Os01g0633100

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Revision as of 04:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0633100| Description = Similar to ADP-glucose pyrophosphorylase subunit SH2| Version = NM_001050189.1 GI:115438748 GeneID:4326594| Length =...")
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Gene Name

Os01g0633100

Description

Similar to ADP-glucose pyrophosphorylase subunit SH2

Version

NM_001050189.1 GI:115438748 GeneID:4326594

Length

8079 bp

Definition

Oryza sativa Japonica Group Os01g0633100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27010651..27018729

Sequence Coding Region

27014443..27014649,27015042..27015164,27015770..27015940,27016038..27016127,27016232..27016318
,27016399..27016454,27016547..27016640,27016767..27016879,27016946..27017018
,27017338..27017418,27017600..27017686,27017766..27017870,27018014..27018120
,27018216..27018276,27018369..27018470

Expression

GEO Profiles:Os01g0633100

Genome Context

<gbrowseImage1> name=NC_008394:27010651..27018729 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27010651..27018729 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaattcatgatgccattggatacgaatgcttgtgcacaaccaatgagaagggctggtgagggtgctgggactgagaggttgatggaaagattgaatattgggggcatgactcaggagaaagcactgaggaagaggtgctttggtgatggagttactggaactgcacgatgtgtgttcacatcagatgctgatagagacactcctcatcttcggacacaatcctcccgaaagaattatgctgatgcaagccacgtttctgctgtcattttgggtggaggcactggagttcaactctttcctctgacaagcacaagggctacccccgctgttcctgttggaggatgttacaggcttattgacatccctatgagcaattgcttcaatagcggaataaataaaatatttgtgatgactcagttcaattctgcttctcttaatcgccatatccatcatacataccttggtggggggatcaactttactgatgggtctgtgcaggtattggctgctacacaaatgcctgacgaaccggctggatggttccagggtacagcagatgctatcagaaaatttatgtggatacttgaggatcattacaatcaaaacaacattgagcacgttgtaatcttgtgtggagatcagctttacaggatgaattacatggagcttgtgcagaaacatgtcgatgacaatgctgacattaccatatcatgtgctcccatcgacgggagccgagcttctgactatggactggtgaagtttgatgattcaggccgtgtgatccaatttcttgagaaaccagagggtgctgatttggaatcgatgaaagttgataccagcttcctcagctatgcaatagatgacaaacaaaagtatccctacattgcatcaatgggaatttatgtcttgaaaaaggatgttcttttagacattctgaagtcaaaatatgcacacctgcaagactttggatcagaaattctcccgagagctgttttagagcataatgtgaaggcatgtgtcttcacagaatattgggaggatattggaacaatcaaatcattttttgatgctaacttggccctcaccgagcagcctccaaagttcgaattttatgatccaaaaactcctttcttcacctcacctcgatacttacctccagcaagattggagaagtgcaagatcaaagatgcaataatctccgatggctgttcctttagtgaatgcaccattgagcattctgtcattggaatctcttcacgcgttagcatcgggtgtgaactcaaggataccatgatgatgggtgcagatcaatatgaaactgaagaagaaacttcaaagctattgtttgaaggcaaggtcccaattggtataggcgagaacacaaagataaggaactgtatcatcgacatgaatgctagaattggcaggaacgtgatcattgcaaacactcagggggtccaagagtctgatcaccctgaagagggatactacataaggtctggaattgtggtgatcctgaagaatgcaaccatcaaggacgggaccgtcatataa</cdnaseq>

Protein Sequence

<aaseq>MQFMMPLDTNACAQPMRRAGEGAGTERLMERLNIGGMTQEKALR KRCFGDGVTGTARCVFTSDADRDTPHLRTQSSRKNYADASHVSAVILGGGTGVQLFPL TSTRATPAVPVGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHHTYLGGGIN FTDGSVQVLAATQMPDEPAGWFQGTADAIRKFMWILEDHYNQNNIEHVVILCGDQLYR MNYMELVQKHVDDNADITISCAPIDGSRASDYGLVKFDDSGRVIQFLEKPEGADLESM KVDTSFLSYAIDDKQKYPYIASMGIYVLKKDVLLDILKSKYAHLQDFGSEILPRAVLE HNVKACVFTEYWEDIGTIKSFFDANLALTEQPPKFEFYDPKTPFFTSPRYLPPARLEK CKIKDAIISDGCSFSECTIEHSVIGISSRVSIGCELKDTMMMGADQYETEEETSKLLF EGKVPIGIGENTKIRNCIIDMNARIGRNVIIANTQGVQESDHPEEGYYIRSGIVVILK NATIKDGTVI</aaseq>

