BGIOSGA016936

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Revision as of 04:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016936| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016936, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016936

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016936, complete gene.

LocusTag

OSJNBA0005N02.4

Ensembl Transcript ID

BGIOSGA016936-TA

Ensembl Protein ID

BGIOSGA016936-PA

Length

3401

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27306152..27309552

Sequence Coding Region

27306152..27306290,27306700..27306776,27306881..27306929,27307456..27307540,27307679..27307931
,27309232..27309552

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27306152..27309552 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27306152..27309552 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAGCGGCGGCGGTGGCTGCGGCAGGAACGGCGCTGTGAGGCAGTACATCAGGTCCAAGGTGCCGAGGCTGAGGTGGACCGGGGAGCTCCACTGCAGCTTCGTCCAAGCCATCGAATTCCTCGGTGGCCAAGACAAGGCTACACCTAAGCTCATTCTTCAGCTCATGGGGGTGAAGGGGCTGACCATATCTCATGTCAAGAGCCACCTCCAGATGTACAGATGCTCCAGGCTCGTCTCCCATGGCACGGGAAGGAGATCAGAGATGCAACCACAGCTGCAAAGGAAGCACTCATGTGGTGCTGATGAGCAAGTCCCCAGAGAATTCCTGTGCCCCCCTCTGAAAAGGACCAGGATGGGGACAGAAGCCACATACAAAGGCATGCAAGGAAGCCAAGGAATCAGTGAGATGAGGACTACTGGCACCCAGTACTGCATTGATGATTACATGCAAGCCATGGCAATGGAGAGGAGAATAAAGGAGGAGGGCCTCAGATGGCAGAGGGATGCTGCTGCTGCTGCTGCTGCTGCAGATGGTGGTGCTGCTGCTTCCAACCTCCAAACCGTGGGATGTTCGGTGCAAGAATCTGACCCCTTTAAGATCATCAAACCAGAAGTGCACCATCTTGGTCCCGTGTTGAAGCTGCAATGCTCCAAGGTGGAGAACAGTGGATTCATCTCCAGCAGCACCGGCACGGCTGCAAGGGATCAACCGGAGCCGCCGCCGCTGGAGAAATGTTCGCTGTCACTCTCCCTCGGTCCAGACCCCAAATGCATGCCGGCGATCGCCTCGTCGCCGAGCGAAAGCAGCTGCATCCTCTCGTCGTCGTCCAGGAGCTTCAGCGACTGCTCCGGGAACTCAGGTTGTCTTGTTGCCCCGGGTGTGAACTTGGAACTCTCCATGTCCATCTGTGGATCTTAG</cdnaseq>

Protein Sequence

<aaseq>MGSGGGGCGRNGAVRQYIRSKVPRLRWTGELHCSFVQAIEFLGGQDKATPKLILQLMGVKGLTISHVKSHLQMYRCSRLVSHGTGRRSEMQPQLQRKHSCGADEQVPREFLCPPLKRTRMGTEATYKGMQGSQGISEMRTTGTQYCIDDYMQAMAMERRIKEEGLRWQRDAAAAAAAADGGAAASNLQTVGCSVQESDPFKIIKPEVHHLGPVLKLQCSKVENSGFISSSTGTAARDQPEPPPLEKCSLSLSLGPDPKCMPAIASSPSESSCILSSSSRSFSDCSGNSGCLVAPGVNLELSMSICGS</aaseq>

