Os07g0103500

From RiceWiki
Revision as of 20:29, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0103500

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001065225.1 GI:115470182 GeneID:4342182

Length

5766 bp

Definition

Oryza sativa Japonica Group Os07g0103500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:212778..218543

Sequence Coding Region

217214..218239

Expression

GEO Profiles:Os07g0103500

Genome Context

<gbrowseImage1> name=NC_008400:212778..218543 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:212778..218543 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggagcacgactacgactccaactcgaacccgccgttgatgagcacgtacaagcacctgttcgtggagcagcaccgcctggacatggacatgggcgccatcgacgtcgacgagtgcgagctccctgtgatcgacctcgcggggctcatggaggcggagcaggtgtgccgcgcagacatggtgcgtgcggcgtcggaatggggcttcttccaggtgaccaaccacggcgtgccgcaggcgctgctgcgcgagctgcacgacgcacaggtggccgtgttccggcggcccttccaggagaaggtgaccgagaggctgctcggcttctcgccggagagctaccggtggggaacgccgacggccaagtgcctggagcagctgtcgtggtcggaggcctatcacatcccaatgacgacgcccaggcccagcacgagcatcagggccagggcggtgatcgaggaggtgtcgagggcgatgtacgagctggcgcagaagctggcagagatcctgatgagagggctgccgggcgccggcgagggcgagacgatggtgacgacgcgggaggagacgtgcttcctgcggctgaaccggtacccaccgtgcgccatggccatggggggcttcgggctgtgcccgcacacggacagcgacttgctcaccatcgtgcaccagcagcaggacaccgtcggcggcctccagctgctcaagggcggcaggtgggtggccgtgaagcccagccccagcaccctcatcgtcaacgtcggcgacctcctgcaggcgtggagcaacgatgtgtacaagagcgtggagcacagggtgatggccaacgccacgctggagcgcttctccatggccttcttcctctgcccctcctaccacacgctcatcatcccaagcagcagccatgtccacgacgacgatgcccattaccggagcttcaccttcggcgagtacaggaagcagatcatggaggacgtcaggagcacaggccgcaagattggactgcaccgctttcgaacccgatag</cdnaseq>

Protein Sequence

<aaseq>MEEHDYDSNSNPPLMSTYKHLFVEQHRLDMDMGAIDVDECELPV IDLAGLMEAEQVCRADMVRAASEWGFFQVTNHGVPQALLRELHDAQVAVFRRPFQEKV TERLLGFSPESYRWGTPTAKCLEQLSWSEAYHIPMTTPRPSTSIRARAVIEEVSRAMY ELAQKLAEILMRGLPGAGEGETMVTTREETCFLRLNRYPPCAMAMGGFGLCPHTDSDL LTIVHQQQDTVGGLQLLKGGRWVAVKPSPSTLIVNVGDLLQAWSNDVYKSVEHRVMAN ATLERFSMAFFLCPSYHTLIIPSSSHVHDDDAHYRSFTFGEYRKQIMEDVRSTGRKIG LHRFRTR</aaseq>

