Os02g0817800

From RiceWiki
Revision as of 03:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0817800| Description = Similar to Telomere binding protein-1| Version = NM_001055059.1 GI:115449672 GeneID:4331151| Length = 4984 bp| Defi...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0817800

Description

Similar to Telomere binding protein-1

Version

NM_001055059.1 GI:115449672 GeneID:4331151

Length

4984 bp

Definition

Oryza sativa Japonica Group Os02g0817800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35972528..35977511

Sequence Coding Region

35974333..35974367,35975258..35975374,35975518..35976370,35976449..35976529

Expression

GEO Profiles:Os02g0817800

Genome Context

<gbrowseImage1> name=NC_008395:35972528..35977511 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35972528..35977511 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgttgcagaagaggttggactatggatcccatggccatcgtgctcccattaagccacgtgtcgcaacattggcgccggttaaacgctccacaagaataaggaaaaagcagatgtatgcacttgatttgcttgcgacagctgcagaaaaattgttggctgatcaagacaatttatctagtggacctaacataaatgaaacaccagaaggttatgttacaagcatgaaaccagttaaagcagaacagtttgatgaagcgtttccgttgagaagcgtggctgtgaaaaaagatgactgcaaaggttgtacagtaggctgtgcaggcatctgtggctttctcagacaagctaatatgtgcttggctgaaaactcgtcgactcaaaatctagctgattcagtactagagtcactaacagcaaagcctgatgtgttggctaaggactcatttgttagcagtaaaaaatcatgtcgattgggttttggtcttggcacaattccggagtatggatctgttggagtatgccaaccttggtccacaagatcagcagaggttaaacaagtgcatcgggcgagaccaacagcaatcagaagtcaagaagatagtgatgctgcagctctatgtgctttggtcgagaccatggatttggacaccaaacctcttgctgaggctagctctggtagtaactcaggagtgcacatctgcggccctgacagggggcataactcccatccctcgtgtttggctaaagtgcagcatgctgcagacagagatgatgacgaaaattcttctgggtgtgtacatccaagcacctcaggaaataaccgtggttatattccacattatataggtgaccgcaggataaggagattgtttgcctccaggttaaggaaggcagctcgcaacaggatatgtggagagatgtcttgtaaaggtaacaagctgagtttgtgtgaaaagaagatgcccactacgcgccgaagagtgcaacaaacaactttgaagaggaaaagacttgctcaactttactccgaaaaatcatctgatgaagaaaactgtgtcagatgctgttactactataattga</cdnaseq>

Protein Sequence

<aaseq>MVLQKRLDYGSHGHRAPIKPRVATLAPVKRSTRIRKKQMYALDL LATAAEKLLADQDNLSSGPNINETPEGYVTSMKPVKAEQFDEAFPLRSVAVKKDDCKG CTVGCAGICGFLRQANMCLAENSSTQNLADSVLESLTAKPDVLAKDSFVSSKKSCRLG FGLGTIPEYGSVGVCQPWSTRSAEVKQVHRARPTAIRSQEDSDAAALCALVETMDLDT KPLAEASSGSNSGVHICGPDRGHNSHPSCLAKVQHAADRDDDENSSGCVHPSTSGNNR GYIPHYIGDRRIRRLFASRLRKAARNRICGEMSCKGNKLSLCEKKMPTTRRRVQQTTL KRKRLAQLYSEKSSDEENCVRCCYYYN</aaseq>

Gene Sequence

<dnaseqindica>3145..3179#2138..2254#1142..1994#983..1063#ggggtttttctcctccaatcctttcccctctccctctcctcctcctcctcctccctgcgccttccacttgcagcgattcctcctccccgcccgctcttctcgaaccttctggaaccttcccccatcccccacaaggttacccttcttgatcggacaacctgcctgattatttcattttatttcctgctctgattatctcctgtatgttttcaagaaaaggagaaaaaaatggaaacttatatgcaaaattcgtttcttgtatgcacagcagaagcagcagatgggcatcgtcgtcgtcgtcgtcaaccaatcctaggcgacgagcgctgcggcggcgcgcgccatctgctcccctccgccgtgctccggtgctccccgatctgcgcctcccgctccggttggtcggctgtcggaacacgcagctgcaaaaccctagccgagctgcggcgatctcaacgctggcggcgaggccctcctcttcgtcggcgtcgacgggtaatgcggattcttccctctcgtcagttacgcgagatgctcgattgcatttcgggatggggtttatgctctaggtgtgaaccgaataattgccgagccgaaacatgtttgattcggtttgtgtatacacagatctagccagacaacatcatctcagatgtcggggtggggtgtagagcacaccatcaaccccaatttgtcctttttaagagcaaagatatactactacaagtagactgtggtttcagcgaatgtcatcttgccagatattatcggttttgatggggctcaccaatgatgaattctttccatttcagaagcatagaattcagcattttcttttagttgtgagctgtattaggatgtctttcggtattggatcaatgttcgctaaatcttgcttattcgacgcagaaaaatatggcgcatgttttatttacttccccttgctgtcactgaacacatttcctaaagtcaaggacaagacatggtgttgcagaagaggttggactatggatcccatggccatcgtgctcccattaagccacgtgtcgcaacattggcgccggtacatttttgttatgttcttatgttaagtgtgctacccacataatttggtaagttttaatgatcgattgtaattcaggttaaacgctccacaagaataaggaaaaagcagatgtatgcacttgatttgcttgcgacagctgcagaaaaattgttggctgatcaagacaatttatctagtggacctaacataaatgaaacaccagaaggttatgttacaagcatgaaaccagttaaagcagaacagtttgatgaagcgtttccgttgagaagcgtggctgtgaaaaaagatgactgcaaaggttgtacagtaggctgtgcaggcatctgtggctttctcagacaagctaatatgtgcttggctgaaaactcgtcgactcaaaatctagctgattcagtactagagtcactaacagcaaagcctgatgtgttggctaaggactcatttgttagcagtaaaaaatcatgtcgattgggttttggtcttggcacaattccggagtatggatctgttggagtatgccaaccttggtccacaagatcagcagaggttaaacaagtgcatcgggcgagaccaacagcaatcagaagtcaagaagatagtgatgctgcagctctatgtgctttggtcgagaccatggatttggacaccaaacctcttgctgaggctagctctggtagtaactcaggagtgcacatctgcggccctgacagggggcataactcccatccctcgtgtttggctaaagtgcagcatgctgcagacagagatgatgacgaaaattcttctgggtgtgtacatccaagcacctcaggaaataaccgtggttatattccacattatataggtgaccgcaggataaggagattgtttgcctccaggttaaggaaggcagctcgcaacaggatatgtggagagatgtcttgtaaaggtatttcaagctaatatcatctcttctacagctccatagcttgtgaaaagagaggatactttcttttcctacttaattttatttttcagctagttagcaggatttggactttatattgaccaagttttttatcatttaactaggtaacaagctgagtttgtgtgaaaagaagatgcccactacgcgccgaagagtgcaacaaacaactttgaagaggaaaagacttgctcaactttactccgaaaaatcatctgatgaaggtatcctaactgaaagtattttttgataatggaagctttattaaaaactcagatcctaactgaaagtatgtattgtgttgtccgtttcccttattgtatctaaaggtcacaaattatttagattgctccaggatgtaacattgcacatagttggtacgacttaatccttcttacacacagcattggatattctgaacccctgctttgatacacttcctaaaaatacacgggcatgccatttctgccagtggaactccattttgtatgggtgatccaaatccgcatgtgcatctgagggctatgatggcgtcctggatgtttattttagttttggggttgacttaaaagaatcattgcttaatttataaacacaatgacttacttttttctctcttttcagtcaagttaaccatcaaatctttcaacatccctgaactactaattgagatccctgaaaatgcaacagttggttcattgaaggtaaaacaccatatgtgtatcttctcagtaaaagttattggctgtaacatatatttattagttggcaaccatgtattcatgtgtgcatcctgatactctttccatttgctgtcaataatcttagtatcgttagtgttatcctgtgtcagctgttttggaaactcaaatatatcaagtatttgctgctctgtgatccatgctaatgtgtatttgactgatctagttttctagttttagtgatgcaacgtacttatacatagtgaaaaggtggtgccttttcgttacacttattttaatcttatatatgttgaatatttctgcctgtcagtgctttacacttaaatatttatctctgtgcatagacattggctttcttatgaaccacattatttctttctatttgtcttcagaaaactgtgtcagatgctgttactactataattgaacgcggtctccgtgtcggtatacttcttcaaggaaaaaatattcaaaatgacaacaagacgcttcgtcaggctgggatttgccgtggtaaaaaactaaatgacataggctttactctggaatgtgaagctgggcaagattctcaccctggtgtaatagtgccagaagaaatggattttgttggtgcatctgttgtggacaagtctgctacgtaggttacaagaaagcatcttctccttgcattattagacaggaggcttggatttacatgtgatgattagaaaacattgtcaggatgcatctgatagtttatgtcaacgttgttgttttgcagaagtttcggaaactacacgaccatagatttttgctgtatgtggtcatctaagggttttaatattccatttccagggtgaaatgcgaagaacctgctgagaaccagcagcttatgcaagattttccaggctgcagcttgagtgatcctggttctgttgattatcccgtggaatggagcacacaagaaacatcagcaagctcccaagccatcgtcccttttgcagatccaaactcactggcgctggccaatgtgccgctttctaggtcaaagcgaccagattttgggcaaagacggataaggaggcctttcactgttgctgaagtggagttgctggtggaagccgtcgagcaccttggaacaggaaggtttgtggcttcaatgccccagtagttttattcctataggcacgagatcatcaccgcagttcgcgtgtctcatgtggacctcttgatctggttgtctaggtggagggacgtcaaattccgcgcatttgaaaatgttcatcataggacctatgttgatctgaaggtaagcctaaatctatctcgttttttcttcagatctgcctctttctatcaggatcaggatgcactatctgaaaacctgtgaaacaatatttgatgaaccaggacaagtggaagaccctggtgcacacggcgagcatagcgccgcagcaaagaaggggagctccagttccacaggaactcctggaccgtgtgctcgccgcacaggcctactggtcggagcagcaggcaaagctccatggcgatccccctgttcctgaaatctgccctacctgatcctgatgatgattgatggagaaggcaagaatggccctcgtgtacaaatcggtgtaaaaattgttcagaagggattggttggttgacgtttgattgaaatttgtcgacagttgaaaactcacaacttggtccttcctactgttggttcgttaacaggaggaggaagaagaagaagaagaagaagaagaagcttatttgtaaatttcagcagagtttactgtctttgcaaaaatgcaagtcgttttggacaagttgagctggtttttgcatttgcttggacgtgatcctggctgggccgttgtgatgatgaggtgaggcccaagcccatgaaacaagatgggctttgtcatcgtgggaagcagaccttggctgttacggctgctgttgtctttatctaccggcctggccttcttatccaactgcaactaacaccaaccggccagctgccgtcaggcctgacgtcagcacaagcatggaagcagacgaactccacgtttagctccatcagaccatcaccattcggcgcggattctcgattagcatgtgcactcgtatcatcacaattagagcaagttcaatagaatagccaaccgttggctctaaatcatctataactaatataatagtttattcatacaatagttatctataaaaatatactgcaccattaat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0817800, RefSeq:Os02g0817800