BGIOSGA017204

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Revision as of 04:41, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017204| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017204, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017204

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017204, complete gene.

LocusTag

OSJNBA0043L09.28

Ensembl Transcript ID

BGIOSGA017204-TA

Ensembl Protein ID

BGIOSGA017204-PA

Length

4892

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31290293..31295184

Sequence Coding Region

31290293..31290370,31290508..31290665,31290860..31290950,31291044..31291163,31291235..31291303
,31291423..31291514,31291647..31291749,31291830..31291937,31292018..31292080
,31292142..31292213,31292391..31292468,31292547..31292609,31292686..31292749
,31292886..31292971,31293524..31293637,31293828..31293905,31293980..31294051
,31294136..31294371,31294553..31294643,31294773..31294961,31295149..31295184

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31290293..31295184 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31290293..31295184 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAAAGGACGAGATTCGTAGGTTTGATTCATTTGAGGCGTTTGAAGAGATATGCTCATTAGCGGAGCAGAATAAGGTTGATTTTGTGCTACTTGGTGGTGACCTTTTCCATGAGAACAAACCTTCACGTTCAACCTTAGTTAAGACCATTGAGATTCTACGGCGTTACTGCTTGAATGACCAGCCAGTGAAGTTCCAGGTTGTCAGTGATCAGACAATCAACTTTCCAAACAGATTCGGCCAAGTAAATTATGAAGATCCAAACTTCAATGTTGGATTGCCTGTGTTCACTATCCATGGAAACCATGATGATCCAGCTGGTGTGGATAATCTCTCTGCAATTGATATTCTCTCAGCCTGCAATCTTGTAAATTATTTTGGGAAGATGGACCTTGGTAGCTCTGGTGTTGGTGAAATAGCAGTCTATCCTGTACTCGTAAAAAAGGGTACAACTTTTGTTGCGCTCTATGGCCTTGGAAACATTAGAGATGAACGATTAAACAGGATGTTTCAGACACCTCATGCTGTACAATGGATGCGACCTGAAACTCAAGATGGAATGTCAGTATCTGACTGGTTCAATATTCTTGTTCTTCATCAGAATAGGATAAAAACAAACCCTAAAAGCGCAATCAATGAGCATTTCTTACCACGTTTTCTGGACTTTATAGTATGGGGCCATGAGCATGAATGCCTTATTGATCCCCAGGAGGTACCTGGGATGGGTTTTCACATCACTCAACCAGGCTCATCAGTTGCAACCTCCCTGATTGATGGTGAAGCAAAACCAAAGCATGTTCTCTTGTTAGAAATCAAGGGAAACCAGTATAGGCCAACCAAAATACCTTTGAGATCCGTTAGGCCCTTTCACTATGCTGAGGTTGTGTTAAAAGATGAAGTGGATGTTGATCCCAATGATCAGGCCTCTGTTCTTGAACATTTGGATAAAATTGTAAGAAATCTTATTAAGAAGAGTAGTCAGCCAACAGCCAGTAGACCAGAGACCAAACTTCCACTAATTAGAATCAAGGTAGATTACTCTGGGTTTTCAACAATTAATCCACAACGATTTGGTCAGAAGTATGTCGGGAAGGTTGCAAACCCCCAGGATATTCTTATCTTCTCAAAATCAGCAAAAAAGCGTCAGACTACTGGAGTAGGCAATATTGATGACTCTGAGAAACTTCGTCCCGAGGAACTAAACCAACAAACTATTGAAGCTTTGGTTGCCGAAAATAACTTGAAAATGGAGATTCTTCCAGTTGATGACTTGGACATTGCATTGCATGATTTTGTGAGCAAGGATGACAAGATGGCGTTTTATGCCTGTTTGCAGCGGAATCTTGAAGAAACCAGAACTAAATTGAATTCGGAGGCAGATAAATTTAAAATAGAGGAAGAAGATATAATAGTCAAAGTTGGCGAGTGCATGCAGGAACGTGTGAAGGAAAGGTCCCTCCGCTCCAAGGAAGATTCACGGTTCACGTCAAGCTCTCAAAACTTGGTGGATACTGGAGGTAGATCTGTTACAGCTCAAAGTAACCTGAACTCTTTCAGTGATGATGAAGACACCAGGGAGATGCTTCTCGGTGCAAGAACAACTAATGCTGGAAGGAAAGCATCTGGATTTACAAGACCCTCTAAAGATGCTACCGATGTTGCCAAAACTGGAACTTCCAGAAGGGGCAGGGGAAGAGGGACGGCCTCAATGAAGCAGACCACTCTGAATTTCAGCCAATCAAGGTCAAGTGCTGCTATCCGCAGTGAGGAAGTGCAATCTTCTTCAGATGAGGAAAATGAGACTAATGAAGCAAACGAAGTTGTTGAATCTTCAGAACCGGAGGAGAGTCCCCAACAAACTGGACGGAAAAGGGCAGCTCCTAGAGGTGGTAGAGGTAGGGGTAGAGGCGCTACTGCAAAAAGGGGTAGAAAAGCAGATATTTCATCCATCCAGAGCATGCTGATGAGCAAAGATGATGATGACGATGATGAAGATGACAGGCCGAAGAAACCTCCACCTCGGGTCACTAGGAACTACGGAGCTGTTAGGAGGAGATGA</cdnaseq>

