Os07g0103500

From RiceWiki
Revision as of 08:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0103500| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001065225.1 GI:115470182 GeneID:4342182| Length = 5766 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0103500

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001065225.1 GI:115470182 GeneID:4342182

Length

5766 bp

Definition

Oryza sativa Japonica Group Os07g0103500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:212778..218543

Sequence Coding Region

217214..218239

Expression

GEO Profiles:Os07g0103500

Genome Context

<gbrowseImage1> name=NC_008400:212778..218543 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:212778..218543 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggagcacgactacgactccaactcgaacccgccgttgatgagcacgtacaagcacctgttcgtggagcagcaccgcctggacatggacatgggcgccatcgacgtcgacgagtgcgagctccctgtgatcgacctcgcggggctcatggaggcggagcaggtgtgccgcgcagacatggtgcgtgcggcgtcggaatggggcttcttccaggtgaccaaccacggcgtgccgcaggcgctgctgcgcgagctgcacgacgcacaggtggccgtgttccggcggcccttccaggagaaggtgaccgagaggctgctcggcttctcgccggagagctaccggtggggaacgccgacggccaagtgcctggagcagctgtcgtggtcggaggcctatcacatcccaatgacgacgcccaggcccagcacgagcatcagggccagggcggtgatcgaggaggtgtcgagggcgatgtacgagctggcgcagaagctggcagagatcctgatgagagggctgccgggcgccggcgagggcgagacgatggtgacgacgcgggaggagacgtgcttcctgcggctgaaccggtacccaccgtgcgccatggccatggggggcttcgggctgtgcccgcacacggacagcgacttgctcaccatcgtgcaccagcagcaggacaccgtcggcggcctccagctgctcaagggcggcaggtgggtggccgtgaagcccagccccagcaccctcatcgtcaacgtcggcgacctcctgcaggcgtggagcaacgatgtgtacaagagcgtggagcacagggtgatggccaacgccacgctggagcgcttctccatggccttcttcctctgcccctcctaccacacgctcatcatcccaagcagcagccatgtccacgacgacgatgcccattaccggagcttcaccttcggcgagtacaggaagcagatcatggaggacgtcaggagcacaggccgcaagattggactgcaccgctttcgaacccgatag</cdnaseq>

Protein Sequence

<aaseq>MEEHDYDSNSNPPLMSTYKHLFVEQHRLDMDMGAIDVDECELPV IDLAGLMEAEQVCRADMVRAASEWGFFQVTNHGVPQALLRELHDAQVAVFRRPFQEKV TERLLGFSPESYRWGTPTAKCLEQLSWSEAYHIPMTTPRPSTSIRARAVIEEVSRAMY ELAQKLAEILMRGLPGAGEGETMVTTREETCFLRLNRYPPCAMAMGGFGLCPHTDSDL LTIVHQQQDTVGGLQLLKGGRWVAVKPSPSTLIVNVGDLLQAWSNDVYKSVEHRVMAN ATLERFSMAFFLCPSYHTLIIPSSSHVHDDDAHYRSFTFGEYRKQIMEDVRSTGRKIG LHRFRTR</aaseq>

