Os05g0277000

From RiceWiki
Revision as of 10:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0277000| Description = Similar to Expansin Os-EXPA3| Version = NM_001061613.1 GI:115462956 GeneID:4338279| Length = 1006 bp| Definition = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0277000

Description

Similar to Expansin Os-EXPA3

Version

NM_001061613.1 GI:115462956 GeneID:4338279

Length

1006 bp

Definition

Oryza sativa Japonica Group Os05g0277000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:11429537..11430542

Sequence Coding Region

11429537..11429843,11429990..11430308,11430422..11430542

Expression

GEO Profiles:Os05g0277000

Genome Context

<gbrowseImage1> name=NC_008398:11429537..11430542 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:11429537..11430542 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaatgccagtagtacaagtgcttcttctttgcgcattagcttatcaagcagtcgacgcccagtggacaccagccacggcaacgttctacggcggcagcgatggcgctggtaccatgggaggcgcgtgtggatacggcaacctgtacaacgccgggtacgggctgaacaacgcggcgctgagctcggcgctgttcaacgacggcgccatgtgcggcgcgtgctacaccatcgcctgcgacaccagccagtccacgtggtgcaagcccggcacgtccatcaccatcacggccaccaacctgtgcccgcccaactacgcaaaaaaaagcgacgccggcgggtggtgcaacccgcctcgcaagcacttcgacatgtcgcagccggcctggacctccatcgccatctaccaagccggcatcgtccccgtcaattttaagagggtaccgtgccagaagagcgggggcatcaggttcaccataagcgggagggactacttcgagctggtgacggtgttcaacgtgggaggcagcggcgtggtggcgcaggtgtcgatcaaggggtccaagacggactggatggcgatgagcaggaactggggccaaaactggcagagcaacgcctacctcaacacccagagcctgtcgttcaaggtgaagctcgacgacgcccgcgaggtcacggtgtggaacatcgcgccctccaactggaacttcggcaccacctacacgtccaacatcaacttctag</cdnaseq>

Protein Sequence

<aaseq>MAMPVVQVLLLCALAYQAVDAQWTPATATFYGGSDGAGTMGGAC GYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLC PPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTI SGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKV KLDDAREVTVWNIAPSNWNFGTTYTSNINF</aaseq>

Gene Sequence

<dnaseqindica>700..1006#235..553#1..121#atggcaatgccagtagtacaagtgcttcttctttgcgcattagcttatcaagcagtcgacgcccagtggacaccagccacggcaacgttctacggcggcagcgatggcgctggtaccatgggtacgttcgtttatcttcctccatttctgcaaaacgttttctttttttttttcctttctggagaaatgtgcatgcatattgatgatgttgattgtgcgtgcatatgcatgcaggaggcgcgtgtggatacggcaacctgtacaacgccgggtacgggctgaacaacgcggcgctgagctcggcgctgttcaacgacggcgccatgtgcggcgcgtgctacaccatcgcctgcgacaccagccagtccacgtggtgcaagcccggcacgtccatcaccatcacggccaccaacctgtgcccgcccaactacgcaaaaaaaagcgacgccggcgggtggtgcaacccgcctcgcaagcacttcgacatgtcgcagccggcctggacctccatcgccatctaccaagccggcatcgtccccgtcaattttaagaggtatacgcgaaatcgcaaaacacaagtcactactacagaaaccggccccttcatatatgatatatatcgatcggttcgttgtgtcaggttttaaaccggcagtgacatgaacatgtgcttatgagcggctgtgtgtgcatttttagggtaccgtgccagaagagcgggggcatcaggttcaccataagcgggagggactacttcgagctggtgacggtgttcaacgtgggaggcagcggcgtggtggcgcaggtgtcgatcaaggggtccaagacggactggatggcgatgagcaggaactggggccaaaactggcagagcaacgcctacctcaacacccagagcctgtcgttcaaggtgaagctcgacgacgcccgcgaggtcacggtgtggaacatcgcgccctccaactggaacttcggcaccacctacacgtccaacatcaacttctag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0277000, RefSeq:Os05g0277000