Os02g0724000

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Revision as of 02:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0724000| Description = Zinc finger, B-box domain containing protein| Version = NM_001054510.1 GI:115448390 GeneID:4330574| Length = 4797 bp...")
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Gene Name

Os02g0724000

Description

Zinc finger, B-box domain containing protein

Version

NM_001054510.1 GI:115448390 GeneID:4330574

Length

4797 bp

Definition

Oryza sativa Japonica Group Os02g0724000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30981208..30986004

Sequence Coding Region

30983167..30983754,30984251..30984451,30984722..30985026,30985312..30985441

Expression

GEO Profiles:Os02g0724000

Genome Context

<gbrowseImage1> name=NC_008395:30981208..30986004 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30981208..30986004 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgctctttgtgatttctgcagggagcaaaggtcaatggtctattgccgatcagatgcagcatccttgtgcttgtcgtgtgatcgtaatgtgcattcagccaatgccctttcccgacgccatacaagaacccttctttgtgatcgttgtgttggacagcctgcagcagtccgttgtcttgaagagaacacctcactttgccaaaactgtgactggaatggacatggggcagcatcctcagctgctgggcataaaaggcagaccataaactgttactcggggtgcccatcgtcggcagagctctcgagaatctggtcctttagtatggatatcccaactgtagctgcggagccaaactgtgaggaaggaataaacatgatgagcattaatgacaatgacgtcaataaccattgtggtgctccagaagatggccgcttgttggatatagctagcacagcactcatgagtgatttacctacaggagacaagttcaaacctttaataggttcttcttcaggagatgggatgaatcttctgccacttaattcagatcagccagctgagccagtttcaacgacgcctaaggcaccctgtgtcacagacaaagatatgttcaatgatgggagcgtatatggagacttctgtgtggatgatgctgacctaacatttgagaattatgaagaattattcggtacctctcacgttcaaacagaacaactctttgatgatgctggaattgacagttattttgaaatgaaggatgtgccagcagatgaatctaatgagcagcccaaacctgtgcagccagaatgtagcaatgtcgcatctgttgattctgggatgtcaaacccagctgcaagggctgattccagccattgtattcctggtaggcaggctatatccaacatatccctttccttctctggtttgactggtgaaagcagtgctggatattttcaagattgtggggtatcgtcaatgatccttatgggtgagccaccctggcatcctcctggtcctgaaagttcatctgctggaggcagcagagataatgctcttacacggtacaaggagaagaagaagagaagaaaatttgacaagaagataaggtatgcttctcgtaaggctagggcagatgtgagaaaaagggtcaaaggacggtttgtaaaggctggcgaagcatatgactacgatccgctgagccaaacaagaagctactaa</cdnaseq>

Protein Sequence

<aaseq>MDALCDFCREQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTR TLLCDRCVGQPAAVRCLEENTSLCQNCDWNGHGAASSAAGHKRQTINCYSGCPSSAEL SRIWSFSMDIPTVAAEPNCEEGINMMSINDNDVNNHCGAPEDGRLLDIASTALMSDLP TGDKFKPLIGSSSGDGMNLLPLNSDQPAEPVSTTPKAPCVTDKDMFNDGSVYGDFCVD DADLTFENYEELFGTSHVQTEQLFDDAGIDSYFEMKDVPADESNEQPKPVQPECSNVA SVDSGMSNPAARADSSHCIPGRQAISNISLSFSGLTGESSAGYFQDCGVSSMILMGEP PWHPPGPESSSAGGSRDNALTRYKEKKKRRKFDKKIRYASRKARADVRKRVKGRFVKA GEAYDYDPLSQTRSY</aaseq>

