Os07g0616000

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Revision as of 08:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0616000| Description = Conserved hypothetical protein| Version = NM_001066808.1 GI:115473348 GeneID:4343904| Length = 7835 bp| Definition ...")
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Gene Name

Os07g0616000

Description

Conserved hypothetical protein

Version

NM_001066808.1 GI:115473348 GeneID:4343904

Length

7835 bp

Definition

Oryza sativa Japonica Group Os07g0616000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26041855..26049689

Sequence Coding Region

26042185..26042243,26042326..26042505,26042609..26042711,26042832..26042856,26043324..26043351
,26044340..26044492,26045076..26047158,26047403..26048720,26048993..26049076
,26049218..26049282

Expression

GEO Profiles:Os07g0616000

Genome Context

<gbrowseImage1> name=NC_008400:26041855..26049689 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26041855..26049689 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcccgacgccccgctcgacttcgcgctcttccagctctccccgcgccgctcgcggtgcgagctggtggtgtccgggaatgggcggacggagaggatcgcgtccgggtcggtgaagccgttcgtggcgcacctgcgcgcggcggaggagcaggcggcggcgcagccgccgccgccggccatccggctgcagctggaccgccgcgccgcgtggttcagcaagggcaccctcgagaggttcgtgcggttcgtgagcacgccggaggtgctggagatggctaacaccttcgacgcggagatgtcgcagctggaaggggctaggaagatttatgcacagggagttgccggaggcgctgatggagctgaatcagcagcagctgcagatattacgaagaaggaacttcttagagcgattgatgttcgtctaagtgctcttaaacaagaccttgtcacggcttgtgcccgggcatcatctgcagggttcaaccctgacagtgtttctgagcttgttctttttgcagatcattttggtgccaaccggctgagtgaagcatgcaacaaattcatgtcactttgccagcggcgtccagacatctgtcctcattactcggtgtcatcaacttcgtcacaatggaagagctttgatgatggaaatgtccgtggctcctccagttcagacatgtcactagacgagacacaagctgatcaaggtgcatccagcaacaaatctataattggtggtagtgtctctcatattcacagaagcaacagccaaaactcagtagatgttccaccagaacccagcgcagttcaacaccctaaaccaactatacagcagtcagtagagaaacaagaaaaggaaacagatgctcttcctgcccctgccccagctggagggggttcaagacggttgagtgtgcaagacaggataaacatgtttgagagtaagcagaaggaacaaacctcaagttctggtaatagtgctgcatgtactagtaaggtggttccaacgaaaggtgagcaccgcagggtgccttctggtgcgtccatggacaagttggtaaggaggtggagcaatgtaagtgatatgagcattgatctaagcaacaacgatagcagcagcttaaatgaaaagagggaaattggaacccctgttggaaccccaacatctgccaatttggaggttaattctaaggcaagagctgacggggacgctaatgggctgaagcatgcagttacatcatgccaaaaagatacatctgatgccttacccttggattctaccactgcagatgctttctcatcctcaactttgaatactacctcaccatcccccttatcagccatcgcttcttcttctcctcagaaacagaccgcacctcgtgtggaagatgacatggttataacctctagcattgagagtgagtcatccttcagaaaggaggtaggggctagtcaaggaaaaggtgacgtgaggatgtcagggcaagctgtttcaagtgtttccactcgagcccgagtaaaaacatctccaaggccaacatggccagaaaacaatgtaactttaagtagcccaccattgtcacaggagcatgtacagatgaccgatgaggaaactattcccattgttcatgaagtagcagttaaaaaggaacagattgtacagaaagataatagaggttctcgtctccgttctaaagagattcatgctgaagcagatgtggttggaaggaaggaccgaccctctcgaacaactggaaagatatctgataccagaacaagggccacctccaacccacgtgctaattttaggggttcatctgtcagggatgaagctgcctctacagaagctgaagttcatgatgttaacttgcaacggaaaagtctagcgcggaaggtagaggattctgggagaaaggttgcagctggctctgaaatactgcctcaatcagattgttctattcatcagggaactaatttgagcagacaatcatccagtgctgaacaggaattgagtttgcatggaggtaaagtcaaattaattagtgatggaaatgctgttcctttggagcagactaagagaccgacaaaaggtagtcaagatcggcatgatgaactgcaaaagaaagccaatgaattggagaagctatttgctgcacagaagctaacctcttctaggagaggcaagtcaactgatgtgcaggttgagaacacacccagggtgaatgaggtaaagcctccactggttcttccagagaggatttatacaaagcaaattgtaaaggagagtataaccaatgagttcgatgccaatgagcttttaaagatggtggatactgaagggtataacaataacgtaccacaaagcattattagcttagaagagtcaaggggaaagttctatgatcaatatatgcagaagagggatgcaaaactaaaggaagattggaagctgcaaggagaacagaaggaagcaacaataaaggcaatgcgtgatagcctagaacgaagcaatgctgagatgcgggccaaattctctcggtcttcaagtgttcctgattcaacatatatttctcgttgcgctcataagtttcctcctttgcaatcagttataaaggataaggatcaggggatagattccttcttggtagaagaagaaatgaatagtgactatctatctggtgatggttcatccaggagtgctgattccaggaagcatttttcaaataaagttgcctgcaatcaaaagaagtctattgctcctgttcataggcattcatcaaggaccgtaagctctggttatgcaaaccgtaggaatctaccagataatcctcttgcacagtctgtccccaatttcgcggacttaagaaaagaaaatacaaagccctcagctggtctgagcagagctgctccaaggacccagccaaaaagttttatccgtagtaagagcatcattgaagagagtaagaatatatcaaaagatcaatcgaggaaatcacagtccatgaggaagaacttaagtcctggtgaattaagggacgctacatccatgaatgacgtcatatacaattgggctccctcaaaaatttccaatgatcaagttgagggagtttttgcttatatcacccatacagctggttcaaccaagtcttttctcaggaaaggcaatgaggctcaccctgctgtcggtatagctggatttgctcctcctatgtttgcaaatacctaccagaatggagatgatgacgattttctagatcaggaagaagactccccagatgagaccaaagatgaagaatatgaaagcattgaagagaatcttagggagagcgattttcctgctgactcagacagtgagaatccaggaataagtcatgaatttggaaattcagatgacccaggatcagaaaatggtgatgtttcttttccaagtgacgcacccactcttggtggttccaagttcaatgcttttgcaggaaacatgcatgatacacctggtgaagtaccagcatcatggagcacacgcccacacctattcgcttatgcaaatgataactcagatggtgatgcttttgctgattcaccaaatggaagtccatcaccatggaattctcatactttagatcaaataacagatgctgatgtttcccggatgaggaagaagtggggcagcgctcagatgcctttcgttggtcccaatgcatctcaacagccgcggaaagatgttacaaaaggatttaagaagctattgaaatttgggaggaagacacgaggtgctgatggtttaaatgattgggtatccgcttcaactgcctcggaatgtgacgatgatatggaagatggacgagatttggccatgggatcttctgatgatttcaggaagtcaagaatgggttatccttctgcatatgatggttttgttgataccgatgtttttgctgaacaagaccaatcacttcgcagctccattccaaatccccctgcaaatttcagattgagggaggatcaactcactggaagctcacttaaagcaccgcgatcgttcttctccctctcaacgtttcgtagcaaggggggtgatgcaaggctcaggtga</cdnaseq>

