Os01g0125800

From RiceWiki
Revision as of 04:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0125800| Description = Nitrous oxide reductase, N-terminal domain containing protein| Version = NM_001048428.1 GI:115434269 GeneID:4326007| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0125800

Description

Nitrous oxide reductase, N-terminal domain containing protein

Version

NM_001048428.1 GI:115434269 GeneID:4326007

Length

5144 bp

Definition

Oryza sativa Japonica Group Os01g0125800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1412839..1417982

Sequence Coding Region

1412918..1413309,1413845..1414006,1414534..1414720,1415221..1415646,1416361..1416768
,1417397..1417654

Expression

GEO Profiles:Os01g0125800

Genome Context

<gbrowseImage1> name=NC_008394:1412839..1417982 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1412839..1417982 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcagctgcaggagacgtacgcgtgctcgccggcgacggagcgcggccgcgggatcctcctcgcgggggaccccaagacggagacgatcgcctactgcacgggccgcagcgtcatcatccgccgcctcgacgcgccgctcgactgctgggcctacccggaccacgcctacccgaccaccgtcgcccgcttctcccccaacggcgagtgggtcgcctccgccgacgcctccggctgcgtccgcgtctgggggcgctacggcgaccgcgccctcaaggccgagttccgccccctctccggccgcgtcgacgacctccgctggtcccccgatggcctccgcatcgtcgtgtccggggacggcaaggggaagtccttcgtccgcgctttcgtgtgggactctggcagcactgttggtgagtttgacgggcactcaaagagagttctgagctgtgactttaagccaacccggccgttccgcattgtgacatgtggtgaagattttctggcaaactactatgaaggaccaccatttaaattcaagcattccataagggatcactcaaactttgttaactgtatccgatatgctcctgatgggagtaagtttatcagcgtgagttcagataagaagggtttgatatatgatggcaaaactggagacaagattggagaactttccagcgaaggcagtcacacagggagtatatatgctgttagctggagtcctgacagcaaacaagttctgacagtttctgctgataaaactgccaaagtctgggacatactagaagacgctagtgggaaattgaacagaactttggcttgtcctggtacaggtggagtagatgacatgcttgtgggttgcctctggcagaatgattatcttgtgacagtctctcttggtgggacatttaatgtgttctctgcaagtaatccagacaaagagccagtaacctttgcaggacatttgaagactgttagttctttggcctttttcccacaaagtaaccccaaaactatactgtccacaagttacgatggcgttatcatgagatggataaagggtgttggatatggtggcagattgatgcgaaagaacaacacccagattaaatgctttactgtagcagaagaggaactcgtcacctctggatatgataacaaggttttcagaattcctcttaatggagatcagtgtggagatgctgaatcagttgatgtaggaggtcagccaaatgctttgaaccttgcaattcaaaaacctgaatttgcactggtcacaacagattctgggatagtattgctgcacaagtcaacggtcatttctacaaccaaagttaattatactatcacttcatctgctgtttctcctgatggcactgaagccatcgttggtgcacaagatgggaaactgcgtatctattccatcaatggggatacagttacagaagaagcattaattgagaagcaccggggtgctattacttgcatacattattcgcccgatgtttccatgtttgcttctgctgatgccaacagggaagccgttgtgtgggatcgggcaacgagagagatcaagctgaagaacatgttgttccactcagctcggataaactgcctggcttggtcacctgacaatcgcctggttgccacaggctcattggacacctgtgcaattgtatatgaaatagacaagccagcatccagccgcatcaccgtaaaaggagctcatcttggtggagtccatggtttaacctttgtcgataatgatagtctggtgactgctggggaggatgcatgcatccgagtttggaagctggtgccacaatag</cdnaseq>

