccctgcctccaggcaactcaccccgctcgaccacgaggtgctcttctggcgcgcatcggccgaccgccccatcgtggtcgagtatggcagcgacatgtcgggctcgggattctccccttgcgccgcgcagccgcagccgccgccgcagcagcaaccgacggcgcgggcggcggcgcaccttggggagacggcgtggaacatgcgcggcgtggctaggagccccggatcgctgctgcggttcatgccggaggatgtccccggggtcaccacgccgatgctctacgtcgggatgatgttcagttggttcgcgtggcacgtcgaggaccacgacctgcacagcctcaactacatgcacctcggggccgccaagacgtggtacggcgtgccgcgcgacgccgcgctcgcgttcgaggacgtggtgcgcgaacatggctacggcggggaggtgaaccccctaggtgaggcgcttgaaactatcaattttcattaggaacacgctatgctctgttttcccaattctgaattggttttcctgaactgcgagttggtatgcagaaaccttcgctacattggggcagaaaacaacagtgatgtcccctgaagtgcttgtggagtcgggtatcccctgctgcaggtgttatttccttctgtttgttcagtaactagccaaatttcccgtgcaattttgcatggaactagcttaaagtttatttgatgtagaattgcttttggtatacgtcttctgcttctatttctataaatacaatctataccattataagttgaacccgacatgatcaaagcatacatatatctcttttctcagattattaatgttgtgatttctaggccctcagtgaatttggtggactcttttagccttctctttattaataatatattccataatagatagatatattttctatggtatgtgccatgtctaccagtggtttgattaattgattctctgtgtttgaacagattggtgcagaatgcaggggaatttgtggtcacttttccaggatcttatcactgcggtttcagtcatggtgagactgagcaatcacaatagctagcctcattttcctatgctacattttgtacacaattattcctgttctaatcatgcctatgacattttttttcatccctaactgcatgaaatatatgtcttacacagggtgcaatacccatagaatgccaaccttttattgagacatgcctataccaggaaaacttataactcttttttttttaaaaaaaaacatgtgtataccatgtgcagtgcaaaacaaataggtattctatctactgagttaatcagatgtgattgcaggatattgtgtaaaagatttgaagtgtttactaaaaatagtgaattaacctatatttgtgctaaacgtctgccctaccctagtacgttacaactattatgatgttaccatttcctgaattcgattgttcatcttgacacgggcactcttcatttcattccagcaacacaggtgtactgtgtgcaatatgcaattgcaaaatgtgtctctgttgtaaccactgcaatgcacttgatcactgcctctttcatataattaatctaatcaacctcatgactcatgagggcatcatctatttgggcaggattcaactgtggggaagcatcaaatatagctactcctgaatggttgagaatagcaaaagaggcagcaatccgaagagcttcaatcaatcgtcctcccatggtttcgcactatcaattactttacgatctcgcactgtctatgcgttttaggtatgtcataatttgcatgtttcatgatgtgcacttgttcttgatttcttgtgagagattctatcaacttctgccccccataaaatacttatctcacagcccagtttggcactttggctatggcgcatttcttctccctgtattaacttagagtacattagagtagattttggaaaaccctgtttcatgacgtgcacttattcttgatttcttgcgagagattttgtcaacttctgcctcccagaaaaatacttatctgacaacccattttggcactttggctatggcacgtttcttaatcactggataacttagattatgttagagtagattttagaaaaccccatgtttttgtgaaaccttagaccataatacctaggggttatatgacgtaagccataatacctaggtttttttttccaactttgatggcatgacctttttttccttaaaataaatcattatgctatcaataaaaatggtcagccagttagtgcagaatcaataatttccatgtattgacctgtgcacgactctgctcagtgatgcaagtatccccattcccacgtatgcaacatcaataaagtcttaaaatattccaccgtagtgtcttacggtagccaaggtttttatggtgatgcttcaatctgttagcggttagcgatgtatatgtgttatgagagctgctttctgacagaactcttttgatacttgctgatgctatatgaaaataagacaatcttttttatgcatttgcccccttcatttttttatggcaatcctttatcttgttttgaacttctacttcttcagggaaccatccaatggtgaaatggagacacggagctctcgaataaaggagaagaagaaatgcgaaggggaacaactggtcaagaagatgttcatccaaaatgttattgaagataatgaactgcttagtcatcttctaaatgacggatcatcttgtattattcttccagcaaatgcccatgatggtcctggtctttctactttgcgctcaacagatcaatcaaatatgaattccagaatatcacataacctatgcagtagggaagaagctccagaagcctcaggatgcttatcgccgaacaggaatggtgataccagaaattgtatttcatcagatacgcataacatggaaggtgataagggagatataatgagcgctactggattgttagatcagggtctattatcatgtgtcacttgtggaattttaagtttttcatgtgtggctgtactcaaaccaagagattctacagcacgatacttgatgtctgctgattctaattcaattaataaccagctttctatttctggagggagtattctggcagatgcgccaacaaatgaaaggaatggtgtcatttctcgtaagttttcatcttacaatctgtactgaagacattttatttcttacgctcttgttttcagcttatcttatgtacttccacattaaaagggtagtgagttactgatattttttttccttctaaggtagtaaaagaattgctattaggtgccatagattattgatctatcataactaaggaaaatttaccctgtacgaattggatgttttgaaacaaataaacctcctttataactccatatctaatgaaatgatctattggagtttcttatgtgtttttactatgggaatgaatggactgtggttctatatttgtttatctgcatttgtggtaggtataatcaggtgcttgtagggacatttaattttcagttaatttggtgagccgaatgctatttactattttgtccatgtgctttaacaatcattttcatctgatacagtatatgcatttgtaatcaacacacaggtccatattctgaacactgttgcaacgaaataatggccgatgatgcagaaatcgataagaattctgctcttgatctcttggcatttgctcatgggggtcaaccagatcctgaagaagatccactggagaaaatactgaagattgcacatggcattaacaaatcacaacctaatagttcaaataatgttggttgtgttggaacaaagctgtcctcaagtagcacagagcgccaagaaagaccatcttcccagaacgctcattgtaatggtagctcagttatttcaaatggaccgaaaggtgttcgcacgagaaataagtatcaacttaagatggtactttctgaaggttttcaggcaaaggatatctattctgcgaaggaaaagaaggttcaatcagaaccatcaagctcaaaaggggatgttaaggagacaattgatgttagtggcacagagaacgatgtcggatgtaaaagcactacaatctctgtcagtgaacacaggggttctacaaagaatatgtattcagtgaaggaaaagaaggttcaatcgaaaccatcaagcttaaaggggactgttaaagagacagttgatgtcagtggcacagagaacgatgctagatgtaaaagcattacaatctctgtcagtgaacacaggggttctacacctatgaccaatagtttagctgcatcaatcgtgaaacctgacaaggattcatcaagaatgcatgtattttgtcttgagcatgctattgaggttgagaagcaactgcatgctataggtggttctaatattatgcttatatgtcgtccaggttagtcatcaagctgtttgctcactgttatgaagtgcaattcattttcaaccatttttaagcatttttctgcatgccttttattgttttcattggtaattggttcatagtatgacttagcactttagcagtgacaccatatctgtacacatgccatcttacatgatgttcctattagctttgctgaaatcagaataagtaggttgaaccttttggtgcttctgatgttcataatactaaattttcaagactgctgcatatgttcttaaaacattaattaactttttttgttatgatttgtacagaatatcccaaaatagaagcggaagcaagattgttgggtgaagaaatgggactggtatatgactggaagggcattcatttcaaggaggccaacatggaggacaggcagaagatacaggaagttctgcgggatgaggaagcaatacctacaagcagtgattgggctgtaaaattgggtattaacctttattatagtgcaaatctggccaaatctcctttatataacaaacaaatgccatacaacagagtcatttatagggcatttggctgtgattctcctaatgactcgccagtaatgttcaatacttgcgaaaggaaacaaagccaccagaagaaaatagtggttgctggccggtggtgtgggaaagtatggatgtcaaaacaggtccatccatacttggctcacagagttgaaagccaggaagcggaagaagcagatagaatctgttcttatcattttgatgagaagcacaaagctgagccagttgggaattctagtagagtggaagcctccaaaagaaagagtagcagtttgacagacgtaacagaatcaagcaatagaaggggggaaatacctggtgaggaaacaaacaccaagaggcccaaacattctcaagagaacaatctcagagctttggaaaccgctgctgaagttgtggtgccctcaccagctggaacaggtctccgcgttagctccaggattgccaacagggcaaacaagctaaaatcaaagatggaaaaggaggatgtcccttctagccgtccaaagtctaacataaaggagaaaagcagtcatgctagcggtcagaaatcaaatgttcaagaggcgaatgctaattctgctagccatttgagagcaatgccaccaaaacagaaggctgaagcagaagcaaagaagcaaataagaactccaaaacctccaaagcaagcagtggagtactcgtgcgatattgagggttgttctatgagttttcgtacaaagcgggacttgtctctgcacaagagtgatatctgcccagtgaaaggctgcgggaagaagttcttctcgcacaagtatctgctgcagcatcgcaaggttcacacagatgaccgtccgctaacatgcccatggaagggctgcaacatggcattcaagtggccatgggcaaggactgaacatctcagggttcatacaggcgacaggccctatgtttgccatgagccaggttgcgcacagacattcaggtttgtctcagatttcagccgtcacaagcgcaagacaggtcattctgtcaagaagaagaagaaagcaaagagttgagctcgtattacagcaagctagttatggtagaaccggacgcagtaggaggtagtttgtacattctacttcactagtttagcactgatctctctatctgacggattctgttggcaccacaatcggtgtgctttgtgttagtttatattagttttcatgattact</dnaseqindica> |
| External Link(s) |