Protein Sequence

<aaseq>MEKDEIRRFDSFEAFEEICSLAEQNKVDFVLLGGDLFHENKPSRSTLVKTIEILRRYCLNDQPVKFQVVSDQTINFPNRFGQVNYEDPNFNVGLPVFTIHGNHDDPAGVDNLSAIDILSACNLVNYFGKMDLGSSGVGEIAVYPVLVKKGTTFVALYGLGNIRDERLNRMFQTPHAVQWMRPETQDGMSVSDWFNILVLHQNRIKTNPKSAINEHFLPRFLDFIVWGHEHECLIDPQEVPGMGFHITQPGSSVATSLIDGEAKPKHVLLLEIKGNQYRPTKIPLRSVRPFHYAEVVLKDEVDVDPNDQASVLEHLDKIVRNLIKKSSQPTASRPETKLPLIRIKVDYSGFSTINPQRFGQKYVGKVANPQDILIFSKSAKKRQTTGVGNIDDSEKLRPEELNQQTIEALVAENNLKMEILPVDDLDIALHDFVSKDDKMAFYACLQRNLEETRTKLNSEADKFKIEEEDIIVKVGECMQERVKERSLRSKEDSRFTSSSQNLVDTGGRSVTAQSNLNSFSDDEDTREMLLGARTTNAGRKASGFTRPSKDATDVAKTGTSRRGRGRGTASMKQTTLNFSQSRSSAAIRSEEVQSSSDEENETNEANEVVESSEPEESPQQTGRKRAAPRGGRGRGRGATAKRGRKADISSIQSMLMSKDDDDDDEDDRPKKPPPRVTRNYGAVRRR</aaseq>

