Os10g0392600

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Revision as of 08:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0392600| Description = SPX, N-terminal domain containing protein| Version = NM_001071050.1 GI:115481843 GeneID:4348535| Length = 2231 bp| ...")
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Gene Name

Os10g0392600

Description

SPX, N-terminal domain containing protein

Version

NM_001071050.1 GI:115481843 GeneID:4348535

Length

2231 bp

Definition

Oryza sativa Japonica Group Os10g0392600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:13446247..13448477

Sequence Coding Region

13446344..13446580,13446671..13446821,13447891..13448336

Expression

GEO Profiles:Os10g0392600

Genome Context

<gbrowseImage1> name=NC_008403:13446247..13448477 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:13446247..13448477 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagtttgggaagaggctgaagaagcaggtggaggagagcctcccggagtggagggacaagttcttggcgtacaagcgcctcaagaagctcgtcaggctcgtctcctcctcctccggcgatgtcggcggcggcggcggcggcgaggccgaattcgtgcggctgctcgacggcgaggtcgacaggatcaacgccttcttcctcgagcaggaggaggagttcgtcatacggcagagggagctgcaggagacagtggagaaggtggccggcggcggcggtggagggcggcggccggcggcggcggagatgaggagggtgaggaaggagatcgtggacctgcacggggagatggtgctgctgcttaactacagcgccgtcaactacacagggctggccaagatcctgaagaaatacgacaagcgcaccggccgcctcctccggctgccgttcatcgagaaggtgctccggcagccgttcttcacgacggagctcatctcgaggctcgtccgcgactgcgaggccaccatggaggccatcttcacctcctccgtggcgacgacggcgatggccggcgatcgccggacatggaaaggatgctccggcgacgccgggatggctccgatggcagaccagcagggcatcttccggaacaccgtcgccgcgctggcgacgatgaaggagctccggagcgggagctcgacgtacgggcggttctcgctgccgccgatggcggcgccggcctcgccggagtccgacgtgctgcagtccatccgatccgatccccatctgaaagagaatggaagaattccaagtttacagtttttttatgcctaa</cdnaseq>

Protein Sequence

<aaseq>MKFGKRLKKQVEESLPEWRDKFLAYKRLKKLVRLVSSSSGDVGG GGGGEAEFVRLLDGEVDRINAFFLEQEEEFVIRQRELQETVEKVAGGGGGGRRPAAAE MRRVRKEIVDLHGEMVLLLNYSAVNYTGLAKILKKYDKRTGRLLRLPFIEKVLRQPFF TTELISRLVRDCEATMEAIFTSSVATTAMAGDRRTWKGCSGDAGMAPMADQQGIFRNT VAALATMKELRSGSSTYGRFSLPPMAAPASPESDVLQSIRSDPHLKENGRIPSLQFFY A</aaseq>

Gene Sequence

<dnaseqindica>98..334#425..575#1645..2090#gtggatcataccttctttttttatggaagttgtagataatagctagctaattacatgtaaattagggatttgttcttgattaatcagtttggggaggatgaagtttgggaagaggctgaagaagcaggtggaggagagcctcccggagtggagggacaagttcttggcgtacaagcgcctcaagaagctcgtcaggctcgtctcctcctcctccggcgatgtcggcggcggcggcggcggcgaggccgaattcgtgcggctgctcgacggcgaggtcgacaggatcaacgccttcttcctcgagcaggaggaggagttcgtcatacggcagagggtctctgcattagctatttctgcagcaaagatttttggttttgggaagttgagatgatgattgtgagcctgcgtgcattgttcgtcgcaggagctgcaggagacagtggagaaggtggccggcggcggcggtggagggcggcggccggcggcggcggagatgaggagggtgaggaaggagatcgtggacctgcacggggagatggtgctgctgcttaactacagcgccgtcaactacacaggtttgagtttggtttcaaatttcaaattcaaacttaggaggtgaaaactttcagaattttcgtatacgacccgtgacaaggttcgtacggagtaattacgaactggtattcccaaagagatctcaattcccaaatttcaaatatttcgatgggcccgggtagagcaccataccagggggaatagttttttctttttaaaatcttttttttttggcgcaaacaggtgagcatcatttgtagtagctgtgtgcttaacaacttctgatacaacagtactcctccgtcctaaaataaatgcagttttgcactattcacattcaacgtttgaccgttcgtcttatttaaaccttttttatgattagtatttttattactattagatgataaaacataaatagtactttacgtgtgactaaatattttcaaattttttacaaattttttaaataagacggacggtcaaacattgggcacggatatccacggctacacttattttaggacggatgtagcactaacagtgattttttgacttgaaaattttcttatgatttgatcactgttcaacttgagacttgtcgtagccgtccccatgtgagtcaacagtatcttcaggctgcacattacagccaaaattttctctacacaacaaaattcattcagtgcatttgcacagaacagtaactgcaacctaaagacaatctgtttatccatatagattatagttagacacgatgatgatctgtttatccacaaatattatagactaatcgtcttccctatcgatcggtaagtgactaggctgtgttccttactgggttggaacccactttctccgcgcgaaaaacggaacagtttattagcacattattaattaagtattagcttttttaaaaaataaattaatttgatttttttaaaacaactttcgtataaaaacttctaaaaaaatcacaccgtttagcagcgccgataacaaaggataagggttgggaccatgctgaaacgaacgcagccagagaggctgaacatggtgatgaattattgatgatgatctgtgaaattgcagggctggccaagatcctgaagaaatacgacaagcgcaccggccgcctcctccggctgccgttcatcgagaaggtgctccggcagccgttcttcacgacggagctcatctcgaggctcgtccgcgactgcgaggccaccatggaggccatcttcacctcctccgtggcgacgacggcgatggccggcgatcgccggacatggaaaggatgctccggcgacgccgggatggctccgatggcagaccagcagggcatcttccggaacaccgtcgccgcgctggcgacgatgaaggagctccggagcgggagctcgacgtacgggcggttctcgctgccgccgatggcggcgccggcctcgccggagtccgacgtgctgcagtccatccgatccgatccccatctgaaagagaatggaagaattccaagtttacagtttttttatgcctaattgccggtactagattgtatgattacgaaacgagtcattgagagattagcaatgtgcaagctaaagttttctgtacttgtaaactcacatatgccgtggtagagaacatacatacacatatataaggaaaattctttagct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0392600, RefSeq:Os10g0392600