Os05g0277000

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Annotated Information

Function

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence

By similarity.

Subcellular location: Secreted › cell wall

By similarity. Membrane; Peripheral membrane protein

By similarity.

Sequence similarities: Belongs to the expansin family. Expansin A subfamily.Contains 1 expansin-like CBD domain.Contains 1 expansin-like EG45 domain.

Expression

Protein name: Os05g0277000 protein

Protein sequence: 2HCZ_X 148 IVFHIEKG.[2].PNYLAVLVKYVADDGDIVLMEIQ.[2].L S A.[1].WKPMKLSWGAIWRMD.[1]. 202 query 156 IRFTISGR DYFELVTVFNVGGSGVVAQVSIK.[2].K T D WMAMSRNWGQNWQSN 206 gi 20138021 157 VRFTMRGQ GNFNMVMISNVGGGGSVRSVAVR G S.[2].K.[1].WLQMTRNWGANWQSS 208 gi 20138096 162 MRFTINGR NYFELVLISNVAGGGEISKVWIK G S.[2].N.[1].WETMSRNWGANYQSN 213 gi 75244809 158 IRFTINGK NYFELVLIANVGGSGVVSGAWIK G S.[2].Q WMAMSRNWGMNWQSN 208 gi 75223466 157 MRFTINGN DYFELVTVANVGGSGVVSQMWIK G F.[2].D WMVMSRNWGASWQSN 207 gi 75263195 162 VKFAINGH NYFELVNVFNVGGSGVVTGLWIK G S.[2].D WLVMSRNWGANWQSN 212 gi 75267715 164 VRFTINGR NYFELLMISNVGGAGSVQSVQIK G S.[2].N WMTMSRNWGANWQSN 214 gi 115450129 220 VTFHVEQG.[2].PVYMAILVEYENGDGDVVQVDLM.[2].R.[10].T G.[1].WTPMRESWGSIWRLD 283 gi 125551519 160 LTFAVDAG.[2].PSYFAVLVKYENGDGDLSGMDLM.[2].G A G.[2].WTPMQQSWGAVWKLS 214

2HCZ_X 203 A KALKGPFSIRLTS.[3].KKVIAKDVIP 229 query 207 A YLNTQSLSFKVKL.[3].REVTVWNIAP 233 gi 20138021 209 G DLRGQRLSFKVTL.[3].KTQTFLNVVP 235 gi 20138096 214 T YLNGQSLSFKVQL.[3].SIKAALNVVP 240 gi 75244809 209 A YLTGQSLSFRVQT.[3].KVKTAYDVAP 235 gi 75223466 208 A YLNSQSISFRVQT.[3].RVITADNVAP 234 gi 75263195 213 A YLNGQGLSFRVQL.[3].RQVTATNVAP 239 gi 75267715 215 A YLNGQPLSFKVTT.[3].VTKTFLNAIS 241 gi 115450129 284 T.[1].HPLQGPFSLRITN.[3].KTLIADQVIP 311 gi 125551519 215 A.[1].AALQAPLSIRLTS.[3].KTLVASNVIP 242

   NM_001061613.1 → NP_001055078.1  Os05g0277000 [Oryza sativa Japonica Group]

   See proteins identical to NP_001055078.1

   Status: PROVISIONAL

   UniProtKB/Swiss-Prot
       P0C1Y4 
   UniProtKB/TrEMBL
       Q0DJI1 
   Conserved Domains (3) summary

       smart00837
       Location:59 → 145
       Blast Score: 403
           DPBB_1; Rare lipoprotein A (RlpA)-like double-psi beta-barrel

       PLN00193
       Location:8 → 248
       Blast Score: 883
           PLN00193; expansin-A; Provisional

       pfam01357
       Location:156 → 233
       Blast Score: 256
           Pollen_allerg_1; Pollen allergen

This family contains allergens lol PI, PII and PIII from Lolium perenne.