Gene Sequence

<dnaseqindica>1..78#216..373#568..658#752..871#943..1011#1131..1222#1355..1457#1538..1645#1726..1788#1850..1921#2099..2176#2255..2317#2394..2457#2594..2679#3232..3345#3536..3613#3688..3759#3844..4079#4261..4351#4481..4669#4857..4892#ATGGAAAAGGACGAGATTCGTAGGTTTGATTCATTTGAGGCGTTTGAAGAGATATGCTCATTAGCGGAGCAGAATAAGGTTTGTAGGAGCTGCACATTTTTCCATTCTTTTCTGCTTGTGTTGCAAAATTTATTGGCCTGCTCATTCTGTTGGGGGATAACCTTCTATTTATGAATTATGAATTATAATATGATGGAAATCATACTGAATTGCAGGTTGATTTTGTGCTACTTGGTGGTGACCTTTTCCATGAGAACAAACCTTCACGTTCAACCTTAGTTAAGACCATTGAGATTCTACGGCGTTACTGCTTGAATGACCAGCCAGTGAAGTTCCAGGTTGTCAGTGATCAGACAATCAACTTTCCAAACAGGTTTTGACGATGAGTTATATCACTCTATCATGCCATTTTTTTCTTGAGTGTACTCTAAATTTGGTGATCCCTCAATGTAATCTTTCATAAAAGTGTCACTTTTGCTGAAATTTAGGTTTGATATATCATACGTGTATGCAGATATGCATTTTCCCCTTAATTTTCTTACATGAATTTTCTTGGTACAATCACAGATTCGGCCAAGTAAATTATGAAGATCCAAACTTCAATGTTGGATTGCCTGTGTTCACTATCCATGGAAACCATGATGATCCAGCTGGTGTGGTATGAGAATCTCGTTCTGACATTCTGTTATTATGGTTATTATGCTTATGATGGGTGCCAGCTTTTCTCATGCATTCTTGCCCCTCTCTGTAGGATAATCTCTCTGCAATTGATATTCTCTCAGCCTGCAATCTTGTAAATTATTTTGGGAAGATGGACCTTGGTAGCTCTGGTGTTGGTGAAATAGCAGTCTATCCTGTACTCGTAAAAAAGGTGCGCTACTTCAGCTGCAGGCAAACCATGAACTCTCACATGTTAATCCTCTGTTTTTCCTGTTATTTCAGGGTACAACTTTTGTTGCGCTCTATGGCCTTGGAAACATTAGAGATGAACGATTAAACAGGATGTTTCAGGTGCATTTCCATCGACTTTTCTAAGAATTTGAAGTTAATTCGCAACTTGGCAGCACTAGAGCAAGAAACTTTCTTGATCATTTGAACATTGATATCATATTTTTATATCAATTATTCAGACACCTCATGCTGTACAATGGATGCGACCTGAAACTCAAGATGGAATGTCAGTATCTGACTGGTTCAATATTCTTGTTCTTCATCAGAATAGGTATGGGCGGTGAATGAATGGTGACAAACTGTAGTGGAATGTCAGTATCTGACTGGTTCAATATTCTTGTTCATTTTTTTATAATCTTCATGCCGCTTACTGAAAAGAAAATTGAAACCTGAAATCATACAGGATAAAAACAAACCCTAAAAGCGCAATCAATGAGCATTTCTTACCACGTTTTCTGGACTTTATAGTATGGGGCCATGAGCATGAATGCCTTATTGATCCCCAGGTAATGACTTGGATTTTATTTGATTTCTTTTTTAAAAAATAACGTGAATATGCACTTGTCATATGATCAATTGTTTATAGGAGGTACCTGGGATGGGTTTTCACATCACTCAACCAGGCTCATCAGTTGCAACCTCCCTGATTGATGGTGAAGCAAAACCAAAGCATGTTCTCTTGTTAGAAATCAAGGTCCTATTGAAAGCTCTCCTCTTCATGTTGAACAAAACTTCAGTTTGGTGTTTTCTCATTCCATTTTTATTCTTAAACAGGGAAACCAGTATAGGCCAACCAAAATACCTTTGAGATCCGTTAGGCCCTTTCACTATGCTGAGGTATGATACCCCTCATTTCATGCTTATTTCAGTGCTTGGGTCTCACTGTCCTAATATATAGGTTGTGTTAAAAGATGAAGTGGATGTTGATCCCAATGATCAGGCCTCTGTTCTTGAACATTTGGATAAAATTGTGAGTTTTCAGTTTTCCATGATTTGTTATAATCTTTTCCATTTTATTGAGAAGCATGGTGGCATGCTGGTGTGGAATTGGTTCAACATTGGCTTATTTGCCCGTTTGTTGTCAGTCTAGTTTTCTTTGTTGAATGAAGTCGTTAACCCTCAATCTCATAATACTCAATTGTTTCAGGTAAGAAATCTTATTAAGAAGAGTAGTCAGCCAACAGCCAGTAGACCAGAGACCAAACTTCCACTAATTAGAATCAAGGTAAAAAAAACAGAAGAGATGTACTCCGCACAAATTAATCAAGACAGGAACAATGAAAGTGCTCATATTGTTCTGTAGGTAGATTACTCTGGGTTTTCAACAATTAATCCACAACGATTTGGTCAGAAGTATGTCGGGAAGGTATCTGAGTCCCTAATTAGGTTCTTACTCAGAATTCTTACCTGAATGAGCTTATTTGATAGCTTCTTGTTGTAAGGTTGCAAACCCCCAGGATATTCTTATCTTCTCAAAATCAGCAAAAAAGCGTCAGACTACTGGAGGTATTCCTTTATGTTTAAGAAAGACAGTGCACAAGTTATTTACATAGTGGCAGAATGCATCAAGCTATGAGGAGCAACAGATGCCATGTTATTCTGACTTTTTTGTTTAACTGACTATGTCTATGTATATATACAGTAGGCAATATTGATGACTCTGAGAAACTTCGTCCCGAGGAACTAAACCAACAAACTATTGAAGCTTTGGTTGCCGAAAATAACTTGGTACTTCTTGAAACTACATATTCTGTATTATTTTGCAGTTTTGCTCTTCTCCTAGGAGAAATAATTGCTGCTATCTGTTTTTCTTGATGGGATTCCATTTAGTTGTATATATGATGATCATAAATGTAAAACAAAGATCTTGCCTTTTTCCTATACTGCCTTATGCACTAAATGGATGGTAATGTGTTTATTCTTGACTCCTACAGTATTAGGCTGAAATATAATTAAATTTTCAGAAATATAATGGCAAGAAAGGTACTTCTGGCTAGGAGGCCCATTATGGTAGCTATTGAATAACAGCCAATAATTTAATGAGCGACATCTCTATCTGGTCCCATTACACTTCACCATATGAGCTTTTTACAATAATAGCCTGAGACTAACAGTGGTACTGTGAAACAAGGACTATTTAATTGTCTTAGTTGGGTTTGTGGGTCTGGAATTCCTGATTTTGTTCTATAGATTCTTTGGATAGCTTCTTACATCCTTCTTTTTTTAAAAAAAAATATTAGAGTAACAATATAAGCTTCATGACACAAATCTTGTTTCCAGAAAATGGAGATTCTTCCAGTTGATGACTTGGACATTGCATTGCATGATTTTGTGAGCAAGGATGACAAGATGGCGTTTTATGCCTGTTTGCAGCGGAATCTTGAAGAAACCAGAGTATGCTTTGCTACATTTTCTATTGTTGGTTTTAGTTCTTTTTTTTTATCAAAGGGCCGTAGTTCTCCATTTCCATTAATAGAAATGAGACTAGAATACAGAGGTAGCCTTTTTTAGTTCTTATTTGATTGCTTGCTGCCTGATAAAATTGCATGCATCTAAAATTGAAATCCTTTGTTGAAACCTGCAGACTAAATTGAATTCGGAGGCAGATAAATTTAAAATAGAGGAAGAAGATATAATAGTCAAAGTTGGCGAGTGCATGCAGGTATTTGGAGCAATCTACTATTGTTCCTATGAGGTTGTGGGGTGATTAAAAGGTTAATATTTTTAACTACTTAGGAACGTGTGAAGGAAAGGTCCCTCCGCTCCAAGGAAGATTCACGGTTCACGTCAAGCTCTCAAAACTTGGTGGTTTCAATGTCCTTATGCCCTTAATGTTGTATGCCATTTTTTCATTGTTGCTGATTGTTTGTTGCTCTTATGATACTTGACCAGGATACTGGAGGTAGATCTGTTACAGCTCAAAGTAACCTGAACTCTTTCAGTGATGATGAAGACACCAGGGAGATGCTTCTCGGTGCAAGAACAACTAATGCTGGAAGGAAAGCATCTGGATTTACAAGACCCTCTAAAGATGCTACCGATGTTGCCAAAACTGGAACTTCCAGAAGGGGCAGGGGAAGAGGGACGGCCTCAATGAAGCAGACCACTCTGAATTTCAGCCAATCAAGGTTATTAAATTAATTGCTACCTTGCATTTATACCATAACTGTGCAACCTATGCCAAAATGGAATAGCCATGGTACAGTCTAATTTGCATTTTGAGTGTTAAAGGTGTTTGAAATCGTGTGCCCTGGTTTTAACTCTGCAGTAGGTGCTCCAATGCTAATTTTACCATCCAATATTTTGCAGGTCAAGTGCTGCTATCCGCAGTGAGGAAGTGCAATCTTCTTCAGATGAGGAAAATGAGACTAATGAAGCAAACGAAGTTGTTGAATCTTCAGTATGATCATTTCCTCTATTTGTAGTTATGTACTTTTTCTGTATTAATACGCATAAATATAATGTGCGCTTTTGCTCGTGGCAAATGACCTGGTGAACTGAAACATTGTATATTCTTGAATACTCACAGGAACCGGAGGAGAGTCCCCAACAAACTGGACGGAAAAGGGCAGCTCCTAGAGGTGGTAGAGGTAGGGGTAGAGGCGCTACTGCAAAAAGGGGTAGAAAAGCAGATATTTCATCCATCCAGAGCATGCTGATGAGCAAAGATGATGATGACGATGATGAAGATGACAGGCCGAAGAAACCTCCACCTCGGGTAAGTGAATCACCTTGACATTTTGTCAGTTTGACGGGTCTTCTTGTGGTTTGTCATTAAATTGTTTGCATTGTGTTGTGTACACGCACTGATACTACAAACCGTTGGTTTTACGACATACAAACTGTTTTTTTTTTAGAATACGACCTACAAACTGTTGGTTTTACGACTTTGTGTTACTCTGCAGGTCACTAGGAACTACGGAGCTGTTAGGAGGAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017204