BGIOSGA014172

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Revision as of 03:54, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014172| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014172, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA014172

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014172, complete gene.

LocusTag

OSJNBA0015K02.19

Ensembl Transcript ID

BGIOSGA014172-TA

Ensembl Protein ID

BGIOSGA014172-PA

Length

6038

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32829717..32835754

Sequence Coding Region

32835575..32835754,32834927..32834965,32834724..32834777,32834570..32834633,32833845..32833903
,32833073..32833197,32832862..32832921,32832613..32832671,32831847..32831920
,32830360..32830398,32830220..32830282,32830069..32830116,32829856..32829984
,32829717..32829764

Genome Context

<gbrowseImage1> name=IndicaChromosome04:32829717..32835754 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:32829717..32835754 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGTCCGAGAGGCAGGAAGCGTGCGGCGGCGGCGGCGGCGGTGGCGGAGGAGGACTCCAGCAAGCCGGAGGCTGCAGAGGCGAAGAAGCCGGCCGCGCGGGGGCGGGGGAAGCGTGCCAAGGCGTCGCCCAAGCCCAAGCCGGAGACGGAGTACTTCCCCGAGAAGCGGAATCTGGAGGATCTTTGGCTATCAGCATTTCCGGTTGGGACCGAGTGGGAAAACATTGATAAGATAAAGGAGTTCAACTGGAACTTTGAAAATTTGGAGAAAGCACTAGAAGAAGGAGGGGAGCTTTATGGGAAAACAGTTTACTTGTTTGGAAGCACGGAGCCTCAACTATTGGAGGTTAATGGTGAATCGAAGATAGTGCTTATTCCTATAGTTGTTGCTGTTGACTGCCCTTTTCCTCCCTCAGACAAAATTGGCATAAATTCTGTCCAAAGGGAAAATGAAGAGATAGTGCCAATGAAGGCCATGAAGATGGCCTGGGTGCCTTATGTTCCGCTGGAGGATCGGCTTAGTAGGATTGACAGTTTGAAAACAAAAATATTTACTCTTGGCTGCACCCAGCGGAGGTCTGCGCTGAGGCACCTCAAAACTGAGAGAGTCAAATTGTTTGACTACTGCATGCCATATTATATGCCACTGAACCCTCCCGAAGACGAAGATGATACAGTTGTCAACATCATATATCCCCTAGAACCCCCGATAGTATGTGACTTCGACTGGGAGATGGATGATTACGAGGACTTTGCTGATGAGAAAGTTAAAGATGAGGTGCTACCAGAGGATGAGAAAGAAAAATTTAAGGAATTCATAAAGGAGAGGGTTAGAGAAAGGAAAAGAGAGCTAAAACAGGCTAAGGAAGCAAGAAAGAAAGCTATTGATGATATGGACCCTAAGGTCAAAGAGGCATTTGAAAATATCAAATTTTACAAATTTTATCCTGTAAAAACTCCAGACACCCCTGATGTAAGCAACGTAAAGGCAAAGTACATCAATAGATATTACAGGCATGCACATCATCTGATGTAA</cdnaseq>

Protein Sequence

<aaseq>MARPRGRKRAAAAAAVAEEDSSKPEAAEAKKPAARGRGKRAKASPKPKPETEYFPEKRNLEDLWLSAFPVGTEWENIDKIKEFNWNFENLEKALEEGGELYGKTVYLFGSTEPQLLEVNGESKIVLIPIVVAVDCPFPPSDKIGINSVQRENEEIVPMKAMKMAWVPYVPLEDRLSRIDSLKTKIFTLGCTQRRSALRHLKTERVKLFDYCMPYYMPLNPPEDEDDTVVNIIYPLEPPIVCDFDWEMDDYEDFADEKVKDEVLPEDEKEKFKEFIKERVRERKRELKQAKEARKKAIDDMDPKVKEAFENIKFYKFYPVKTPDTPDVSNVKAKYINRYYRHAHHLM</aaseq>