Gene Sequence

<dnaseqindica>3793..3999#4392..4514#5120..5290#5388..5477#5582..5668#5749..5804#5897..5990#6117..6229#6296..6368#6688..6768#6950..7036#7116..7220#7364..7470#7566..7626#7719..7820#aattcctgacggcttcacccacgcttcccccggaaggccggaaatgctccgccgggacagcagagacggacatcgccggtgcggtggctccggcgccggcgccggcgggagcgctccccaccgtgaaaaccctagcgctcctgcgtccagtccccagcggtccgcgagaagccatcgacgcgacgcggagcctgatggtgatggacccgtcgtcgcttcctcggtcgccccgatttcctcccccgcggcaccgctgccgggttccggtccccggtggcgacgctcccggattggcttatacatccggaggccaatcctgcacgggatgccctgtaccaccatctcgtcctccgcttcaccgtctcggcgacacgctcggtgccactaactccctgtttccctaagtactcaattactcatatcattctcatcattaatgtcccttctgcaacaaaatggtaagctatgttttggacacattcccattcatttccctagtacagcggtggtggttcttttgagtttgcatatgatggaggggataggtttgcgttgcgttcatccttatgtatccaatattaagataagtgtagcatcggtagcacaatgtttccagaattcttttatatgcaaagagttcgtgtcaaacaagtaggcatgtttcaactggattgaagcatacaaccatatatatatatatatatatatatataacaaagttcaaaaggattgcattgattgaacaaagagataaccaattatttcctttttttttcttttgtatgttgtatggtgtttgctgaaaaggatcaaaacctgaacagtataactcaaggtttaatggaggagcaagaaatgtactaatatgacaccttataatagtttgtttggacaaaaggagaaggggattatgctcaatcccttcggcttggcagagaaacaaatcctgacagaataaaaagaacaagtttctatattttagattacgatagtttgacctgtacttttttccttcaagtgaagtgctatctcaaagttgtaaaaaaatagtttcttcaatttttcagttatatttattttgaaaatgggaagttacaatatctttttgatttaaatggtcttttccttcagaactggaccctcttacagaattgactagcagttaatttacctgtgcaaatgcttggatcaatgactagttactttcaaaagtcataagaacggtctctctttcagtatttgacggtgtgttgcttgttgaacatatagccatagccatgtattggtgtacaatgcaaattcatgttttataggcaagaaaactggactgccttggagagatgagttcaaaggtacaacattctaagttcttctgtttatgagaataatgtttacaatatgttaagattcagaattgccttgtgaaactcctaaatatatttttactgaacatggaactacaagtgttatattgcacagtaaaatacattaaacaaatttaataatatacttttgtactaataaatatttttcatattatatcaagactttactcgagttttctcggtcccatcattggttctctgaagcatggttcatctctattttttttagcatcataagaaatcggataagattgagctcatatttcacaaatgcgaatcaattttactgtaaaatagaactcaaatgaactgagactggagagcaagatagaagtggcaacatatggaaattgaaaagtcattttggtatttatctgaaagctttattgagctttgtgaatggaccttgcgtgagctctgaaaccagcttaccaccgttagttccagctcggttttctttttttccccttaaaggtttcatgcgtatcgtgacagatgttacataatgacaaattccccagctggagcacctttatccctgctgtttgcatgaaattagcttgtcttgtagttccctccagcaaaaagaagtctgaaacaaaacaacatttcgaaaaaaaggcatccatgagttagcatttctacagttgtctatagaggggaaggctgcacgacaaagtttccaggcttggaaacaacctcttatgtaaaatttttcgtatgtatcagatgatttgtttgcgttacggcatctccacctaacatcaccttcatcatgcgcctatggtctttctcttgcctgttttatacgtaaaattggaaacgacagaaacttttgccatctttattaaaggaaggcaaatatgcaaatataggcatcaagatcacagttagtggattatcatctttgtaggttaacatgtcctaccccaggggagcttatactcaagtactccatgcattttcatgaaatgagaaaaaacgatttttaagagaaatgtactttcttgtatttatgccaaatggcaaggactgaaagggaaaaactaagaaagggaacgttacagtaaggctctgtggggactggggacttcagagaaacgtgaaccctgcttccttcctctgcatgaacataacaccagaggtttccagcctttcacacagttgttgatggcttcacacaattcatctctacctcctgactctttataaggacccccagcatcaccacaattgcacaagtacaggcattagatccacaagaacacttgggcaggcaagcacctctttgatctttaagccgttgttatgttctatttctgagcatatggtttctagttatattctttttcttcattcgtttcatatctttgaagtgttgatgcaaatgcggtgaacaactatcaactgtgtactctccaagtgaatgcgaataatcatttcctgtgagaattgtgggctagataaacgaatgaaatgctgttttatctatgtcatgtgtggaaatttagttaattttccggtctttttatgcattgagatgggtatgctgtttttttagttgggtcccatcatcttgagaattctttcaaatttccttttctttatcctatataaaggatagagaaggcgtatgcctaggtgcaccaaccctgaaagttttattctaattgcgggaatggtttgtaatttttgcttgttcaggttctttttcgtggcctttcttttttttccccttattttgcttagtctttcacagtccaatttttgggaagtagtatatcttagtttggtcctaaggcaccatgttgtactgcaggaaaaaaaagagtaattgtattctgttttttccttgattactatatccctgttttaattaattttgtgcctttgttgtttgatgttggaacttcaatgcccataattagtcatttgacttgttttgggttttgacgctatcttgagtgccataggaaactggtagaatttagtaataattttatatagactgaatgttgagcccaccacaaatggtttccttctgtacaagtatttaataactcaagcacaggaaacatcagatctctaatctaaaggttaacaatgggctcaagcaggagcagtagttcagctctatctgtatatttagaagggctggatctacctgtccaccagcttttaattttaccctggcagctggataacttcttgtctgttaatttcatttagtgctgtgttattttcttcttgttgttcaggatggatgcttttgaatttctggaatttcgtattttgttctatctctttatgaaatgacgttatggcacactttttctgcatattcttgatgaaaataattacctagtcatttttttagttgcaggtttgtctgggactttgagtacccatgcaattcatgatgccattggatacgaatgcttgtgcacaaccaatgagaagggctggtgagggtgctgggactgagaggttgatggaaagattgaatattgggggcatgactcaggagaaagcactgaggaagaggtgctttggtgatggagttactggaactgcacgatgtgtgttcacatcagatgctgatagagacactcctgtaagcatttaactctcttgtaaatttgtcgttttctttttattgaatttgttatttcacaattgtgttccacaggcacaatgcacttattcaagattatagagaattgtagctttcatcactgcattcgacctatggacatcttgatttactaataatacagtaagaacttatgggacaaattttataagatggttaaccagccagaagattggataattgatgtggtgtagttccatgcaatatacaattaattatttcgtccttcagttgactttccctcttagtttgtaggcgtattcatgaattgttgttccatatgtgtataaatgcacaggaagtgcgtatataccatccacttcaagtaatctaactgagcttaaaatttacagcatcttcggacacaatcctcccgaaagaattatgctgatgcaagccacgtttctgctgtcattttgggtggaggcactggagttcaactctttcctctgacaagcacaagggctacccccgctgtaagaaagtgaaacactatttatatctaatgttgactactgtactgtgcagataatagatttttaattgtggataacatacttagaacttaagaaaaagtttggaatctcttgtcagtttaaactttaaacaagtgctaattttaacttgctgttcttaatgtctgtcgcttaacttgattgagtgactgcaaatcaagttacaacaacatctggtatcatttggttatttcgacttgcttactatgtcatacggttactacattactatccatttggaactactctttctaggggcctagactaatgagacacactaatcaatatcagagtatcacatcaacacaactaagtattagatacaaggatgctaatcaacaagttatctacttttagaacttcatccgagaaaacatatgctagtagtatgttgtattttaccatgatgcctaaaagcatcaaatttaattctctcataaccttaagccatctaactttcactcatccaatcaggctatcaatgactaggagatagatgattcgaaatttcgttgtcaactgtgaatgaataatctaaattctatttttatttttctattacttaggttcctgttggaggatgttacaggcttattgacatccctatgagcaattgcttcaatagcggaataaataaaatatttgtgatgactcagttcaattctgcttctcttaatcgccatatccatcatacataccttggtggggggatcaactttactgatgggtctgtgcaggtaatttacctccatattcttgatatgccttagtggaaaccagttactagcagtagcaggtagcaacattaattgaactaacgttggcaatatataggtattggctgctacacaaatgcctgacgaaccggctggatggttccagggtacagcagatgctatcagaaaatttatgtggatacttgaggtaattaatttgtttcttccctgatattaatgggtaataattcttgcagaatgtaacttttatcatggatcataaaataccccttctattgcattcctgtccaggatcattacaatcaaaacaacattgagcacgttgtaatcttgtgtggagatcagctttacaggatgaattacatggagcttgtgcaggtgcattatgttgtcattctttttacttcatgtattcttgattttcgattgagcaatactttgacatgtaatacttgcagaaacatgtcgatgacaatgctgacattaccatatcatgtgctcccatcgacgggaggtaaattagttcttgtgcatcctgattctatgagcgtgccttatccaacataagatgcatgtgttctaattttcttcttttttattgggaagccgagcttctgactatggactggtgaagtttgatgattcaggccgtgtgatccaatttcttgagaaaccagagggtgctgatttggaatcgatggttagtaattgtcatctttactgttctcttgagaaatcttttctttagttcatctgcacggttggtctgtcagaaataaatatctatttctgcataatgctgcactaaatcaactgatcactgcagaaagttgataccagcttcctcagctatgcaatagatgacaaacaaaagtatccctacattgcatcaatgggaatttatgtcttgaaaaaggatgttcttttagacattctgaagtaagtgtcacccatttgtgatagttcggtccacttcctatgtcttctgataattcgtattcttaggtcaaaatatgcacacctgcaagactttggatcagaaattctcccgagagctgttttagagcataatgtgaaggtaagttccgaacaactgtaatccgggtttcctacataatctccatctattgcttttgcatattcaatggtttagttaatgctacctccacccacagtggacatcaacacagtctgaaaacacaagtttgaccagtagtttccattgtgatatacttatagagtatgataaatttacagtctgaatatccttagtgttttgtggttgctggagcgctgggagtaactagcatgacaacacccagagcaatatacagatcaatgagctttttacattttgcctactctatataacttgaactagcactatattgttttaggcatgtgtcttcacagaatattgggaggatattggaacaatcaaatcattttttgatgctaacttggccctcaccgagcaggtattgccacatatgtattctgtacaactgatgcactctttaacatattgcgagacaccttgtacagtaatacccaaagatgtcttacagagtctaatgatttacccattattcttcagttaacttactgctaacaccaatttgtatacaaaagttgtctgaacatgtttctccgttccagcctccaaagttcgaattttatgatccaaaaactcctttcttcacctcacctcgatacttacctccagcaagattggagaagtgcaaggtatgagtcatgtaaaccacagttgttgcttcagatcacagcaaatgcaatttaaattttggatcttttttttgtgcagatcaaagatgcaataatctccgatggctgttcctttagtgaatgcaccattgagcattctgtcattggaatctcttcacgcgttagcatcgggtgtgaactcaaggtactttatcaagacataaagctcatagtttggacattcaatgcatcaaaatttgatgtcttattaagattagattgattcataggtactgtttggaaactaccaattattctcatgtagttttgcaattctaaaattcacaggataccatgatgatgggtgcagatcaatatgaaactgaagaagaaacttcaaagctattgtttgaaggcaaggtcccaattggtataggcgagaacacaaagataaggtgagccacatctggactaatgcttacatattactgtccttacctggcaatatcgtgtttccaaatgtatgagaccttcgtttcatgaattttaggaactgtatcatcgacatgaatgctagaattggcaggaacgtgatcattgcaaacactcaggtgagcaagtatatgtatttaactactccaaagtcgatgaactcatcttttataaacacttggtaaccacacgagttcactgcgtatgatagggggtccaagagtctgatcaccctgaagagggatactacataaggtctggaattgtggtgatcctgaagaatgcaaccatcaaggacgggaccgtcatataaaagcatagataggccttggaatcgcacctccagtcatctgaaaactggcatccattgatgtgggattttgatgcatgagttggattcaagacggatagcgtagcctccatggcgaagtggtgtttttggtttagctatatgcctatatgcaataagctgcctgaggaagtcgcgcaaccttttgtgtaatttcaggtttatgtacttggtttgttttggaatgggaactctattattggtattctgaagtttgcacctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0633100, RefSeq:Os01g0633100