Os10g0558900

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0558900| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001071899.1 GI:115483393 GeneID:4349365| Length = 2021 ...")
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Gene Name

Os10g0558900

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001071899.1 GI:115483393 GeneID:4349365

Length

2021 bp

Definition

Oryza sativa Japonica Group Os10g0558900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22450841..22452861

Sequence Coding Region

22451155..22451400,22452093..22452404

Expression

GEO Profiles:Os10g0558900

Genome Context

<gbrowseImage1> name=NC_008403:22450841..22452861 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22450841..22452861 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tgcatactcatcagagacagaaaatattggactctgcctgctgcaattcatgccaaggccgttggtgttgagccgaagtcgttgttaagtgtatttgaagggcaagctaggggtttgaggatgaactactatccaccgtgcttgaaagctgacaaggtgttgggtttgtcaccgcacactgatccaggtggcttgacactgcttctccaggtgaatgatgtacagggcctgcagatcaacaaggatggcaaatggttctccgtgaatgctctgaatggtgcactcatcgttaacattggcgacacacttgagatcctgagtaatggaaagttcagaagtgttgagcacagggccgtggtacatccaagcagagagaggatttcagcggcactgttctactatccgtgccaggatatggtgatcagccctctgccggactttgtgaaagatggtaaagtgaaatacaaaacaataagctaccaggatttgctgacagagtacttcacagcagagcttgatggaaggaaccggctaaagaaaatgaagctggaaccgtag</cdnaseq>

Protein Sequence

<aaseq>CILIRDRKYWTLPAAIHAKAVGVEPKSLLSVFEGQARGLRMNYY PPCLKADKVLGLSPHTDPGGLTLLLQVNDVQGLQINKDGKWFSVNALNGALIVNIGDT LEILSNGKFRSVEHRAVVHPSRERISAALFYYPCQDMVISPLPDFVKDGKVKYKTISY QDLLTEYFTAELDGRNRLKKMKLEP</aaseq>

Gene Sequence

<dnaseqindica>1462..1707#458..769#atgtactgacagtagctctagctcagtttgagatgtgcaaatagtataacaaaagcattacttatgcaacaaaaactacagctcatcaaccatggagtgccagatgaagtgattgcaaatctcaagaacgacttggttgagtttttcagtcagccactggatgccaagaaggaatactcacagctgcccaataaccttgaaggttatggacaggccttcgttgtgtccgacaaccagaaactagactgggcagacatgctataccttcaagtctgtcctaccgattcaagggacttgagattctggcccaattaccctgcctctttcaggtgatactaccgacaaattattatgcaactaattactccattgataagcatatgttcattataacttttaaagcatacatatgtccatttattaacttgaaatatctgaaaattaggcattccattgatgcatactcatcagagacagaaaatattggactctgcctgctgcaattcatgccaaggccgttggtgttgagccgaagtcgttgttaagtgtatttgaagggcaagctaggggtttgaggatgaactactatccaccgtgcttgaaagctgacaaggtgttgggtttgtcaccgcacactgatccaggtggcttgacactgcttctccaggtgaatgatgtacagggcctgcagatcaacaaggatggcaaatggttctccgtgaatgctctgaatggtgcactcatcgttaacattggcgacacacttgaggtaatgactaatcccgttctcggggcaattgtatcgtatcgatgtaatttcatgagttaaataaagcttttatctttatactattataaaagttgaagatatttttcccggtattttggtgcgtcatccatgtatgagtcagtttctaagttcgttcgcttttggaaatacatatccgtatttgagtcggtttttaagatagttcacttttgataatacagaaggaataatataagaaatctgtttaaaaaactcgcatgctaacatgaggtgatcggactcctaactgcagctcatgattttctaaatatatatatatatatatatatatatatatatatatccaaacgaactcccacaataaatttcatcttaactaaaccatataacaataataatattaaaatagactccaccagttgcaacacacgagcattttttctagttatttaaaaaaaaagaactaatcccgtttgatataggatattaggcagattattttattgtgaatcaaaatatttttaagaaataaatttaacaaatagcttaaaacaaatgatcagtacaaaatcattttggttgtggccgataagccaatgagtagacaatcaaagccgctgatgctcaacttttggatcaacatgtttttctgatgtacaagtacggtcgatgtgcgctgttgatgtgtgcagatcctgagtaatggaaagttcagaagtgttgagcacagggccgtggtacatccaagcagagagaggatttcagcggcactgttctactatccgtgccaggatatggtgatcagccctctgccggactttgtgaaagatggtaaagtgaaatacaaaacaataagctaccaggatttgctgacagagtacttcacagcagagcttgatggaaggaaccggctaaagaaaatgaagctggaaccgtagccatcgaccatgatgcatgtaacaattttataagaagaacctgctttcaggttgtgtcctacttactgtatctgctatctactctcttcatcctaaaataaataaacatagtacatatatgatacatcatagtaccataaattagaaaatgttacatcgtgtactatgtttttttaaaaaatttgggatataggaaatatatgtcgtgaagaataatgtattcaggcatcaagctttatgcataattagcttatgcctgtaaactgcgttgaacatgttcagtttgatgaaacagacatggaagtttgcctctt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0558900, RefSeq:Os10g0558900