Os03g0300000

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Revision as of 12:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0300000| Description = Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)| Version = NM_001056388.1 GI:115452504 GeneID:433256...")
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Gene Name

Os03g0300000

Description

Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)

Version

NM_001056388.1 GI:115452504 GeneID:4332564

Length

1244 bp

Definition

Oryza sativa Japonica Group Os03g0300000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10598134..10599377

Sequence Coding Region

10598331..10599377

Expression

GEO Profiles:Os03g0300000

Genome Context

<gbrowseImage1> name=NC_008396:10598134..10599377 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10598134..10599377 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>acgctccgggacccgccctacacgctgggccccaagatctccgactgggacgagcagcgggccgcgtggcaccgccgccacccggagacgccgcccttcgtcaacgacgtcaagccgcgggtgctgctcgtcacgggctcctcgcccaagccgtgcgagaaccccgtcggcgaccactacctcctcaagtccatcaagaacaagatggactactgccgcgtccacggcctcgagatcttctacaacatggcgctgctcgacgccgagatggccggattctgggccaagctcccgctcctccgcgcgctgctcctcgcgcacccggagatcgagttcctctggtggatggactccgacgccatgttctccgacatggcattcgagctgccatgggagcggtacggcccctacaacctcatcatgcacggctgggatgagatggtctacgacgacaagaactggattggcctcaacacaggcagcttcttgctgcgcaactgccaatggtcgcttgatttccttgatacatgggcaccaatgggaccaaagggccctgtccgtattgaggccgggaaggttttgaccaagtacttgaaggatcggccggtgtttgaggctgatgatcagtcggccatggtatacatccttgctacagagcgtgagaaatggggtgacaaggtgtaccttgagaatgggtattacctccatggatattggggtatcttggttgataggtatgaggaaatgcttgagaattaccatccaggacttggtgatcaccggtggccactggtcactcactttgtcggatgcaagccgtgtgggaagtttggggattaccctgtggagaggtgcctcaagcagatggagcgtgctttcaattttggggataatcagatcttgcaaatgtatgggtttacacacaagtcgcttggcagcaggaaggtgaagaggatcaggaatgagactagcaacccacttgatgtcaaggatgaactagggttgctccacccagcattcaaggccatgaagactacttctacgtga</cdnaseq>

Protein Sequence

<aaseq>TLRDPPYTLGPKISDWDEQRAAWHRRHPETPPFVNDVKPRVLLV TGSSPKPCENPVGDHYLLKSIKNKMDYCRVHGLEIFYNMALLDAEMAGFWAKLPLLRA LLLAHPEIEFLWWMDSDAMFSDMAFELPWERYGPYNLIMHGWDEMVYDDKNWIGLNTG SFLLRNCQWSLDFLDTWAPMGPKGPVRIEAGKVLTKYLKDRPVFEADDQSAMVYILAT EREKWGDKVYLENGYYLHGYWGILVDRYEEMLENYHPGLGDHRWPLVTHFVGCKPCGK FGDYPVERCLKQMERAFNFGDNQILQMYGFTHKSLGSRKVKRIRNETSNPLDVKDELG LLHPAFKAMKTTST</aaseq>

Gene Sequence

<dnaseqindica>1..1047#acgctccgggacccgccctacacgctgggccccaagatctccgactgggacgagcagcgggccgcgtggcaccgccgccacccggagacgccgcccttcgtcaacgacgtcaagccgcgggtgctgctcgtcacgggctcctcgcccaagccgtgcgagaaccccgtcggcgaccactacctcctcaagtccatcaagaacaagatggactactgccgcgtccacggcctcgagatcttctacaacatggcgctgctcgacgccgagatggccggattctgggccaagctcccgctcctccgcgcgctgctcctcgcgcacccggagatcgagttcctctggtggatggactccgacgccatgttctccgacatggcattcgagctgccatgggagcggtacggcccctacaacctcatcatgcacggctgggatgagatggtctacgacgacaagaactggattggcctcaacacaggcagcttcttgctgcgcaactgccaatggtcgcttgatttccttgatacatgggcaccaatgggaccaaagggccctgtccgtattgaggccgggaaggttttgaccaagtacttgaaggatcggccggtgtttgaggctgatgatcagtcggccatggtatacatccttgctacagagcgtgagaaatggggtgacaaggtgtaccttgagaatgggtattacctccatggatattggggtatcttggttgataggtatgaggaaatgcttgagaattaccatccaggacttggtgatcaccggtggccactggtcactcactttgtcggatgcaagccgtgtgggaagtttggggattaccctgtggagaggtgcctcaagcagatggagcgtgctttcaattttggggataatcagatcttgcaaatgtatgggtttacacacaagtcgcttggcagcaggaaggtgaagaggatcaggaatgagactagcaacccacttgatgtcaaggatgaactagggttgctccacccagcattcaaggccatgaagactacttctacgtgataagtgataattagagtacaatgccacgcgttatttcgttcattgtagatccttttgggtctaaaatcttaaaaaggtgttctttttgtagacttgggttgacaagggagtttgggttgggatcaaacatcaaaggatggatatctatgttgtaatgtgaaattttaggagaacaatggtatgtttattgctggcat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0300000, RefSeq:Os03g0300000