Gene Sequence

<dnaseqindica>1..139#549..625#730..778#1305..1389#1528..1780#3081..3401#ATGGGCAGCGGCGGCGGTGGCTGCGGCAGGAACGGCGCTGTGAGGCAGTACATCAGGTCCAAGGTGCCGAGGCTGAGGTGGACCGGGGAGCTCCACTGCAGCTTCGTCCAAGCCATCGAATTCCTCGGTGGCCAAGACAGTGCGTTTCTTCTTCTTGCTCCTGGCTACGTCCTCTTCATGCACGGCGTTTCATCGTGTATTTGTTTTTCTTTTCTCTGTGTGCATTCGTTGGTAGACTATTTTTCACCCTCTCCAGTCCATGCCTGCATTCCATAGCTATTTATTTCCAGGGATTGCTCTTCTTTCAGTTGTGACAGCCATGTTTTATGTTTCCCTCGGTTGTTAGTTTCTTTGATGTCGTCCTAGCTATAGCTTGTTCATGTTGATGTCTTCTTTTTTTCATGAGAGAACAACTTTCTCACAGTACCTTGAATTGTTTTCTGCCTTTCTTTTGCTTGTTACTCTTCGTCCTTTAGGAGTTTAGTATTTTTTTTTCCTAGCGATCTCTTCGTCAGGCTAACTTGTAAACTTGCTGGTTTGAATTGCAGAGGCTACACCTAAGCTCATTCTTCAGCTCATGGGGGTGAAGGGGCTGACCATATCTCATGTCAAGAGCCACCTCCAGGTTCTTATCCCTTCAGTCTCCTGCAGCCTTCTCTCTCTCTCTCTCTCCCAGAGAGCATGCAAATACAGAAATTCTGATTTTGTCCATTTATCCTTTTGAAACAGATGTACAGATGCTCCAGGCTCGTCTCCCATGGCACGGGAAGGAGATCAGGTGAGAGATGATTGTTTTTCTTCCATCATTACGTTATTTGGTTCTTCATCCTCCCAACGTCAGAGGTTTTAATTTGCCTCCCTGTTCCCTGGGGATACGAGATGATAGTAGTTGTGGCAGCAGTAGTTGTTTTTCTAGTGTTATTATGTCAACGCTTTTTGTTGTTTAGTTGGAGTACATTGGTTATAATATTCAGAGGAAAAAGAAGGCTCATGTCCACAGTAGAATGACCATCCAGTTTATTATTATTATTTTTTAACCAAATAGATGCCTTGTTGTTTGTGTGAGCTATTTTTCGGTGTTAATTATGTGGGGGCATCTCTAAACTCCCCTTGCCACATGCCTACTGCGCCATGCAACTAACCAGTCTTACCTTCTCATGGAGTCATGGGGTACCTTCATCATGCAAATCCTCTGTTCAAAAAGATAGGAAGATAGCTAGATATATGAGAAAAAGAAATTGTTGTTGCACACTTTAGATGTTGCTAATGGAAAGCCAAACCCCTTTCTTTCATTGTACCATCAGAGATGCAACCACAGCTGCAAAGGAAGCACTCATGTGGTGCTGATGAGCAAGTCCCCAGAGAATTCCTGTGCCCCCCTCTGAAAAGGTTTGGGCCTCAACTTTCCCAACTTTGAATTGTGTTCAAGTTAAAGACAAGCTTTTTGAAGGCCTAATCTTGACACAAAGTCACCTTTTCCCCTTGGGTGTCCATTTACTCTCTTTTTTGGGGTCTTTGGATGAACAGGACCAGGATGGGGACAGAAGCCACATACAAAGGCATGCAAGGAAGCCAAGGAATCAGTGAGATGAGGACTACTGGCACCCAGTACTGCATTGATGATTACATGCAAGCCATGGCAATGGAGAGGAGAATAAAGGAGGAGGGCCTCAGATGGCAGAGGGATGCTGCTGCTGCTGCTGCTGCTGCAGATGGTGGTGCTGCTGCTTCCAACCTCCAAACCGTGGGATGTTCGGTGCAAGAATCTGACCCCTTTAAGGTACATCAGCTGAAAAGAAAAGTTAAAAGAAACATTGGGAAAACTTAATCAAAAGTATCACATTCTCTTGGAATATTAACTGGTTTCACACGCTGACTTACTCATTCTATTCAACCATTTATAAATGGATCTACTGCAATTTAGCTAAGCTCCTACGTACACATTGCATTTGTCAATTTGCCATGCAATATATTAGATTTTTATATATATCTGTAGGGCCCACTTGTCATACATGGATTTGGTCAAGGCGGCAACAAAGTAGTTTGTAAAAAATATTTTTTATTGGGCTGTGCATGTTGTATTGTCTTGACCATACCTATATTTTCTATGTTCCTGATTTTGAATATCTTAGGTTGTTTGACTACTGTACAATCCGTATCCTGCTGCATTTTTAGAATTGTCAGTAAATGTTTGTTCCCTTTATCTTACTACATGTGCAAAACCCAGATAAGCTCATGAATACTTGTAGTAGTAATTTCAGAAGGACAAGGATGCACATGCACTGATATGAGAAGACTGCGAATATAGTCCTTAAAAGTTGAAACCCCCTGTCTTTAACAGTGATGACCCAAATAACTCCAGGCATTTACCTCACATCGCAGTAGTGATTTGTCATTTGTGGTAGTAGCGTTCTGCAGCCTTCAATTGAAAGCCTTCCATGTTGCACCCAGTAGAATTCATGCTGATAAAAGTGCAGACAGAATTAACCCAATTAAGACTTCACTGTGGTTTACCTGAGTCTGAAAAAACTGCTTATATCCTACGGCTTCTGGAACGCATCAATAGCGTAGATGTTGTACGTTACGGCACAGATCTGCCGATCCTTGTGATTTTACTGCAGCAAGGAAAACGATTTTCAGCAGGGTCAAGTCCTGGTAAAAGTTGCACGTTCAAGGAAATAAATTTGATAGTTACTGCATGCGTACTTCTCCTTAGGGCAGCCACAATGTTTGTCTATAGGCTCTCTACAAGAGATCCATGTCAGCATATTTTCCTACTTGAAAGAGATTAAATGAAGAGAGAGAGCAAAGCTATCTACTAACCTGGAGATAGTCTATAGAGAAAAACGAGGCAATGGATTAGAGAGCTATAGATACCCATGTAGACATACCATTGAAGTGGTTTACTATTAATCTAATCTATTGCTGAGATGTACATGTTTTATAGTAGCACCTTACTTTATCATTGCGGGTGCTCTTAGACCATACTGTCATCAATGCCCATTATCCTAAGACCATTTTTTGTCATCAATGAAGGAATTTAATCCATCTAAACTGTTGCTTTCATTGGTGTCGTGCAGATCATCAAACCAGAAGTGCACCATCTTGGTCCCGTGTTGAAGCTGCAATGCTCCAAGGTGGAGAACAGTGGATTCATCTCCAGCAGCACCGGCACGGCTGCAAGGGATCAACCGGAGCCGCCGCCGCTGGAGAAATGTTCGCTGTCACTCTCCCTCGGTCCAGACCCCAAATGCATGCCGGCGATCGCCTCGTCGCCGAGCGAAAGCAGCTGCATCCTCTCGTCGTCGTCCAGGAGCTTCAGCGACTGCTCCGGGAACTCAGGTTGTCTTGTTGCCCCGGGTGTGAACTTGGAACTCTCCATGTCCATCTGTGGATCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016936