Gene Sequence

<dnaseqindica>1960..2547#3044..3244#3515..3819#4105..4234#cgctcgctctccctttcgcgcaccagaaaagtcgttttttaattttcgagtttccgtggaagattctcgatacctgtccctcgtcgtcgtcctcctccgccggccgccgccgacgaccgcagcaggggtggatccggggcggcgccgattcggtgagtccggtctcgcgagctcgagctgtttgtttgtttgtttgtttggtggggattggattgggttggatttgcgttgtgtaggctagccgcatcagcgccgcttgtttggtggatttcgtgagctgctgctggattagggggctgggattgggattgggaggggggatggatcatggatgtcggtggattgggggggattgggtttgagtgttcgatttcgagtccgcttgatcgtttctgtggtgttccagggtgtttggtgttggggagtctgaactgattttttggttttctttctttttgcggacacttcacgctttctctcgtgttgcgtggagcgtacgtgagtggtttttggtccggctttagctttgagctggactttagctgctcagaatttgattatttttctttctctaattggagtacatacaagtacgatggcttagcatgtttcagtatccagttcagttttcaactagaaaatattaacaatttcatcccctctgcccttttgtctactgacataatagtcgtgtagcggcaactgcggttagatgcagaaaggaagcccttttgtattcttaaatttggataatcttaaaaaacaaaataacatttctcttgcttatttgagtggctcagaaagtttgttgcttttatccacacacggcatgctttatatgatcagagaagtggggttagtgctatttaaaacttaggattagtcccgataaaattgtttgtattgtggagatgcatgcttgttgatttacatgattagtgctcagaaaaggtgcccttttgatatgcaaaataggacataccagcgtcaaaaataaagggacataataaaatgagcaaccaggatcattgttggatgcacagctggtgaagtcctatttgtattgccgcttctagctcttgcccatgcatgctaataagccatcccatgctggtacgaaaagtgacttttattaactcagaaatgctatcaactgcagctagcatttgtttgctgcatagctccatgttgctaatttcatgtttttccattgttatcagatgcattgtactgctctctgctagacttgtctagtgaattggtgttattgacccttattttttaaacatggatacttttttcccccttatatgctttacagagaacatgcgcttacaggttacagactgacagtacataggatagaagataaaaccgtaacatttaccaagaaaaacttcctgcaagtagttttgtgcccttctatttcagagacttttgagttctttatgcccttgctagcaaatcttgggtgggataataaaactcaaaactcttcacaaattgttatacgctacctatattttaaattgttactaagtcaatgaatatattgattgctcttgttgtgatacatttgaaatgtttctgttggttgcagagcaattcaagtggttcatttcatggcctgtatcaatatacttatatatctccaacacttaccaaggaatggaaacaaactcatcatgtaacatgggctgcaaaatctgtcccttcttttctaatttgaagtgtgcacatatttgctatattttccattaaaaaaatatactactctctttccataatgttcaattataagtttgttgttttgttgttactgatttttgtttttggctttttgcacaccagtatcctggtaggatcccactgaattcaactgttgaacaaaaagccaggaaggtggctgttcttgtggcactcagtgctagtggaagtgctccagtactgtacaggaccatggatgctctttgtgatttctgcagggagcaaaggtcaatggtctattgccgatcagatgcagcatccttgtgcttgtcgtgtgatcgtaatgtgcattcagccaatgccctttcccgacgccatacaagaacccttctttgtgatcgttgtgttggacagcctgcagcagtccgttgtcttgaagagaacacctcactttgccaaaactgtgactggaatggacatggggcagcatcctcagctgctgggcataaaaggcagaccataaactgttactcggggtgcccatcgtcggcagagctctcgagaatctggtcctttagtatggatatcccaactgtagctgcggagccaaactgtgaggaaggaataaacatgatgagcattaatgacaatgacgtcaataaccattgtggtgctccagaagatggccgcttgttggatatagctagcacagcactcatgagtgatttacctacaggagacaagttcaaacctttaataggttcttcttcaggagatgggatgaatcttctgccacttaattcagatcagccagctgagccagtttcaacgacgcctaaggtgcatgcttctcattcccctccaaaacctattcaagtattctgctaagtttctgcataggtcataacatattgcatggacatattattacaccaaatgttcacactgcgtggttgcggtttcgaccatgtactttgttttggtattcttctagaagtgaacgttcgaagggaaaactttctgtagtttgaccaatggtacaatgaccatcttttggtcattatttattactgtttgctactttcttaagagttccacactgtcaaagctttcctggtgtttttctcctgccgagcaagttactcttatcttctaataattttaccattgaatgtgaattcacctagatcttataattccctaatgatgatggttgaacaattgctgcagttggaatttgtgtatttccaatatcattattcatgaaaatgtcatctgcgatgcctgtcattatggtgtcactgcgtgcttatcgaaacttggttgcataattcaggcaccctgtgtcacagacaaagatatgttcaatgatgggagcgtatatggagacttctgtgtggatgatgctgacctaacatttgagaattatgaagaattattcggtacctctcacgttcaaacagaacaactctttgatgatgctggaattgacagttattttgaaatgaaggatgtgccagcagatgaatctaatgaggtccgtacctttctgcatatagtctttttatctgctgtgtttgttgtaggaaaagagctctgttttgctatttctgaccttcccgccataatcagggttaatctcgttttcctccatttgtgcttatatcgagttgaccctaccattttactgagaatcattaaatgattgattgggttaattaggagtggaatgtctgcatatctcatcgtccattttatggctattaattattttactaaaattttggtatgactgttatactttcagcagcccaaacctgtgcagccagaatgtagcaatgtcgcatctgttgattctgggatgtcaaacccagctgcaagggctgattccagccattgtattcctggtaggcaggctatatccaacatatccctttccttctctggtttgactggtgaaagcagtgctggatattttcaagattgtggggtatcgtcaatgatccttatgggtgagccaccctggcatcctcctggtcctgaaagttcatctgctggaggcagcagagataatgctcttacacggtacaaggagaagaagaagagaagaaagtaagtgcatcttactgtgctttttcagttttttgaaagtaagttcatactagtacttgatatgccatggttaaatgcattacagctaagaatgtggctgcagtatcattcaattttcagatttggaattctatattaaaaagcttactgtgccaaatcgatattttcgtatacacgtgatcattttagacatgtggatgcttgctcctagtgtgaatgctactttatgtttttcttaaaagaagttattatatggcctttcttcacatattttcttcttaacagatttgacaagaagataaggtatgcttctcgtaaggctagggcagatgtgagaaaaagggtcaaaggacggtttgtaaaggctggcgaagcatatgactacgatccgctgagccaaacaagaagctactaaagcctttcactcgattggtttcgtccagtgttcaagtagcaattttcagcagctgatttgatgttggttgcacggcaagcatgatcactggagaacacaagcaattgcggcagaccttgcaattgaaaacggggaaaggaaaccaaacgctgtgatcaaatcaaattaatgaaataaaaaaggaaaaaataggatgcaaacatgcgagaagctcatggatggtaatgctccattttctcctgtacagttcatgcatcttcagttgcttctggttgagatgtctgaatcactctctaccatctgtgcattaatcaaatacaaatacatgggcctaccgcacgacgacgaacgcacctgcttctgttgtgatgttttgtgttgcggctgtcaggctggatctctaggtaacatgattaattatactactgatggaatttgcaccgctgtaatattatttacgaatcacaatctgccgtgggattgttcttctgtcgtgtatgtatgtgtatatagatggatggctgttaagaaaatattgtgacgattataaagtttacctttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0724000, RefSeq:Os02g0724000