Os05g0276500

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Revision as of 10:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0276500| Description = Expansin Os-EXPA3| Version = NM_001061612.1 GI:115462954 GeneID:4338278| Length = 1781 bp| Definition = Oryza sativ...")
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Gene Name

Os05g0276500

Description

Expansin Os-EXPA3

Version

NM_001061612.1 GI:115462954 GeneID:4338278

Length

1781 bp

Definition

Oryza sativa Japonica Group Os05g0276500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:11404176..11405956

Sequence Coding Region

11404443..11404752,11405334..11405655,11405755..11405890

Expression

GEO Profiles:Os05g0276500

Genome Context

<gbrowseImage1> name=NC_008398:11404176..11405956 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:11404176..11405956 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctctctggaatggagaaacaacctgcaatgcttctcgttcttgtgacactctgcgccttcgcatgcaagcgatccgtcgcacagtctgcctttgccacgttctacggtggcaaggacgggtcgggcaccatgggtggcgcgtgtgggtacggtaacctgtacaacgccgggtacgggctgtacaacgcggcgctgagctcggcgctgttcaacgacggcgccatgtgcggcgcgtgctacaccatcacctgcgacaccagccagaccaagtggtgcaagcccggcggcaactccatcaccatcacggccaccaacttatgcccgcctaactgggcgctgcccagcaacagcggcgggtggtgcaacccaccgcggcagcacttcgacatgtcacagccggcctgggagaacatcgccgtctatcaagccggcattgtccccgtcaactacaagagggttccgtgccagaggagcggggggatccggttcgcgatcagcggtcacgactactttgagcttgtgaccgtgacgaacgtgggcggcagcggcgtggtggcgcagatgtcgatcaaggggtccaacacgggctggatggcgatgagcaggaattggggcgccaattggcagagcaacgcgtacctcgccgggcagagcctgtccttcattgtgcagctcgacgacggccgaaaggtcacggcctggaacgtcgccccgtccaactggttcttcggtgccacctactctacctcttgggtgcagttctga</cdnaseq>

Protein Sequence

<aaseq>MLSGMEKQPAMLLVLVTLCAFACKRSVAQSAFATFYGGKDGSGT MGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITI TATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSG GIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQ SLSFIVQLDDGRKVTAWNVAPSNWFFGATYSTSWVQF</aaseq>

Gene Sequence

<dnaseqindica>1205..1514#302..623#67..202#acaaaacgaaaacctaaagaatcaccagccttgcaaaccaatcaacctgtctagattaatttttgcatgctctctggaatggagaaacaacctgcaatgcttctcgttcttgtgacactctgcgccttcgcatgcaagcgatccgtcgcacagtctgcctttgccacgttctacggtggcaaggacgggtcgggcaccatgggtacgtacatttcaagcttaatttgatattttctcaaacaaattagctgatgatgatgatgccatttctgaacttggatgtacgtgcgacgcgatgcaggtggcgcgtgtgggtacggtaacctgtacaacgccgggtacgggctgtacaacgcggcgctgagctcggcgctgttcaacgacggcgccatgtgcggcgcgtgctacaccatcacctgcgacaccagccagaccaagtggtgcaagcccggcggcaactccatcaccatcacggccaccaacttatgcccgcctaactgggcgctgcccagcaacagcggcgggtggtgcaacccaccgcggcagcacttcgacatgtcacagccggcctgggagaacatcgccgtctatcaagccggcattgtccccgtcaactacaagaggtacatgcatcctactcctagttgaataatagccgaaatcgttatagatcaaagatcaatcggagatatatatatgtttgaagtgtttttttttactcgaattgatatacacactcactagctagctcatgaaggcacatcgataacgggtctagaaggattataggttcatgcttgtttcatgctagcaccaatttttcagtaccaatgctatcgatcactagttctagttttgaaacggcttatatgtatcgatactagtgtaaaaccagtacctaccagactaccagagatgggctaacagactcaaagcaggtactgtaatagactataaatcggctacaaacttatgtagagtagataagagaggagagataagagaagcggactacttagccagctgcagcacgtacatagatactgacgatgatttggagctagtaatttactatactattaaacttgctctcataattaccggtgctagactagaaacggcacctataatctgacataggtgcacacagctagtagtaaggtttctcaaaaaacctcacaaatgctgcttgtgtccaatgcagggttccgtgccagaggagcggggggatccggttcgcgatcagcggtcacgactactttgagcttgtgaccgtgacgaacgtgggcggcagcggcgtggtggcgcagatgtcgatcaaggggtccaacacgggctggatggcgatgagcaggaattggggcgccaattggcagagcaacgcgtacctcgccgggcagagcctgtccttcattgtgcagctcgacgacggccgaaaggtcacggcctggaacgtcgccccgtccaactggttcttcggtgccacctactctacctcttgggtgcagttctgaagtactgcaacgtacgtacaggtttagttgataaattatacacatgctgttcatggacataattaattaattactagccatcccggccgtttgtgcatgttctgctaggttgtgtgttgcgtggcattaacttgtttttctctgttaccagtcgttttgtcaaacgcgttggttgtggcaagcgcgattgaatgttttgcccaccaattaatgtaactgatcgtatgggtgttgagttaataaattatgtttaattatgcggatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0276500, RefSeq:Os05g0276500