Os04g0607600

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Revision as of 11:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0607600| Description = Cation transporter family protein| Version = NM_001060345.1 GI:115460419 GeneID:4336927| Length = 5149 bp| Definiti...")
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Gene Name

Os04g0607600

Description

Cation transporter family protein

Version

NM_001060345.1 GI:115460419 GeneID:4336927

Length

5149 bp

Definition

Oryza sativa Japonica Group Os04g0607600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31132702..31137850

Sequence Coding Region

31133384..31133582,31133769..31133990,31136688..31137769

Expression

GEO Profiles:Os04g0607600

Genome Context

<gbrowseImage1> name=NC_008397:31132702..31137850 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31132702..31137850 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccacgtcgcggcgcgcgctcgccggcggcgctttgtccatgcacgtcgcctacttcctcgccatctcctgcctcggctacggcctcctcggggtgctcaaggtgcgggagcccggcgccgcgccgcgccgcatcgaccgcttcttcaccgccgtgtcggccgccacggtgtcgagcatgtccaccgtcgagatggaggtgttctccaacggccagctcgtggtgctcaccgtcctgatgctcctcggcggcgaggtgttcgtctcgctcgtggggctcgcgtccaagtggtccaagctgcggagcgacgccatggacagatcccggcgcgtcgagagccacggcgacgtcgcgctcgccgacatcgacggcggcgacgtcgagaacccgacgtcgtcgggagaggaggcggcgagccgacgccgcccgatggacgcggacacgctgcggcacaatgcggtgcgcgcgctgttctacatcgtgctcgccatcttcgcggtggtgcacgtcgtcggcgccgtggccgtcgcggcgtacgtgctcgcgtcgccgggcgcgaggcggacgctgggggacaagtcgctgaacacgtggacgttcgcggtgttcacgacggtgtcgacgttctccaactgcgggttcatgccgacgaacgagaacatggtggtgttcaagcgggacgcgccgctgcagctgctgctggtgccgcaggtgctggcggggaacacgctgttcgcgccgctgctggcggcgtgcgtgtgggcggcggcggcggcgacgcggcgggaggagctcgtggagatggcgagggaggggggcagggcggcggcggccgggtacgcgcacctgatgccggcgcggcggtgctggatgctggcggcgacggtggcggcgttcgtcgccgtgctgatggcgctggtgtgcggcatggagtggggcggggcgctgcaggggatgagcccgtgggagaaggtggtgaacgcgctgttcctcgccgtgaacgcccggcacaccggcgagtccaccgtcgacctctccatcctcgcgccggccatcctcgtgctcttcgtcctcatgatgtatctacctccgtacacgacgtggttcccatttgaagagaattccactactaaggatagtaatgcagagaaccagggaatcagactgctcgagagtacacttttgtcacaactctcctacctgaccatctttgtcattgccatctgcatcaccgagagaagaaagctcaaagaagaccccctcaacttcagtgtgctaagcattgttgtcgaagttgtcagtgcatatggaaatgtggggttctcaatgggctacagttgcagtagacagatcaatccagaccatctctgcacagataaatggactggtttcgtagggagatggagcgactctggcaaactgatactcatttttgtgatgttctttgggaggctcaagaagttcagcatgaaaggaggcaaagcctggaaacttagttag</cdnaseq>

Protein Sequence

<aaseq>MPTSRRALAGGALSMHVAYFLAISCLGYGLLGVLKVREPGAAPR RIDRFFTAVSAATVSSMSTVEMEVFSNGQLVVLTVLMLLGGEVFVSLVGLASKWSKLR SDAMDRSRRVESHGDVALADIDGGDVENPTSSGEEAASRRRPMDADTLRHNAVRALFY IVLAIFAVVHVVGAVAVAAYVLASPGARRTLGDKSLNTWTFAVFTTVSTFSNCGFMPT NENMVVFKRDAPLQLLLVPQVLAGNTLFAPLLAACVWAAAAATRREELVEMAREGGRA AAAGYAHLMPARRCWMLAATVAAFVAVLMALVCGMEWGGALQGMSPWEKVVNALFLAV NARHTGESTVDLSILAPAILVLFVLMMYLPPYTTWFPFEENSTTKDSNAENQGIRLLE STLLSQLSYLTIFVIAICITERRKLKEDPLNFSVLSIVVEVVSAYGNVGFSMGYSCSR QINPDHLCTDKWTGFVGRWSDSGKLILIFVMFFGRLKKFSMKGGKAWKLS</aaseq>