Gene Sequence

<dnaseqindica>1..180#790..828#978..1031#1122..1185#1852..1910#2558..2682#2834..2893#3084..3142#3835..3908#5357..5395#5473..5535#5639..5686#5771..5899#5991..6038#ATGGCGCGTCCGAGAGGCAGGAAGCGTGCGGCGGCGGCGGCGGCGGTGGCGGAGGAGGACTCCAGCAAGCCGGAGGCTGCAGAGGCGAAGAAGCCGGCCGCGCGGGGGCGGGGGAAGCGTGCCAAGGCGTCGCCCAAGCCCAAGCCGGAGACGGAGTACTTCCCCGAGAAGCGGAATCTGGTGAGGAGGAGGCTTCCCCGATTACCTGTCTCGGATGCGTGCTTCGCTTCGCTTCGTTATGCCCCGATTAGGTTGGGGGGTTTGATTGGTCTGGATTCGTTTTGGCGTTGTGGACCGCGTGGTGTATTTGGTTGCTGCTTCTGCGGCGAGATTCGTAGTGGTCGGATTAGTCCAAATGATGGTAATGGTGGTTGATGTTGAAATACGAATGGTTAATATGTGACTGGATTTGGCTGGACTATAGGGGCTCCCCATTTCATTAGGAATAGTTTTTGTGTTGAATGTTATGTTGTAGAGTTTGAGCCACATCTGCGTGGGACTGAATTGTACAGTTTATGTTCTTCTAAGTCAGTGTTAGGAATAGTTTTTTTATTGTGAAGTGCTTTGCTATATGAAACGATTACTTGAATTTGTTATCGTGAAGTTTGAGCTATTATTGGAACGATGAAAACTCACATGGGTTTATTTAAGCAGTTCTAGGGCAATTAATTGTTTGGAAATGTGTTTGATGGATATAAAAGGAACGTTTGAGCATAATCAGTTTGTCTTTGCAAACAGGCAAAATGATTACTTATAGTTTTATGGCTAATATTGTGTTACTGTGTTCAGGAGGATCTTTGGCTATCAGCATTTCCGGTTGGGACCGAGGTTTGTTACTTTCTATGGGCCTATCTATTTCTTTCTTTTTTATTTATGGCTGAGTCAATTAGTGATGCATGTTTTGACATACATTCAACTGTGTACTATGGATATTTGCTCCGCTAACTATTATCCATATCCGGGCCTCTCATCTGCAGTGGGAAAACATTGATAAGATAAAGGAGTTCAACTGGAACTTTGAAAATTTGGAGGTACGATGGGCACATAGTATTCCAATACTACTCTTTTTTTATTATCACACTTGCTTTCAGCATGACATAAGGTTTCCTGTTGGTGAGCAGAAAGCACTAGAAGAAGGAGGGGAGCTTTATGGGAAAACAGTTTACTTGTTTGGAAGCACGGAGCGTAAGTTTTCATACTCGTGCTAGTTTTAAAATTAAATCTCCAGTTCGTGATACATATATTCTCCTACTGGCTTGCTAGCATTTAGTAACTGAACTAAACTGATTATATTAGCTTGTTTTTTTGTGTACTTTATGACATATAACTTGAAGGCCTGTTTTGAATGGTTTAATTTCACAGAAATAGTTATTCCCACAAGAACCATGTTATTTTTCTTTTTTGACGTTCCTGACAGACCTAAATATCAAATCTATCAGTTTGTTTGTTCCCCTGAAATTCACTAATTATGACTGCAGTAGCACCCTGAGAAAATTATATATTTCTCTGAACTTAGATGCACATTGTTGTAGATATACACTTGCATGTTTTTGTCATTACTGAAAGATTCTCTGGACATTTCCAACAATGAAATTGTCCCCTTTAGGACCATACTTCTATTTATTTCTTATGCTGTTTTTCCATGTCAATGTTCGAGTCGCTACTGCCTTTCCTAAGTTGATTGGTATCAGCATTTATTTGTTTTACCATGTGCACTTTAGATATGTTGGGTGTTGTCGTGGAAAAATGTTTTCTTGTCTCTGATATTTTCATTTGTTCTTGGGATGTGCCAGATTGTTTAAAAATCATCGATACAGTTTATCTGATTAAATTGTTTTTGCTGACATGCAGCTCAACTATTGGAGGTTAATGGTGAATCGAAGATAGTGCTTATTCCTATAGTTGTTGCTGTAAGTTCGCTTCCATTCTCTTGATATGGAAATTTGCATGAGGAAACAGTCCACTTTAGCAAATACTCTTAAATCTGAACATTTATCTCATGCTTATGCCAACTTGACATCTTATCCCGTTTATGCACCATCGCTAACAAGTTGATTTTACTAAGGTGACTATGTTTGTACTTCCTACCTCTGTCATTTTTGAAAGATGCCAGTACAAACATAGTCACCTTAGTTTCATAAAAGCCAATGGGAGTAATTTCCTTGGCGCTGTTTGGAAGAGCTAGCTGCAGCTAGCCAGCCAGCAGCTACAGGTGCTGCAGCCTGCCAGCAGTAAGCGGCTGCTTCCTGCAGCAGCCAAATACGCTGTGCCGCAGGGCTGGGCAGGGCAGCACAGCATAGCCTAGAACACTGCAGTAATGGCCTACCCAATGCCCCCCTTTTTTATATCACACTATTTTACTCTGGAATTTGTTTGTTTGCTCTTTAACCCTAACCTCTTTAAAATTGAGTATACAGTGCAATTTGGAAAACATTGTTTGGATACTTTATGGTTACAACGTCATTGGCAGTTGACTTGTTTATATATTACCGATTTTACTATTTACTTGCCTCATGTTGAATCTCATTTAGCACTTGCTACCTTTTCTGTGCTGCAGGTTGACTGCCCTTTTCCTCCCTCAGACAAAATTGGCATAAATTCTGTCCAAAGGGAAAATGAAGAGATAGTGCCAATGAAGGCCATGAAGATGGCCTGGGTGCCTTATGTTCCGCTGGAGGATCGGTACTCCCATACTATTAATTCTGAACAATATTTCTTACCATTTCTTTTGAGAACCTGTATCCTTACCTTGCTCCCTCATTAATGGCTTCTGTTTTTACCAATCATCATATGCAGCTTTGTGTTTTACTCATTCTTTTTTGTTGGTCTACAGGCTTAGTAGGATTGACAGTTTGAAAACAAAAATATTTACTCTTGGCTGCACCCAGCGGAGGTTAGTAATTCATGCTTTTTCCCTCCTTACTCGCGATTAATGCTTTATGGCATTTCTGGTTCTATTTTATTTTTGTTTGTTTGTTGGAACGTTATCATCCAGAAGCATGCAACATAAATTAACTGTTAACATCTTTCCCTAGATTTTTTTCTGACTAATTCTAGAGTATCCTCATTTGTATGTTTTGCAGGTCTGCGCTGAGGCACCTCAAAACTGAGAGAGTCAAATTGTTTGACTACTGCATGCCATGTAAGCTGACTTGGGATTATTTCTGTTGGCCTGTTTTGTGTGTACAAATATCTGTTTTCATAGGATTCTTTGAGTGCCTGTTAACTTGAGTGTGGTTCCTTGGCTTGGTCCAGTCCAATTGCAAAATATCCTGCAAGACATCGATGATGTCTTAGTTAAATGGTTGCAATGTCAGTATGCCATGGGATAAGAAGCTTTTTACTAGTCATTCTTTAATTCATTTCCATTCTGTTTCTGTATGACAATTTGTTAATTTCATTGGAATGGGTGAACGCTAGATATATTTACCTGCTATTGCTGCCATGCCTTTTGACTTTGATGAGCTTTTTAGCTGGCTTATTTGCCTGCGTTGGATGGTTAGTACTTAATTTTAATATAATAATTTGATGCCATTTACATATCCTGTGTTAACTTAGGAAGGCACTTCTTTCCAGCTATGTAACACTGTCTGTAGTGAGCCAGTTTTCAGTGTTGTTTGTGCCTTTAATGTTAGCAATTGTGGCACAAACATAGGCACACTGTGTAAGTCTTGTTATAAAGTGTGTGAGCATGGCGCAAGGTCAACAATCATGCTCAACTGGTTGATCAGATCATTTTATTTACATTGTTACACTTATATGATGCAGAGTGTTTTATGAAAATGGCTGAGAGTGATGTAGTCTGCAAATGAATCTCGTTTAATGTTGTTGCAGATTATATGCCACTGAACCCTCCCGAAGACGAAGATGATACAGTTGTCAACATCATATATCCCCTAGAACCCCCGGTAATCTTCTCTTAGTGTTTTTTGTTATTCCAGTATTGCCTAATAAATTTTCCTCAACATAAGCTATTAGTTTATTTTATGGAGGTATCTTATTAGTGCAAACCTAAAATATTATGTGTAATGGGCAAAACTAAAATAAATTTCTTGGATTGTGATCTTAATTAGGCCTATATTTGGGATTCATTAAGTCAGCTAGTCATTTTAGGGAAGAGCCCAGATGCAGCTGTATCTTCTCCACTGCTATAAACTGCATTGTTAACCTGGGCACCTGGCCTATGTGAGAAGATAAAATTTATCGTGTTTCACTGTTTCCTGCAGCTAAGAATTGATCTTCTCTTATTTGTATGCATCTCTAGGCTGCTTGCATCCATGTCATGATTGCCAGTTATGAATTCGTGTTCTTTTGCTTCATTTGCCTTAGCTTGTGAGGTCAAAACCAACCCACATGCTGCTGGTTCCCCTTGCCTACTTCTATGAAATCGTGACTTTTGCTGCTGTCATTTCTCGCGCTAGCACTCCTGCAATGTTGTATTGTTGTCACCTTCACTATTTTCAGTTGGATGCTTCTGAAGTTTGGTGTCTTGTGTCTGTTGAGTCAGGAGATGTGTACTTCTTTATGCTTCATTAATCTGAAAAAATATTTCCTATTTTGGTTTATTTATGTGTGCTTCTAGTTGCCTCTGCATGCGGACTATTTTCATCTTTAATTGCTTCTGTGTGCTGATTGTTTTCCTCTACGATTGCTGCTCCAGGATGATTATTTCCTAACTGCTGCCACATGCTTATAAATTCCCTCTTAATTGCTGTTGCATAGACGTACTGATTGTTTCCCTCTAAATCGAATAATTGCTGCTTGCTGGGCTGGCGTTATGGCATTGCTTAGTCTGTCAGCATAATTGCATAGGTGTACATGTGGTGTTTTCATGCCACCTACACTCAAGTTTGACCGGTAGGCAGTTGTGCAATCATGTCAGTCTTGATCTTTCAGGCTGGTCACTTACAGGTTGTTTTGGTTTGAGGAATCACCACATGAAAACCATCTTGGACAGGACGATCCATCATAGGATCATCCCACAAAATCTGAGGAATGGCTCCATTCCTCATCCAATAGCTTAGCATTTGCTTTTGAGGAATGAGGTGATGGACAAACCCATTTCATTCCTCGAACCAAACAGGATCACTATTGAGTCACTGGATGGAAGCTTAGTTGCAGTGTTTATTTCCTGCTATTGATACAAACATTTCATTGTTCTGAAGCGATAATGTAGCCTGAGTCACTTGGTTCTTAGCTGATATAAACACTGAAGTTATTATGTTCACGTAGATGCCTCCAATGTTGATATTTATTAGATTTACTTGTATTGCTTATGTTCACCTAGATGCCTCCAATGTTGATAACGTAGCAGTCATCAAATTATTTTGTATTCACATTGTACTGCTTATTGCAGATAGTATGTGACTTCGACTGGGAGATGGATGATTACGAGGTTTGTACTAATTTGGTTGTTTTGCTTGATGCTTCCTATGAAAGGCACCTGCATTGAGTCATTCTGTTGCAATGCAGGACTTTGCTGATGAGAAAGTTAAAGATGAGGTGCTACCAGAGGATGAGAAAGAAAAATTTAAGGTGCATCTTAATTTTTTGCTTAAGCTGTCAGAAGAATAGTCAGTCTATAATAATTACCTCACTGAGTACTCCTTCCTAACTGCTGACACATTTCTTTTAACAGGAATTCATAAAGGAGAGGGTTAGAGAAAGGAAAAGAGAGCTAAAACAGGTCATAGTCAAACGAAATGTTAATTGCCTTCACCAGATACTTTAATGCATTCAAGTACTAACTGTTTCTCCAAATCTTATGCAGGCTAAGGAAGCAAGAAAGAAAGCTATTGATGATATGGACCCTAAGGTCAAAGAGGCATTTGAAAATATCAAATTTTACAAATTTTATCCTGTAAAAACTCCAGACACCCCTGATGTAAGCAACGTAAAGGTATGTGACATTGCAGCTCAGGTGTATCTTGGAACAGTTGATTATGCATATAGTTGTCTTGGCTTTAACTCCTGTATCTACTGTATTGCAGGCAAAGTACATCAATAGATATTACAGGCATGCACATCATCTGATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014172

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA014172&oldid=63066"