Protein Sequence

<aaseq>MAQLQETYACSPATERGRGILLAGDPKTETIAYCTGRSVIIRRL DAPLDCWAYPDHAYPTTVARFSPNGEWVASADASGCVRVWGRYGDRALKAEFRPLSGR VDDLRWSPDGLRIVVSGDGKGKSFVRAFVWDSGSTVGEFDGHSKRVLSCDFKPTRPFR IVTCGEDFLANYYEGPPFKFKHSIRDHSNFVNCIRYAPDGSKFISVSSDKKGLIYDGK TGDKIGELSSEGSHTGSIYAVSWSPDSKQVLTVSADKTAKVWDILEDASGKLNRTLAC PGTGGVDDMLVGCLWQNDYLVTVSLGGTFNVFSASNPDKEPVTFAGHLKTVSSLAFFP QSNPKTILSTSYDGVIMRWIKGVGYGGRLMRKNNTQIKCFTVAEEELVTSGYDNKVFR IPLNGDQCGDAESVDVGGQPNALNLAIQKPEFALVTTDSGIVLLHKSTVISTTKVNYT ITSSAVSPDGTEAIVGAQDGKLRIYSINGDTVTEEALIEKHRGAITCIHYSPDVSMFA SADANREAVVWDRATREIKLKNMLFHSARINCLAWSPDNRLVATGSLDTCAIVYEIDK PASSRITVKGAHLGGVHGLTFVDNDSLVTAGEDACIRVWKLVPQ</aaseq>