Evolution

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3D Gene Structure

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Labs working on this gene

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References

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Structured Information

Gene Name	Os05g0277000
Description	Similar to Expansin Os-EXPA3
Version	NM_001061613.1 GI:115462956 GeneID:4338279
Length	1006 bp
Definition	Oryza sativa Japonica Group Os05g0277000, complete gene.
Source	Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome	Chromosome 5
Location	Chromosome 5:11429537..11430542
Sequence Coding Region	11429537..11429843,11429990..11430308,11430422..11430542
Expression	GEO Profiles:Os05g0277000
Genome Context	<gbrowseImage1> name=NC_008398:11429537..11430542 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>
Gene Structure	<gbrowseImage2> name=NC_008398:11429537..11430542 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>
Coding Sequence	<cdnaseq>atggcaatgccagtagtacaagtgcttcttctttgcgcattagcttatcaagcagtcgacgcccagtggacaccagccacggcaacgttctacggcggcagcgatggcgctggtaccatgggaggcgcgtgtggatacggcaacctgtacaacgccgggtacgggctgaacaacgcggcgctgagctcggcgctgttcaacgacggcgccatgtgcggcgcgtgctacaccatcgcctgcgacaccagccagtccacgtggtgcaagcccggcacgtccatcaccatcacggccaccaacctgtgcccgcccaactacgcaaaaaaaagcgacgccggcgggtggtgcaacccgcctcgcaagcacttcgacatgtcgcagccggcctggacctccatcgccatctaccaagccggcatcgtccccgtcaattttaagagggtaccgtgccagaagagcgggggcatcaggttcaccataagcgggagggactacttcgagctggtgacggtgttcaacgtgggaggcagcggcgtggtggcgcaggtgtcgatcaaggggtccaagacggactggatggcgatgagcaggaactggggccaaaactggcagagcaacgcctacctcaacacccagagcctgtcgttcaaggtgaagctcgacgacgcccgcgaggtcacggtgtggaacatcgcgccctccaactggaacttcggcaccacctacacgtccaacatcaacttctag</cdnaseq>
Protein Sequence	<aaseq>MAMPVVQVLLLCALAYQAVDAQWTPATATFYGGSDGAGTMGGAC GYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLC PPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTI SGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKV KLDDAREVTVWNIAPSNWNFGTTYTSNINF</aaseq>
Gene Sequence	<dnaseqindica>700..1006#235..553#1..121#atggcaatgccagtagtacaagtgcttcttctttgcgcattagcttatcaagcagtcgacgcccagtggacaccagccacggcaacgttctacggcggcagcgatggcgctggtaccatgggtacgttcgtttatcttcctccatttctgcaaaacgttttctttttttttttcctttctggagaaatgtgcatgcatattgatgatgttgattgtgcgtgcatatgcatgcaggaggcgcgtgtggatacggcaacctgtacaacgccgggtacgggctgaacaacgcggcgctgagctcggcgctgttcaacgacggcgccatgtgcggcgcgtgctacaccatcgcctgcgacaccagccagtccacgtggtgcaagcccggcacgtccatcaccatcacggccaccaacctgtgcccgcccaactacgcaaaaaaaagcgacgccggcgggtggtgcaacccgcctcgcaagcacttcgacatgtcgcagccggcctggacctccatcgccatctaccaagccggcatcgtccccgtcaattttaagaggtatacgcgaaatcgcaaaacacaagtcactactacagaaaccggccccttcatatatgatatatatcgatcggttcgttgtgtcaggttttaaaccggcagtgacatgaacatgtgcttatgagcggctgtgtgtgcatttttagggtaccgtgccagaagagcgggggcatcaggttcaccataagcgggagggactacttcgagctggtgacggtgttcaacgtgggaggcagcggcgtggtggcgcaggtgtcgatcaaggggtccaagacggactggatggcgatgagcaggaactggggccaaaactggcagagcaacgcctacctcaacacccagagcctgtcgttcaaggtgaagctcgacgacgcccgcgaggtcacggtgtggaacatcgcgccctccaactggaacttcggcaccacctacacgtccaacatcaacttctag</dnaseqindica>
External Link(s)	NCBI Gene:Os05g0277000, RefSeq:Os05g0277000