Gene Sequence

<dnaseqindica>4269..4467#3861..4082#82..1163#gctcatccacaagctcgccgagccagccgttgcaccggccgcgccggagcgagcacacggcggccgcgtgcgtgctccaatatgcccacgtcgcggcgcgcgctcgccggcggcgctttgtccatgcacgtcgcctacttcctcgccatctcctgcctcggctacggcctcctcggggtgctcaaggtgcgggagcccggcgccgcgccgcgccgcatcgaccgcttcttcaccgccgtgtcggccgccacggtgtcgagcatgtccaccgtcgagatggaggtgttctccaacggccagctcgtggtgctcaccgtcctgatgctcctcggcggcgaggtgttcgtctcgctcgtggggctcgcgtccaagtggtccaagctgcggagcgacgccatggacagatcccggcgcgtcgagagccacggcgacgtcgcgctcgccgacatcgacggcggcgacgtcgagaacccgacgtcgtcgggagaggaggcggcgagccgacgccgcccgatggacgcggacacgctgcggcacaatgcggtgcgcgcgctgttctacatcgtgctcgccatcttcgcggtggtgcacgtcgtcggcgccgtggccgtcgcggcgtacgtgctcgcgtcgccgggcgcgaggcggacgctgggggacaagtcgctgaacacgtggacgttcgcggtgttcacgacggtgtcgacgttctccaactgcgggttcatgccgacgaacgagaacatggtggtgttcaagcgggacgcgccgctgcagctgctgctggtgccgcaggtgctggcggggaacacgctgttcgcgccgctgctggcggcgtgcgtgtgggcggcggcggcggcgacgcggcgggaggagctcgtggagatggcgagggaggggggcagggcggcggcggccgggtacgcgcacctgatgccggcgcggcggtgctggatgctggcggcgacggtggcggcgttcgtcgccgtgctgatggcgctggtgtgcggcatggagtggggcggggcgctgcaggggatgagcccgtgggagaaggtggtgaacgcgctgttcctcgccgtgaacgcccggcacaccggcgagtccaccgtcgacctctccatcctcgcgccggccatcctcgtgctcttcgtcctcatgatgtgagtgctctctgtttctctctctgacctaagctctctcagggtctcagctcttcaacctagctagtactccatctgtctcataagttttcgcttttactatttgaccacttgtcttattcaaaaaattttgtaattatttttttttgacttactttattatctaaagtattttaagcataacttttcgttttttatatttgcacaaatttttttgaataaaacgagtggtcaaacagtgcaagcaaaaactcaaaatcccttatattataggacggaggaagtacttgtttccaagcttcctgcattgtacactataatattctagaaccatagtcttttattactactatcctagcccaaaaatataataacatagaattagactaaatacattttaatactacgaatctggataaagtagtatagatttgtactacttaaatatgtcctgtcctttctatgctgttatattgtggacaaagggagtagctagtaggtacgcaaaccatttacatcatcacattaaaatgggaactagttttaccatgcatgttaactttactctccggacctctagaacatatgttttccttttcattagttctcctaccaattttgacattgttagtagcatgttttgcgattaaatcacaaactataaatacatagaaatgtttcgttgcaacatgcatatatgtggaggtgagccatgcatgcgacccataacaatgacacaatgccaatacctttgtcccaaagtgtattaggttgtgttcgttaccggtggttgaaagcaaatttctcatacatgaaaaatggaacggtctaatagcacttggttaattcggtattagctttaaaaacttaaaaattagattaattaatatgctcttttaaagtatttttttataaaaaccatactatttaacaatttaagaaacgtgcgtgcgaaaaacgtaagagtgttgcaaagaacgcaaccttattgcattgccgagtgtagtggcacttggcatcgatgtccttgagtgtaaaatgtcaggatctctcaggtggaaactgcaaaaccacttgaattattgagtaaaatatcggatggtcatatcataatgacaaattaaattacaagtactaatagtgaacgagtgatgataggagatgtaacggccggtggcaagtgggttctcttctgcaatggaatcttcttcggttcttcccttctccgtacgtaatagtcacggacaaaagcacatcaaaacactataaactcgtcaataattcttcgtatcctaattaatttgctcatcggccacagcaagaggacacatgtttcttttctgtggtaggacagtcccaacccataacactagacatggtttccataaactctacatcatcaagaagtactagacactactcttccaatgcaaacaccactatttcatacttcaatttaatgctacttatctcacatgatgtcttggatgttgtgtagaaaccatgtctctctttcctcatttattcacttgcatattattttttgtcctaagtagcaacttatttaatgctatggacatcatcctaattattgggttgagaatggccttaggtaggtagatgcatgtgatggagagtagtttcaaacgtcaaaacactgtcccatttcccagttcgtgaccataggtaggagttgaccgtgcgttgaccctttctcctagatttttgacagatttttttttatttttgccaaagaagaaaaggatagctctcctcctagcttcacagaaaccacaacgcagcacaccacttcaacttgcaagaacaccacaatcaatttgctgaaaggtaggagtattaatattccaagtctccattcaaaagcctgcatgcatcacatgccacaccttctgtcaacctgagaatatgctctccgcgttctcagcaaatctggtcacctgggaggttgatgactattacttctaattttgttcatgtcaaaatgggaggcgcatagttgctagaatttgttccaatctttggttcttccagatgattatggctcaattttcacatgcaattccataaaattcgccatctttccccagttgatgcatggagtacaaaatagtggagcacagtagtcgtcattcgtcaacttttgcagcctggtttaggaactgggatgtgtgcctctgaaaatgacctgcatggctaaagcagggtgatatctcctgccgattgtcgtagcgcgtgcaaaggaatttcttcaccggccagcagttgttcccatattgttctctcaaggccatatgcttgtgaatccaagcttccagtcagttgagccattgttttcatcttattgtcgcatcatttacagagaatataaccaagcaccagaatgttcttgcacgtcacctgaaagatcaaaccttagacaagcagagctgcaactccttccctgaattatttctcaataatgatctgcttttgaacatccgaagatgataatccacccaagggtgactttctgatcgcatttcgttaagcagctgcatcgacatgcatgcattttcaatgcccaaaataagcaactaatcactgaaactttaattggaaagattgctgcaaattaactgatgtctgtttaaactcgtaccgtttgttgtctcatattctgcttcatcttgcctccaggtatctacctccgtacacgacgtggttcccatttgaagagaattccactactaaggatagtaatgcagagaaccagggaatcagactgctcgagagtacacttttgtcacaactctcctacctgaccatctttgtcattgccatctgcatcaccgagagaagaaagctcaaagaagaccccctcaacttcagtgtgctaagcattgttgtcgaagttgtcaggcaagtcagactaaatggtttcttacctgagaaaaaaaatgcagaccaagtaaattaacaatttatctgatgaaaacagcaaaacacaaagtaacacttgtcaggtatttctgaatcttaataatacacaatgaaaatagtaatgttttctttcgtggaatctgacggatctgcccacatttgcagtgcatatggaaatgtggggttctcaatgggctacagttgcagtagacagatcaatccagaccatctctgcacagataaatggactggtttcgtagggagatggagcgactctggcaaactgatactcatttttgtgatgttctttgggaggctcaagaagttcagcatgaaaggaggcaaagcctggaaacttagttagatcttagatgcagtaccagctgaacattgcaggtccctgagggtaggaaaaaagtataaagatgtactctttctcttccgtttgtttgtatattcattttcacatagacaggaaccttccactgtcatccttgcacaaagctcaccctccactccaagtgttggcagtttcagatcaggtgaatgaaagttcatcacaagaaatcaacataggctaattaacctgattcacttcacatagagatgcttctgtcactggctccctgcaatgaccatttattgcatccatgtaatgctagtaaaaggccggatgtcattgtgatggctgcaatacttaaatacccacatgttaaaagatatgtagatgtctatcaagtggtgatcagttcatacagtacgtccagaagtactttcttctgaagcaagggcatctagaagaacctgagagctgagatcacaaagattgaaaaaacactagattgcttatcctagtcactacacttttctgatagaaattaaaaaggacacacgtgcaaccaagggtgcatcagtgaaaaaaagagagaataaaagggaaaagggaaagaaaatctccactacacattgtgcattctggtacacttgttcccactacagaagatgttgattatatagcaataaagcaaacaatctagtatttgtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0607600, RefSeq:Os04g0607600