Os06g0613400

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Revision as of 09:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0613400| Description = Conserved hypothetical protein| Version = NM_001064605.1 GI:115468941 GeneID:4341524| Length = 2715 bp| Definition ...")
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Gene Name

Os06g0613400

Description

Conserved hypothetical protein

Version

NM_001064605.1 GI:115468941 GeneID:4341524

Length

2715 bp

Definition

Oryza sativa Japonica Group Os06g0613400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25393545..25396259

Sequence Coding Region

25393957..25394929,25395240..25395988

Expression

GEO Profiles:Os06g0613400

Genome Context

<gbrowseImage1> name=NC_008399:25393545..25396259 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25393545..25396259 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatgcgaatgtgttgggcggcgatgtggtggcggacgatttcaactacttctccggtgtgagcaccatctttgtggccaacatccaggaggtgaaggaccgggtttcccagatcgagctcctcttctgcagccagctcttccctcatgtccaggccatgtggaaggcggccaaggatgcgtggatggagagggaggccgccctattgagccaattggaggagctgagcagcgggaagcggcacgcggaggagaaggcgctgcagctggggtgctcccttgatgagatgaaggggaagcttgcggatgccgagcgatcggtcgcggggcatgaggttgagaagaagcggcttctggggagattggaggaggaaattgggaacaaagatgaggttattcgccggctagagagggagattgcggagaaggctgctgatttttccagggagagagatgcccatcagaggcttttgcagctggttgagttgaaggacaagaatttgcttctcgagcagaataaacggagggatgcggaggagatggcactgcagctggggaactctcttgaggatatgaaggggaactttgagcgattgatcgcgaggcatgaggttgagaaggagcgaattccggggaggttggaggaggaaatggggaaaaaggatgaggttattgggcggctagagagcgagattgcggagaaggctgctgatgtctctagggaaagagatgcccatcagaggatgctgcagcaggttgagttgaaggataaggatctgcttctcgagcagaataagcggaaggacctgatcgaggattacactaagctgaagacactctacaaggatttgaagtctcagtacaactttcttgttggaaagattggccagaatgaaggctccaagtctcctgtagtcaatgtggtggatcggaaaacctccggaagccctccaagcaagagaaagctcaaagatctggtggacactaaaaaggagaacaatcaggcagtatctaagactgtagatgagaaaaatggtcctgcttcaagtgcaaaggcacaaggtacccaccatgctagctcagtcaggagttcattcagtaactcgcgcctttgtctaccgtctcgtacaaccaatcctccaccaaagaatgctactagcaattcaaaaacagaggcagcatctagtttcacccgcccaagtctacactggagggagactcgcgcgcgtaaagaaccaggcgttgtagatccacatgatgatttccttgacacacctctggaggctgtcaaaaatatgatcaggaatcctaaaacgccagaagaagcacaagcccttgctgcctctcctcctaaagatatggacttcaataactctgatgatgagactcaagatgtcaatattgccacccagggccagaaaaacatgccagttcccaagcagcaaagtacaatttcaatccaaccaccaaataaaggtttcaaatacacagaacctgtaagaaaaaaggctgaccgggagaatctgaaaggcgttgagtgcaagcagtgcaagaaattctatgatgctgttcttccagatggccgcacaaatggtgacggtgtggactctacaagcatgaggtgtgagcatcatgatggcgtatccagacatcgctacaggtacgcgccgccgctgacacctgaagggttttggaacattgggtttgaatcagaaatgtag</cdnaseq>

Protein Sequence

<aaseq>MNANVLGGDVVADDFNYFSGVSTIFVANIQEVKDRVSQIELLFC SQLFPHVQAMWKAAKDAWMEREAALLSQLEELSSGKRHAEEKALQLGCSLDEMKGKLA DAERSVAGHEVEKKRLLGRLEEEIGNKDEVIRRLEREIAEKAADFSRERDAHQRLLQL VELKDKNLLLEQNKRRDAEEMALQLGNSLEDMKGNFERLIARHEVEKERIPGRLEEEM GKKDEVIGRLESEIAEKAADVSRERDAHQRMLQQVELKDKDLLLEQNKRKDLIEDYTK LKTLYKDLKSQYNFLVGKIGQNEGSKSPVVNVVDRKTSGSPPSKRKLKDLVDTKKENN QAVSKTVDEKNGPASSAKAQGTHHASSVRSSFSNSRLCLPSRTTNPPPKNATSNSKTE AASSFTRPSLHWRETRARKEPGVVDPHDDFLDTPLEAVKNMIRNPKTPEEAQALAASP PKDMDFNNSDDETQDVNIATQGQKNMPVPKQQSTISIQPPNKGFKYTEPVRKKADREN LKGVECKQCKKFYDAVLPDGRTNGDGVDSTSMRCEHHDGVSRHRYRYAPPLTPEGFWN IGFESEM</aaseq>

Gene Sequence

<dnaseqindica>413..1385#1696..2444#gaaaagctttctcccccatttcaagcggcgcgaacggcggcggcggccggcgaggagggcgacggctagggtttttctctctctccgccgccgaaatcgaatccccgaggtgagctccatctcatacccaccgagtctcaccgtcccgacccatctccttcacccgccgccgccgcctgcgctgccccgccgatcaccgtgagctgctgcagcttccgcctccggtgagcacccgttgccgacggacatcgtcttccttcctcatccatctcgttctacccgctccattcctcgaattcgcattagccttcatcttctcttctggatctggaagcttttctgttcgtcttaaccctagtactaattacagttttttttacccaaaattttttttggtgccctggctgtagagatgaatgcgaatgtgttgggcggcgatgtggtggcggacgatttcaactacttctccggtgtgagcaccatctttgtggccaacatccaggaggtgaaggaccgggtttcccagatcgagctcctcttctgcagccagctcttccctcatgtccaggccatgtggaaggcggccaaggatgcgtggatggagagggaggccgccctattgagccaattggaggagctgagcagcgggaagcggcacgcggaggagaaggcgctgcagctggggtgctcccttgatgagatgaaggggaagcttgcggatgccgagcgatcggtcgcggggcatgaggttgagaagaagcggcttctggggagattggaggaggaaattgggaacaaagatgaggttattcgccggctagagagggagattgcggagaaggctgctgatttttccagggagagagatgcccatcagaggcttttgcagctggttgagttgaaggacaagaatttgcttctcgagcagaataaacggagggatgcggaggagatggcactgcagctggggaactctcttgaggatatgaaggggaactttgagcgattgatcgcgaggcatgaggttgagaaggagcgaattccggggaggttggaggaggaaatggggaaaaaggatgaggttattgggcggctagagagcgagattgcggagaaggctgctgatgtctctagggaaagagatgcccatcagaggatgctgcagcaggttgagttgaaggataaggatctgcttctcgagcagaataagcggaaggacctgatcgaggattacactaagctgaagacactctacaaggatttgaagtctcagtacaactttcttgttggaaagattggccagaatgaaggctccaagtctcctgtagtcaatgtggtggatcggaaaacctccggaagccctccaagcaagagaaagctcaaaggtactcctgccctttgatttcctttcattcagtagagctatttaaaccttgttaatcaatcaccatttttattctctaattactgttacctggaagtttcatttgaagaataccaagttttaattgcaattgtgtactataatccatggtgctctgatcaatgccgcggttgaaagtattattaagcacctttgtaatctgcaagtaatgtcctgccaatgctatcatattagcactaagatctatgcctcctaaatcgatactgattgatgtctgccttagcattttcttttacttgcttgattttcagatctggtggacactaaaaaggagaacaatcaggcagtatctaagactgtagatgagaaaaatggtcctgcttcaagtgcaaaggcacaaggtacccaccatgctagctcagtcaggagttcattcagtaactcgcgcctttgtctaccgtctcgtacaaccaatcctccaccaaagaatgctactagcaattcaaaaacagaggcagcatctagtttcacccgcccaagtctacactggagggagactcgcgcgcgtaaagaaccaggcgttgtagatccacatgatgatttccttgacacacctctggaggctgtcaaaaatatgatcaggaatcctaaaacgccagaagaagcacaagcccttgctgcctctcctcctaaagatatggacttcaataactctgatgatgagactcaagatgtcaatattgccacccagggccagaaaaacatgccagttcccaagcagcaaagtacaatttcaatccaaccaccaaataaaggtttcaaatacacagaacctgtaagaaaaaaggctgaccgggagaatctgaaaggcgttgagtgcaagcagtgcaagaaattctatgatgctgttcttccagatggccgcacaaatggtgacggtgtggactctacaagcatgaggtgtgagcatcatgatggcgtatccagacatcgctacaggtacgcgccgccgctgacacctgaagggttttggaacattgggtttgaatcagaaatgtagcacatgaagtatgatgcgctcttcattgattagtgcagtgtcgtgccctaacataggttctcagtcaccccccagatactgttaataatgtcagtagtaaatctcatgctggggaaatgatcatttctttttttaagattatatgtttggatagaatgccaatttgttgaagatagaatgtacttactgtcacatcgattctatgtaaatgacatctgacattgaaaagcagtcgaataatcttgaataacaagcgttataacgttacttg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0613400, RefSeq:Os06g0613400