Gene Sequence

<dnaseqindica>4437..5462#cttccactgtgttcctaattccttccctgcaattattggttgctgcttcacttgatcttattggcaaccagctagctaagcttatacacacccacggccagacctgaaccttctacctactaccgcacaaaaacaacaagctacctagctctctaacaacaatctcatttgcatgaatcgcaggagatcgatagtagctactagttagcaagttcatatatagatcgatctatgatcgatgctagctagctaatagtatcatcgatcgggaaaacagacacaaattagagctagctagagcccccgccggccgggtcgacgtactgctgctaatcaatagccaggtttgtttgatcgatactaattaacccattaacatctatctctgcaagtttattgatctgtgatccctgcagtacgctagctagtagttaattgtttcttccatgcattcatgtttaattttccagctcttcaattctgcacatacggtatatatatagacaagtctagctagctatacatgcatgaatgcatcaaccaattaatttaattttgcacctcctgacaatatattgttttaattctgcacctgaatgcatgcatcgacaatatatacgtactccgtacgagtacgattgatagatcatgaactataaaattaataatatgcatcgcgcccctgaaaaaaagaaaattaacatgcatcacatatacatatacataaaagttagttagtcaggaatggttactggcccttgatcagtacgtaacaacaacgaaactgagactcgatcatcttgttgctaggctcgagcgagtatacagtacatgcatgtggattaattgagaacaagaacatactattggagacagaaagtattttctacatctagatgccatacaacaatcaatcttaattagtggagtacaattttactcagtcgagccgcatgcacatggcatgcaggagccaggagcgagtcgatcagctagctagctagccagcacattcatgatcatgtgctgcaaaacactactgcatactcctatgccgccaataatcttgttattactccttgcaatcgatcgttaaccccactgccacccccatcttttcttcttatgtgcatgctgtccttgattagtctacatgcatgtaatttcctatgaattctctcaagttcatcatgtctacagtctacccaagaaaaaataaagccttaagttcatcatgaatttttttttgagaaaaactgatgatttggtacaagattaatctaaatataccaattttaggatcaaattcaacacacatattgagggaaaaatgacaaatctaacctatttgcaccattcattaccgttttgtttctctctttttctcttaatttgtaggatgagtttagacatgatttttttaatttcattattatctatttttttcattttgttcagaatttttcatgattaattgttttattgtatttgagaaatgatagaatacacatgcgagatatacagtcgggaggaaggagaacccccctccagctgggtttgattttcttgacctagaaaaactaggggatcgaggcccccctaagtaggtaattttccattaaacagggataatgttaatttattgcgctcaattggttttgcatgtttgttgagttttttttgggatctatagtttttggaacttaattaaatcacaataattatttattttttctgaaataaaagatgacattgaaacaagcattgttcctaggttaattaatttatatataggtccagaattccatttttttttgatatagtgtttgtgcttccttaggagaattttttttaaaaaaattgaccactttgtttttttttgctagaatatttaatttgttttatgagttcacaacttttttgtttgagttgcaaaattgaacaagacgtacatgcattagacttttgatcgacaatttttctttgtcaaaggacgaagggtgtatatatatatatatatatatacatatacatatatatatacatatatgtacatatgtatatatatatacatatatgtacatatgtatacatatatatatgtatatatgtatatatatgtatatatacatatatatgtatatatatgtacgtatatatatatatatacatatatacatatatatatatatatacatatatatatatatacatatatatatatatatatatatgttcggccttatgcagatgccaataattttgtcctgggatatcaatgctgagttgcttataaaaaatatttgtaaaaagcttaatattacacacatatatagctagtcttaatttgtttcatataaaagctgataaagctaagatagctatatcgaaattagactttggttagtagttgttaacgaaagtagagagaagctaggggatacattagcatatggtcgatcaattttcagttagcatgcaactgtgctggttttaattaaaagagtaactattcatatgattaattgtaattaatatatatgctggcgcttgtgttatttcaagtgctctagctaagcgaagatcatcgatctgataatggccagaaatgcaagtacatcgtttacccttatttgaagtaaattgtgggatccctagcatgttacgcctaataatgtcttctgttggatatggatgtgttactagctcttacaggcttaggataatattaatatatattgatgttcatagattggtttgatgcatgagtactatatatatatatgcacgtttcctgacgacgacaagacaagagaattattgatatattgagccaagatcgatgtgaatatatactacattggtgatggtagtatcccatatgcatgcatatgcttggtgaatctcaatgtagatatatataagttggtaattaaatgtgtattatattcgatcgtacgtgatcacatgaacgcatgacaaggtattattgatcactagtatagatcggcgaaaagtccaaaaaaactaggactagttaacgcatgtaacaatgcaagtagtcgtctgcttgggagcagctgcatgacctgatcgatgatcagacaaaacaattttggaaagtatatgcaggtgtaattttatttgaaagcagtatcgatcagacaaaagaatcgccgttgattctgggagcgttcgcctacaacgatcgtcttgttcttgtgacgttatgcctatgaaaacacacttgggatattcacatattctggtagtgattattgtatattcctacattttctttagaaaataatagaagtttttatttaactcagctaattatatcaagatgatacaaaaccactaacacacttatgacctctatataactatataactatgatgcacacaaccaaaacacacacacatccaaaagtttacaagaaaaggaagcagatgaagtattacgaaccatcacttctaagattagatcgccacccatatttttgagtaaaagaatttccttggccgcttagtctaagcatagacaccccacaataaccaaattccacgaacccaattttttaagtataactcaattgtgcaactaatggataattaagtaaacaacatacaaaagagaaaaaataattttctgtaaaaaccaatatcatttttgcatgactaaagggacaaaaacagcagtcgttcctaacggaacatatggttgcaaatttttttgaactctccaaagccaacaagtaaacttgtataaaatactatatatgttgtggagtaattcttgatgcgacatatatgatagactagactaagttagcaaaacagcaatcaaagaacatgtgtttaattatctttttgttgtgataaaagcaataattttgattgccttgccaactacgtttacatagattgttgttggttagcacaactccacgacgaaggtagcaaagagaaatcttaaccttatgtggcacctttaatttagactgctgcagcttctctagaggaacagtggaagctgcaagctagtagaagactaatggtattgttggtgctaagcagcagctgccataactagctaaagcgaactatgaactagtgccacgtagtgagttctcacattaaactattcagcggtgtcaaattccatcgaaacttattttgctccgattaattagttgtatatttattttgacgtatacgacacatcatgtttatttaattttgacgtataggatgatacaaagaacaagagaattaacatcatatggattcatgcaagttcgccgcatgcatttttctaagcagtttaattaattttgtcagaaatgaggaataatagtaatttcttttggtaacccagcacaagacgtgggaattgattaaggcgcatgcaggcagggcggagttaataattaatggaggagcacgactacgactccaactcgaacccgccgttgatgagcacgtacaagcacctgttcgtggagcagcaccgcctggacatggacatgggcgccatcgacgtcgacgagtgcgagctccctgtgatcgacctcgcggggctcatggaggcggagcaggtgtgccgcgcagacatggtgcgtgcggcgtcggaatggggcttcttccaggtgaccaaccacggcgtgccgcaggcgctgctgcgcgagctgcacgacgcacaggtggccgtgttccggcggcccttccaggagaaggtgaccgagaggctgctcggcttctcgccggagagctaccggtggggaacgccgacggccaagtgcctggagcagctgtcgtggtcggaggcctatcacatcccaatgacgacgcccaggcccagcacgagcatcagggccagggcggtgatcgaggaggtgtcgagggcgatgtacgagctggcgcagaagctggcagagatcctgatgagagggctgccgggcgccggcgagggcgagacgatggtgacgacgcgggaggagacgtgcttcctgcggctgaaccggtacccaccgtgcgccatggccatggggggcttcgggctgtgcccgcacacggacagcgacttgctcaccatcgtgcaccagcagcaggacaccgtcggcggcctccagctgctcaagggcggcaggtgggtggccgtgaagcccagccccagcaccctcatcgtcaacgtcggcgacctcctgcaggcgtggagcaacgatgtgtacaagagcgtggagcacagggtgatggccaacgccacgctggagcgcttctccatggccttcttcctctgcccctcctaccacacgctcatcatcccaagcagcagccatgtccacgacgacgatgcccattaccggagcttcaccttcggcgagtacaggaagcagatcatggaggacgtcaggagcacaggccgcaagattggactgcaccgctttcgaacccgatagatagatccacctgacctacatacccgccctactcctactatatatatcaaatcaccactgctataatgcattatactcgatccactatgcatttttcatcgccacaatatgcatgtacctagccaataattaattaagctgcactttgcttacttattgctagcttgctactgcatcgatctatatgcatgtacacacatttcattgccttagcagtgtatgtatatgcattattttttccttatttgcccttagcttgcagatttcatagcagctaatatatatccgtcggaattatttgaac</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0103500, RefSeq:Os07g0103500