Protein Sequence

<aaseq>MEPDAPLDFALFQLSPRRSRCELVVSGNGRTERIASGSVKPFVA HLRAAEEQAAAQPPPPAIRLQLDRRAAWFSKGTLERFVRFVSTPEVLEMANTFDAEMS QLEGARKIYAQGVAGGADGAESAAAADITKKELLRAIDVRLSALKQDLVTACARASSA GFNPDSVSELVLFADHFGANRLSEACNKFMSLCQRRPDICPHYSVSSTSSQWKSFDDG NVRGSSSSDMSLDETQADQGASSNKSIIGGSVSHIHRSNSQNSVDVPPEPSAVQHPKP TIQQSVEKQEKETDALPAPAPAGGGSRRLSVQDRINMFESKQKEQTSSSGNSAACTSK VVPTKGEHRRVPSGASMDKLVRRWSNVSDMSIDLSNNDSSSLNEKREIGTPVGTPTSA NLEVNSKARADGDANGLKHAVTSCQKDTSDALPLDSTTADAFSSSTLNTTSPSPLSAI ASSSPQKQTAPRVEDDMVITSSIESESSFRKEVGASQGKGDVRMSGQAVSSVSTRARV KTSPRPTWPENNVTLSSPPLSQEHVQMTDEETIPIVHEVAVKKEQIVQKDNRGSRLRS KEIHAEADVVGRKDRPSRTTGKISDTRTRATSNPRANFRGSSVRDEAASTEAEVHDVN LQRKSLARKVEDSGRKVAAGSEILPQSDCSIHQGTNLSRQSSSAEQELSLHGGKVKLI SDGNAVPLEQTKRPTKGSQDRHDELQKKANELEKLFAAQKLTSSRRGKSTDVQVENTP RVNEVKPPLVLPERIYTKQIVKESITNEFDANELLKMVDTEGYNNNVPQSIISLEESR GKFYDQYMQKRDAKLKEDWKLQGEQKEATIKAMRDSLERSNAEMRAKFSRSSSVPDST YISRCAHKFPPLQSVIKDKDQGIDSFLVEEEMNSDYLSGDGSSRSADSRKHFSNKVAC NQKKSIAPVHRHSSRTVSSGYANRRNLPDNPLAQSVPNFADLRKENTKPSAGLSRAAP RTQPKSFIRSKSIIEESKNISKDQSRKSQSMRKNLSPGELRDATSMNDVIYNWAPSKI SNDQVEGVFAYITHTAGSTKSFLRKGNEAHPAVGIAGFAPPMFANTYQNGDDDDFLDQ EEDSPDETKDEEYESIEENLRESDFPADSDSENPGISHEFGNSDDPGSENGDVSFPSD APTLGGSKFNAFAGNMHDTPGEVPASWSTRPHLFAYANDNSDGDAFADSPNGSPSPWN SHTLDQITDADVSRMRKKWGSAQMPFVGPNASQQPRKDVTKGFKKLLKFGRKTRGADG LNDWVSASTASECDDDMEDGRDLAMGSSDDFRKSRMGYPSAYDGFVDTDVFAEQDQSL RSSIPNPPANFRLREDQLTGSSLKAPRSFFSLSTFRSKGGDARLR</aaseq>