Gene Sequence

<dnaseqindica>80..471#1007..1168#1696..1882#2383..2808#3523..3930#4559..4816#gttattaaccaccacctcctccaccactcgcgaccccaccccagatcaagcggaggaggaggaagaggagagggcaaaaatggcgcagctgcaggagacgtacgcgtgctcgccggcgacggagcgcggccgcgggatcctcctcgcgggggaccccaagacggagacgatcgcctactgcacgggccgcagcgtcatcatccgccgcctcgacgcgccgctcgactgctgggcctacccggaccacgcctacccgaccaccgtcgcccgcttctcccccaacggcgagtgggtcgcctccgccgacgcctccggctgcgtccgcgtctgggggcgctacggcgaccgcgccctcaaggccgagttccgccccctctccggccgcgtcgacgacctccgctggtcccccgatggcctccgcatcgtcgtgtccggggacggcaaggggaagtccttcgtccgcgctttcgtgtaagcacaacaacgcgcccccctcgatctcttctctttacatctcgatctcacgggaaaggatttgggggttcgggggatgcgaagggttgccaccttttctatattctggatcgtctgtcgttaggagatggagggcgtagaaattgttatcgcgatcttgcaatagaaagtgattcgaagatttgtagcctaaggtaatttttggggtgcttcgcaatggccaatggggattataggataggcctcctgacctcctcacggctcaccccttctatttgggtggtggatgtagattattaggaccacttgccattggcgttggattataagtttacaagtgaaatgttcattatttatcaagttgtaattgatgatcataatgatttttgttggcaccagatggatataccggccctgcaatcatgtaatcagtggggttcatttagaagtttattccatcatttattttttacattacatgtgttctcaattctggtatataaactcatgttcagccctttgaatcttgtaggtgggactctggcagcactgttggtgagtttgacgggcactcaaagagagttctgagctgtgactttaagccaacccggccgttccgcattgtgacatgtggtgaagattttctggcaaactactatgaaggaccaccatttaaattcaagcattccataaggttgcaaataatcaaataatactgccagtcttagtctgtcattttcatgcctacttaaaacttgtagtacactgcttctaaggttgtttgtttcctaatatttgttgggatgttcatggcataaggaccagatcacttgatatttcttctggtactacatgcattacatgtgcatacacgaaacttccattttccttggtatatattttgttttaacaaagatgacatctgcataaaaaaaatattagtgtaacctattgcccttacaaatttactttgtttgttccaatcttatctttatcaaacttgtgttatctaaattctgaaggataatgtttagcacttaaagaaaagcttaagtggcttgtttcagtgtaccactaagatatgttgcagatctacatatttcatgataccccttttagttttcatttgttgtcatttatgttctatatggtaagtttgtttcttctttctggcccttctttacatatattttatgtttacccgattccttcaaatttcagggatcactcaaactttgttaactgtatccgatatgctcctgatgggagtaagtttatcagcgtgagttcagataagaagggtttgatatatgatggcaaaactggagacaagattggagaactttccagcgaaggcagtcacacagggagtatatatgctgttagctggagtcctgacagcaaacaagtaatttcacattagttattccatattgttaattattgaactatcaattctgaaagtcttgaatttctggtatattgaaattgatcttggtcaaggactctaggtatgaagttccttcagtaggcggcagtaaagaacagaagtgcagattcagaaaatgtacttcatagaatataactttgttaaatgttaattatagataatgtacctatatgattgttggattgtctgcaaagtataagctttctgcctagatctgagaatgatctacctgtcagttgcatgacttatttatctaggatgtgcattttttctaatagaaattggaattcaattttagtctgtgcatactgcatactttagctatcatgacacatcagccttttatggtcttattgatgtatattttctgtttaccttcttgttccaagtaacttcatatgttttgcattctgtaattcatttctaactgtagtttcttcattcgcccatggctctaggttctgacagtttctgctgataaaactgccaaagtctgggacatactagaagacgctagtgggaaattgaacagaactttggcttgtcctggtacaggtggagtagatgacatgcttgtgggttgcctctggcagaatgattatcttgtgacagtctctcttggtgggacatttaatgtgttctctgcaagtaatccagacaaagagccagtaacctttgcaggacatttgaagactgttagttctttggcctttttcccacaaagtaaccccaaaactatactgtccacaagttacgatggcgttatcatgagatggataaagggtgttggatatggtggcagattgatgcgaaagaacaacacccagattaaatgctttactgtagcagaagaggaactcgtcacctctggatatgataacaaggtgagatagacaatgattagtataaatacccagtgttcctcaaaacgtctgttagagtaatagaatatgtattttttttattctttggaacctttttcttcatggtatataaaggttacaatgttgtgatcattgtttgtgaatgcttaaatcataggtttattaaagaaacacttctttgtattttagtacttttttcttaaacttcttaccactatgataggtggctaattgtgtgaccatgtgtgcatagtcaacttgttatgggaaattggcatggttgttattgtcggtcctgtactaatctatacaaatctcaatattgaatattcacagtgtctatccttacaattttaacttaaataatttggaaattgctaggtgggaaatgtgagtagtttgtatgagatctgtataactgtatttctataatgcaccaaaacagtaacagcttaaaaagtctgcagtctccaatttggatcaaacttcaggaacactttcatacagatgcatatacttgccatgatacaatgtgatgtacctcccacagtgcacagaaattgattctcgagtcccaagatgaccaaaatatagtgttattttattaatgccaacatcaacttctgagtttgaaattttaagtgtatttctctattcttgattaaacaatggagtttagtgatgagcaacttattattttctttttgaaagcaggttttcagaattcctcttaatggagatcagtgtggagatgctgaatcagttgatgtaggaggtcagccaaatgctttgaaccttgcaattcaaaaacctgaatttgcactggtcacaacagattctgggatagtattgctgcacaagtcaacggtcatttctacaaccaaagttaattatactatcacttcatctgctgtttctcctgatggcactgaagccatcgttggtgcacaagatgggaaactgcgtatctattccatcaatggggatacagttacagaagaagcattaattgagaagcaccggggtgctattacttgcatacattattcgcccgatgtttccatgtttgcttctgctgatgccaacagggaagccgttgtgtgggatcgggcaacgagagaggtattgccagttccacttcagtcttttctagttgttaagggattatagactgtccttttcttgtttttaggtcatcttttcactatgcactgtagtacattttcttaacctgaaaatcacgacagtagcatttgttttactgtttgttttcctcagttttactttcaatgaaggccatggatctatgacactgtccattggcaatggcatgtacattgactgatattatgaatctcactcttggttactgactatcttgatttgtcaccttattattacatttattctttacttttgtgaaatagaaaatgaaaattatgaaaataacttattgttgccagtcatgtatagtttgttgaaagtcattacagaaaatattttccttaaaagtattactgaaaatatgttggtccatatccaaggagaggtggaagcttgtgttccccttgtatgatttgcaattgcatgtgcacttatattacatttcagccccacattgccctactgctttacaagcaacttgtatagttacctgaaacttggtttctatgtaatttatggatttgttattttgtcttctttttggggaagaaaaggattgtactaacactattgttttcttcaacagatcaagctgaagaacatgttgttccactcagctcggataaactgcctggcttggtcacctgacaatcgcctggttgccacaggctcattggacacctgtgcaattgtatatgaaatagacaagccagcatccagccgcatcaccgtaaaaggagctcatcttggtggagtccatggtttaacctttgtcgataatgatagtctggtgactgctggggaggatgcatgcatccgagtttggaagctggtgccacaatagatgttctccctgatgttgcctgttgggcgtgtcttcgtcacttgattgaaataaacattgtttgcacttgtcccttagggtgtctgcgatttttttcctatgttgcgacgcagttggccttgagttgcattttctttttgttgcatttctggaagaacttgttgattgttgttattttatccctgcgtctgattttgttaggaactgagaattcagggatgctgtctttttttttccttcctccgtttgtaacctgcacatggctgtatctgtttgtaattttgaccgatcagctgcataatgctttcctctgctgccttttacatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0125800, RefSeq:Os01g0125800