Os03g0129300

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Revision as of 12:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0129300| Description = Similar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) (Fragment)| Version = NM_001055382.1 GI:115450492 G...")
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Gene Name

Os03g0129300

Description

Similar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) (Fragment)

Version

NM_001055382.1 GI:115450492 GeneID:4331495

Length

3186 bp

Definition

Oryza sativa Japonica Group Os03g0129300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1640651..1643836

Sequence Coding Region

1640705..1640782,1640864..1640974,1641821..1641982,1642097..1642264,1642347..1642507
,1642594..1642655,1642742..1642791,1642911..1643317,1643424..1643559

Expression

GEO Profiles:Os03g0129300

Genome Context

<gbrowseImage1> name=NC_008396:1640651..1643836 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1640651..1643836 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccacacacgcagcgctcgcggcgtcccgcattccggccaccgcccggctgcacagcaaggcggcgtccaagcagagggtggacttcgccgacttctccggactgaggccgggatcgtgctccatcagccacgccgcgagggaggcgtccttctccgatgtccttggctcgcagctcgtcgccagggctaccggagagaacgccgtgagggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaacttcctccggtgctggcacgaacgcgagaactccccgctcgaggtcgtcgtcgtcaacgacagcggaggcgtcaggaacgcatcacaccttctcaagtacgactcgatgctcggcaccttcaaggccgacgtcaagatcgtcgacgaccagaccatcagcgtcgacggcaagctgatcaaggtcgtctccaacagggaccccctcaagctgccatgggctgagctcggcatcgacattgtcatcgagggtaccggagtgttcgtcgacggccccggcgccgggaagcacatccaggccggcgcgaagaaggtcatcatcactgctccggcgaagggtgctgacatccctacctacgtcctcggtgtcaacgagggagactactcccacgaagtggccaacattatcagcaatgcttcctgcacaaccaactgcctcgctccgttcgtcaagatcttggacgaagagttcggaatcgtaaagggaaccatgaccacaactcactcctacaccggcgaccagaggttgctggacgcgtcgcaccgtgacctgaggagggcccgggcggcggcgctgaacatcgtgccgacgagcaccggcgccgcgaaggccgtggcgctggtgctcccgcagctgaaggggaagctcaacggcatcgcgctgcgcgtgccgaccccgaacgtgtccgtggtggacctggtgatcaacaccgtgaagaccggcatcaccgccgacgacgtgaacgccgcgttccgcaaggccgcggcggggccactcagcggcatcctcgacgtctgcgacgtgccgctggtgtccgtcgacttccgctgctccgacgtctcctccaccatcgacgcctcgctcaccatggtcatgggcgacgacatggtcaaggtggtcgcctggtacgacaacgagtggggctacagccaacgcgtggtcgatctggcgcatctggtggcgagcaagtggcccggcgcggcggtgcagggcagcggcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgcaaagtgtacgaaaactaa</cdnaseq>

Protein Sequence

<aaseq>MATHAALAASRIPATARLHSKAASKQRVDFADFSGLRPGSCSIS HAAREASFSDVLGSQLVARATGENAVRAPAEAKLKVAINGFGRIGRNFLRCWHERENS PLEVVVVNDSGGVRNASHLLKYDSMLGTFKADVKIVDDQTISVDGKLIKVVSNRDPLK LPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVLGVNEGDY SHEVANIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRR ARAAALNIVPTSTGAAKAVALVLPQLKGKLNGIALRVPTPNVSVVDLVINTVKTGITA DDVNAAFRKAAAGPLSGILDVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVVAW YDNEWGYSQRVVDLAHLVASKWPGAAVQGSGDPLEDFCKDNPETDECKVYEN</aaseq>

Gene Sequence

<dnaseqindica>55..132#214..324#1171..1332#1447..1614#1697..1857#1944..2005#2092..2141#2261..2667#2774..2909#atccagccgagcgagctaaggaaggaagaagcatacaggcggcagcgacgagccatggccacacacgcagcgctcgcggcgtcccgcattccggccaccgcccggctgcacagcaaggcggcgtccaagcaggtgcgcgcgtgcgtgatcttgtggtattatccggctttgcgtgtgaagctacgggtgatctgatgaaatgtgcggttgcagagggtggacttcgccgacttctccggactgaggccgggatcgtgctccatcagccacgccgcgagggaggcgtccttctccgatgtccttggctcgcagctcgtcgccagggtacgtgcctgtgcttagcttagctaacaaattgatctgtagctttctgtttttccttttacctgtgcacaattcagtatttcagataacaaactgtagaatttaccacgcacgttagtatgactacagtttaacctgatgagtaacgtaagatggtcccttttggctatggaaaacagtagtaatcgttgtacataaataaatacagagttttcgttacttgttttttttttagcaaaagtatttatactgctattatatgttacaaacttctggaaattcaatagttgggttctttttaaaaaacaaaaaatgtagtataaacgcaaacgctcacagcgtgtgtagataagacaaaataatcaccttattaatagccgtttttgtgaaataacagcgacatgttgcgtgcttcttcactagatggatgaaactttatctttgctggtagatcacacatgatttacatctctagtctcttatgttggacacaaccaatgagtttttatacttactccatcaatctctagtacatgaatctgaatcgaaaatatcttatattttggaatagatgaaatagaaaataagacatgagctatattgggacaaaccacaacttcaaacggtcaaaaattgcataggacattatcctagttactaatattccgtgcgtgtattacagtactaggtagataaatgttccagtatcatgcactcaagactataatgacaagttggtcaagttatcgtttttggatgcctcgccaaccacaatatcatgtattgtacagacgtgtattctgactgtaagcgcaagtcctgaatgaattgttcaacctgtggcaggctaccggagagaacgccgtgagggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaacttcctccggtgctggcacgaacgcgagaactccccgctcgaggtcgtcgtcgtcaacgacagcggaggcgtcaggaacgtaagtacaagtactcatccttcagaaaagcttgtcctgaacgtaatcaagcacagactaatcaatgactgattccgatataattttgttctctgcgtgtgttaattatttcaggcatcacaccttctcaagtacgactcgatgctcggcaccttcaaggccgacgtcaagatcgtcgacgaccagaccatcagcgtcgacggcaagctgatcaaggtcgtctccaacagggaccccctcaagctgccatgggctgagctcggcatcgacattgtcatcgaggtacacaaatcgacaattgactgtgaactcaatctgcagggaacagaactgacaatgctgcattgctgtgtgtgtcatgaagggtaccggagtgttcgtcgacggccccggcgccgggaagcacatccaggccggcgcgaagaaggtcatcatcactgctccggcgaagggtgctgacatccctacctacgtcctcggtgtcaacgagggagactactcccacgaagtggccaacattatcaggtaagcaaaagcaaacaccaccacttcaatatatatgcatatcaaactctgcaacatgcataagaactctgtttcttgtgttgcagcaatgcttcctgcacaaccaactgcctcgctccgttcgtcaagatcttggacgaagagttcggtaagaactttaatcgctcgccttaacctgaagcacaatacgtatggcaacatgtgtttcctgactgtgttgtgacgcatgtgcaggaatcgtaaagggaaccatgaccacaactcactcctacaccggcgaccaggtcggtcggttttctgatcaaaacgagtaaattgattgatcgatgatcgctgcagcatttcgtacgtgcagaggctgatacattctgcgtgtgctgtgtttgatgattgactaacacagaggttgctggacgcgtcgcaccgtgacctgaggagggcccgggcggcggcgctgaacatcgtgccgacgagcaccggcgccgcgaaggccgtggcgctggtgctcccgcagctgaaggggaagctcaacggcatcgcgctgcgcgtgccgaccccgaacgtgtccgtggtggacctggtgatcaacaccgtgaagaccggcatcaccgccgacgacgtgaacgccgcgttccgcaaggccgcggcggggccactcagcggcatcctcgacgtctgcgacgtgccgctggtgtccgtcgacttccgctgctccgacgtctcctccaccatcgacgcctcgctcaccatggtcatgggcgacgacatggtcaaggtggtcgcctggtacgacaacgagtggggctacaggtgagagcaatcagcaatgcaaacaaacaacacatgttactgcgtgcgttgcaattgcattgctcggcgtctgatcgatcgtgtattcgtgtgcggttttgtgcagccaacgcgtggtcgatctggcgcatctggtggcgagcaagtggcccggcgcggcggtgcagggcagcggcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgcaaagtgtacgaaaactaagaccactgtccaagtacgggctcgcgtaggtgcagaaatatatactcctataatgtaacgaagcacacacattgactgtccccgggcagaactgctatactatatatactgtgctcggattggctgcccgtacgttgttccccttcgacagaggaacgcatgactgtcgaagaagaaacacagctgcagacacgggccattttctgtgaggtgtaatactgaactttggtacagacttcaggatttttttcttttcgagtcttgttttactttcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0129300, RefSeq:Os03g0129300