Gene Sequence

<dnaseqindica>331..389#472..651#755..857#978..1002#1470..1497#2486..2638#3222..5304#5549..6866#7139..7222#7364..7428#aatttttctcactgtcacagagcaccactgcagcaccaacaaaccaagcagctcatcttccagtcttccactcttcctctctctctagctcactctctctctttctctctcctcgcgcgagcgcacgcttaccggaatcgggggggcgagcggcggcgagatccgggcgggccgcggcgatctcgtcgccgcgggagctgcattggcgccggctcgccgccttcccggcgtttcttggggctgtcgcgaaggaggaggaggaggaggagagcttggggttcttggtgaggggatccaccagatccgacctcgccggcggcggcggccgcgatggagcccgacgccccgctcgacttcgcgctcttccagctctccccgcgccgctcgcggtgaggatttcgattgggggggggggggggggtggtgttcgtcctgtgggtgtttgctaatggtgggatgcctccgctgcaggtgcgagctggtggtgtccgggaatgggcggacggagaggatcgcgtccgggtcggtgaagccgttcgtggcgcacctgcgcgcggcggaggagcaggcggcggcgcagccgccgccgccggccatccggctgcagctggaccgccgcgccgcgtggttcagcaagggcaccctcgagaggtccgtttgctgccgtggcagttattgggttggttggtggtgtggagaattcggggagaaaaagaaatgatgggaattctgagaggtgttcttgtggttgaaggttcgtgcggttcgtgagcacgccggaggtgctggagatggctaacaccttcgacgcggagatgtcgcagctggaaggggctaggaagatttatgcacagggagtgagtggccaaagttttcttttctatattttctttcagttgtggagtgtgtttaggttgtgtggtttatggtggaatgatcttgcagttgttctaaaaatagtattatgctgtacgcaggttgccggaggcgctgatggagctggtatgcatgacaatgtttatagtgttcttttgtttgtcgaatggggttttgagtctcgttcgattagttttatgcctgtttttgttcatagttcatatgtcactcagtttatctacacttgaattgagtcgaatcgcgactcgagtgccttcacaagttatttgtgggaacatccagggagaacttttattattgattggcttgattactgagatgatgcattcaatgccactgtccatattattcatgctgtgaagctttgttaatgggggaatacagtaaataatccatttccaattttagaaagaaatgaacaacttaattaattgttgcatgtgttgaactgcaatattagggtacatgttttatcgttttaacatgccttcattgaggcaacatattgttcttctcaacacaatttgcttaccatcttacaaatttttttttcccgggtgaaaatgttgcagaatcagcagcagctgcagatattacgaagtatgcttctatgccatctctgtcattatctatttacttcttcattgtccgataaccttgatttaagtgagttgaacatggttaacccttacttcttcagggagaaccttgattgttatcaatttcagtcaatgatatatgatttgttaggactgttctatatataagaaatggttggttaagaactattcatgacatcgtactaaatacggagtggagatgcctgtgtcagaatactttaacatgactagtatttcgggcgttccttgatgaactgtttaatgcttattctgtctcaggggcctttcatgatcattttcccttttcggttgcttggggtgtagcaaactgtgttcatcctttcatctgtttactatgcttaaggacatcttttgtttcggcttacaacattataaaaacttgatgttcttaattgaatattagtaaaattgttgcagtcatgtagcaatgtgatctgctgcaaattttggtagacaaactcatcgcttgaatatgtagattgtagaatactatgataattagataaaggtgaaatgcttgatctcttttggttatgtgggtcagtgctgttaagagccctagttatatagctttacacaaatgagcacttacatccacgcatgcaccaaaaccttattttattatcgttgtgtatttctacatcattaattcagtctcttgcttatgctttactaattaaagttgttgctaaagcatcgctatcagtagtataggacttacacataatagctggtagaatataaatgattatactgtttcatctgtactcagtcttaaagttataattccttacaaatggcactgtgtaaatcatacaaaatatagttgtctgtactacttcatcacgtataacttgaaacttactgtaatttgcatataaagttagccatttttgtattgtcagtatccaaagttgatgccctggcctttttttttttctatgcaggaaggaacttcttagagcgattgatgttcgtctaagtgctcttaaacaagaccttgtcacggcttgtgcccgggcatcatctgcagggttcaaccctgacagtgtttctgagcttgttctttttgcagatcattttggtgccaaccggctgaggtatgattggaacttaacaagttcataatttaggttctaggtgtcatcatttatatttacttaaagaatacatttcacagaacttcagacactttaatagaaaagccacataaaactatagatttagaactaaataactcacaaaactactggtatctgtagagagaaagattatcattaacttttacaaatgccattatattgcgcactaaattgtacctagctcacctcaaacttgtacagtatgatggaaagctatgaacatacaaacttcagaattgcagtttaggacacacataaacttcaaacaccctaaggttattatggaaaagtggtaaagtttgcatgagaagattcttcaatgtactaggagggagatcatttgaagtggaatcttatatcagattcagttgtgcacacctatatgttcccaattcatccttatactgtggttgccatgatagcattgcgacattgagttaccctctgtcccactcgttttgtttctcggaggatccttttgtgacctcttgatgattattttttgtgcacacatgacaactttttttttttgggtatccagtgaagcatgcaacaaattcatgtcactttgccagcggcgtccagacatctgtcctcattactcggtgtcatcaacttcgtcacaatggaagagctttgatgatggaaatgtccgtggctcctccagttcagacatgtcactagacgagacacaagctgatcaaggtgcatccagcaacaaatctataattggtggtagtgtctctcatattcacagaagcaacagccaaaactcagtagatgttccaccagaacccagcgcagttcaacaccctaaaccaactatacagcagtcagtagagaaacaagaaaaggaaacagatgctcttcctgcccctgccccagctggagggggttcaagacggttgagtgtgcaagacaggataaacatgtttgagagtaagcagaaggaacaaacctcaagttctggtaatagtgctgcatgtactagtaaggtggttccaacgaaaggtgagcaccgcagggtgccttctggtgcgtccatggacaagttggtaaggaggtggagcaatgtaagtgatatgagcattgatctaagcaacaacgatagcagcagcttaaatgaaaagagggaaattggaacccctgttggaaccccaacatctgccaatttggaggttaattctaaggcaagagctgacggggacgctaatgggctgaagcatgcagttacatcatgccaaaaagatacatctgatgccttacccttggattctaccactgcagatgctttctcatcctcaactttgaatactacctcaccatcccccttatcagccatcgcttcttcttctcctcagaaacagaccgcacctcgtgtggaagatgacatggttataacctctagcattgagagtgagtcatccttcagaaaggaggtaggggctagtcaaggaaaaggtgacgtgaggatgtcagggcaagctgtttcaagtgtttccactcgagcccgagtaaaaacatctccaaggccaacatggccagaaaacaatgtaactttaagtagcccaccattgtcacaggagcatgtacagatgaccgatgaggaaactattcccattgttcatgaagtagcagttaaaaaggaacagattgtacagaaagataatagaggttctcgtctccgttctaaagagattcatgctgaagcagatgtggttggaaggaaggaccgaccctctcgaacaactggaaagatatctgataccagaacaagggccacctccaacccacgtgctaattttaggggttcatctgtcagggatgaagctgcctctacagaagctgaagttcatgatgttaacttgcaacggaaaagtctagcgcggaaggtagaggattctgggagaaaggttgcagctggctctgaaatactgcctcaatcagattgttctattcatcagggaactaatttgagcagacaatcatccagtgctgaacaggaattgagtttgcatggaggtaaagtcaaattaattagtgatggaaatgctgttcctttggagcagactaagagaccgacaaaaggtagtcaagatcggcatgatgaactgcaaaagaaagccaatgaattggagaagctatttgctgcacagaagctaacctcttctaggagaggcaagtcaactgatgtgcaggttgagaacacacccagggtgaatgaggtaaagcctccactggttcttccagagaggatttatacaaagcaaattgtaaaggagagtataaccaatgagttcgatgccaatgagcttttaaagatggtggatactgaagggtataacaataacgtaccacaaagcattattagcttagaagagtcaaggggaaagttctatgatcaatatatgcagaagagggatgcaaaactaaaggaagattggaagctgcaaggagaacagaaggaagcaacaataaaggcaatgcgtgatagcctagaacgaagcaatgctgagatgcgggccaaattctctcggtcttcaagtgttcctgattcaacatatatttctcgttgcgctcataagtttcctcctttgcaatcagttataaaggataaggatcaggtattaaattctacttatagcagtttttaagtagaaaacagtagtacagaaaattacttaactacacacccttagtgcattgatgtgatttatactgaaggttgtttttttatgtaaaaaaatttaatactaaacaatcatgatatgtgtatcttgaggagcccataaggctataattctacgcaaagtgaaatgatgagttgtagtttatggttgtttatatttttgattttgcctttcccaggggatagattccttcttggtagaagaagaaatgaatagtgactatctatctggtgatggttcatccaggagtgctgattccaggaagcatttttcaaataaagttgcctgcaatcaaaagaagtctattgctcctgttcataggcattcatcaaggaccgtaagctctggttatgcaaaccgtaggaatctaccagataatcctcttgcacagtctgtccccaatttcgcggacttaagaaaagaaaatacaaagccctcagctggtctgagcagagctgctccaaggacccagccaaaaagttttatccgtagtaagagcatcattgaagagagtaagaatatatcaaaagatcaatcgaggaaatcacagtccatgaggaagaacttaagtcctggtgaattaagggacgctacatccatgaatgacgtcatatacaattgggctccctcaaaaatttccaatgatcaagttgagggagtttttgcttatatcacccatacagctggttcaaccaagtcttttctcaggaaaggcaatgaggctcaccctgctgtcggtatagctggatttgctcctcctatgtttgcaaatacctaccagaatggagatgatgacgattttctagatcaggaagaagactccccagatgagaccaaagatgaagaatatgaaagcattgaagagaatcttagggagagcgattttcctgctgactcagacagtgagaatccaggaataagtcatgaatttggaaattcagatgacccaggatcagaaaatggtgatgtttcttttccaagtgacgcacccactcttggtggttccaagttcaatgcttttgcaggaaacatgcatgatacacctggtgaagtaccagcatcatggagcacacgcccacacctattcgcttatgcaaatgataactcagatggtgatgcttttgctgattcaccaaatggaagtccatcaccatggaattctcatactttagatcaaataacagatgctgatgtttcccggatgaggaagaagtggggcagcgctcagatgcctttcgttggtcccaatgcatctcaacagccgcggaaagatgttacaaaaggatttaagaagctattgaaatttgggaggaagacacgaggtgctgatggtttaaatgattgggtatccgcttcaactgcctcggaatgtgacgatgatatggaagatggacgagatttggccatgggatcttctgatgatttcaggaagtcaagaatgggttatccttctgcatatgatggttttgttgataccgatgtttttgctgaacaaggtattttcgcttgccgatttatctccactctctgtttccattgtcaacaaaagtccctacttattggtgacgttcgaggaaccccctccaaaggaccagacccaaaacttgaataaaagaatatgatttcctagattgtcatattcatgtgatcttgaaagtatttttttttctcattcatgtgttttccttacctcattcattaactctttgctatacacacttgtctgcttagttttgcacacccgtttaattaattttttaatttgcagaccaatcacttcgcagctccattccaaatccccctgcaaatttcagattgagggaggatcaactcactggaagctcacttaaaggtacacttacagttacagatatatactactagtaccttattttttttattttaagttgctaatgtaccacataacatatgaagtttttgcttcttatttctgtctatcaatattaatatgttctccccccaaaaaatgcagcaccgcgatcgttcttctccctctcaacgtttcgtagcaaggggggtgatgcaaggctcaggtgacaatgtgacatacccttaagcaccagagctggagtatataaaatatctcccgaaattaggtaccggtatcaaattttcatggatggtacgcggacactgctagcttgtcttataaatacaatatattctgtatctatagtaattcatataagctgccagttgagcgtttcctctgttgtttgattattctttttcctatcacttgtgtagaattggacctctagatttttttttctttcttttgcggtatttgatttcaattggcccagagacactgtattcattttgttgtttttgtgatatgcttgtatcttccacccccatttgttcattcacatatatcacaaattcgcggtatatgacaatcttgccaacatgagcctagaaatttctgaaaggcatcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0616000, RefSeq:Os07g0616000