Gene Sequence

<dnaseqindica>4437..5462#cttccactgtgttcctaattccttccctgcaattattggttgctgcttcacttgatcttattggcaaccagctagctaagcttatacacacccacggccagacctgaaccttctacctactaccgcacaaaaacaacaagctacctagctctctaacaacaatctcatttgcatgaatcgcaggagatcgatagtagctactagttagcaagttcatatatagatcgatctatgatcgatgctagctagctaatagtatcatcgatcgggaaaacagacacaaattagagctagctagagcccccgccggccgggtcgacgtactgctgctaatcaatagccaggtttgtttgatcgatactaattaacccattaacatctatctctgcaagtttattgatctgtgatccctgcagtacgctagctagtagttaattgtttcttccatgcattcatgtttaattttccagctcttcaattctgcacatacggtatatatatagacaagtctagctagctatacatgcatgaatgcatcaaccaattaatttaattttgcacctcctgacaatatattgttttaattctgcacctgaatgcatgcatcgacaatatatacgtactccgtacgagtacgattgatagatcatgaactataaaattaataatatgcatcgcgcccctgaaaaaaagaaaattaacatgcatcacatatacatatacataaaagttagttagtcaggaatggttactggcccttgatcagtacgtaacaacaacgaaactgagactcgatcatcttgttgctaggctcgagcgagtatacagtacatgcatgtggattaattgagaacaagaacatactattggagacagaaagtattttctacatctagatgccatacaacaatcaatcttaattagtggagtacaattttactcagtcgagccgcatgcacatggcatgcaggagccaggagcgagtcgatcagctagctagctagccagcacattcatgatcatgtgctgcaaaacactactgcatactcctatgccgccaataatcttgttattactccttgcaatcgatcgttaaccccactgccacccccatcttttcttcttatgtgcatgctgtccttgattagtctacatgcatgtaatttcctatgaattctctcaagttcatcatgtctacagtctacccaagaaaaaataaagccttaagttcatcatgaatttttttttgagaaaaactgatgatttggtacaagattaatctaaatataccaattttaggatcaaattcaacacacatattgagggaaaaatgacaaatctaacctatttgcaccattcattaccgttttgtttctctctttttctcttaatttgtaggatgagtttagacatgatttttttaatttcattattatctatttttttcattttgttcagaatttttcatgattaattgttttattgtatttgagaaatgatagaatacacatgcgagatatacagtcgggaggaaggagaacccccctccagctgggtttgattttcttgacctagaaaaactaggggatcgaggcccccctaagtaggtaattttccattaaacagggataatgttaatttattgcgctcaattggttttgcatgtttgttgagttttttttgggatctatagtttttggaacttaattaaatcacaataattatttattttttctgaaataaaagatgacattgaaacaagcattgttcctaggttaattaatttatatataggtccagaattccatttttttttgatatagtgtttgtgcttccttaggagaattttttttaaaaaaattgaccactttgtttttttttgctagaatatttaatttgttttatgagttcacaacttttttgtttgagttgcaaaattgaacaagacgtacatgcattagacttttgatcgacaatttttctttgtcaaaggacgaagggtgtatatatatatatatatatatacatatacatatatatatacatatatgtacatatgtatatatatatacatatatgtacatatgtatacatatatatatgtatatatgtatatatatgtatatatacatatatatgtatatatatgtacgtatatatatatatatacatatatacatatatatatatatatacatatatatatatatacatatatatatatatatatatatgttcggccttatgcagatgccaataattttgtcctgggatatcaatgctgagttgcttataaaaaatatttgtaaaaagcttaatattacacacatatatagctagtcttaatttgtttcatataaaagctgataaagctaagatagctatatcgaaattagactttggttagtagttgttaacgaaagtagagagaagctaggggatacattagcatatggtcgatcaattttcagttagcatgcaactgtgctggttttaattaaaagagtaactattcatatgattaattgtaattaatatatatgctggcgcttgtgttatttcaagtgctctagctaagcgaagatcatcgatctgataatggccagaaatgcaagtacatcgtttacccttatttgaagtaaattgtgggatccctagcatgttacgcctaataatgtcttctgttggatatggatgtgttactagctcttacaggcttaggataatattaatatatattgatgttcatagattggtttgatgcatgagtactatatatatatatgcacgtttcctgacgacgacaagacaagagaattattgatatattgagccaagatcgatgtgaatatatactacattggtgatggtagtatcccatatgcatgcatatgcttggtgaatctcaatgtagatatatataagttggtaattaaatgtgtattatattcgatcgtacgtgatcacatgaacgcatgacaaggtattattgatcactagtatagatcggcgaaaagtccaaaaaaactaggactagttaacgcatgtaacaatgcaagtagtcgtctgcttgggagcagctgcatgacctgatcgatgatcagacaaaacaattttggaaagtatatgcaggtgtaattttatttgaaagcagtatcgatcagacaaaagaatcgccgttgattctgggagcgttcgcctacaacgatcgtcttgttcttgtgacgttatgcctatgaaaacacacttgggatattcacatattctggtagtgattattgtatattcctacattttctttagaaaataatagaagtttttatttaactcagctaattatatcaagatgatacaaaaccactaacacacttatgacctctatataactatataactatgatgcacacaaccaaaacacacacacatccaaaagtttacaagaaaaggaagcagatgaagtattacgaaccatcacttctaagattagatcgccacccatatttttgagtaaaagaatttccttggccgcttagtctaagcatagacaccccacaataaccaaattccacgaacccaattttttaagtataactcaattgtgcaactaatggataattaagtaaacaacatacaaaagagaaaaaataattttctgtaaaaaccaatatcatttttgcatgactaaagggacaaaaacagcagtcgttcctaacggaacatatggttgcaaatttttttgaactctccaaagccaacaagtaaacttgtataaaatactatatatgttgtggagtaattcttgatgcgacatatatgatagactagactaagttagcaaaacagcaatcaaagaacatgtgtttaattatctttttgttgtgataaaagcaataattttgattgccttgccaactacgtttacatagattgttgttggttagcacaactccacgacgaaggtagcaaagagaaatcttaaccttatgtggcacctttaatttagactgctgcagcttctctagaggaacagtggaagctgcaagctagtagaagactaatggtattgttggtgctaagcagcagctgccataactagctaaagcgaactatgaactagtgccacgtagtgagttctcacattaaactattcagcggtgtcaaattccatcgaaacttattttgctccgattaattagttgtatatttattttgacgtatacgacacatcatgtttatttaattttgacgtataggatgatacaaagaacaagagaattaacatcatatggattcatgcaagttcgccgcatgcatttttctaagcagtttaattaattttgtcagaaatgaggaataatagtaatttcttttggtaacccagcacaagacgtgggaattgattaaggcgcatgcaggcagggcggagttaataattaatggaggagcacgactacgactccaactcgaacccgccgttgatgagcacgtacaagcacctgttcgtggagcagcaccgcctggacatggacatgggcgccatcgacgtcgacgagtgcgagctccctgtgatcgacctcgcggggctcatggaggcggagcaggtgtgccgcgcagacatggtgcgtgcggcgtcggaatggggcttcttccaggtgaccaaccacggcgtgccgcaggcgctgctgcgcgagctgcacgacgcacaggtggccgtgttccggcggcccttccaggagaaggtgaccgagaggctgctcggcttctcgccggagagctaccggtggggaacgccgacggccaagtgcctggagcagctgtcgtggtcggaggcctatcacatcccaatgacgacgcccaggcccagcacgagcatcagggccagggcggtgatcgaggaggtgtcgagggcgatgtacgagctggcgcagaagctggcagagatcctgatgagagggctgccgggcgccggcgagggcgagacgatggtgacgacgcgggaggagacgtgcttcctgcggctgaaccggtacccaccgtgcgccatggccatggggggcttcgggctgtgcccgcacacggacagcgacttgctcaccatcgtgcaccagcagcaggacaccgtcggcggcctccagctgctcaagggcggcaggtgggtggccgtgaagcccagccccagcaccctcatcgtcaacgtcggcgacctcctgcaggcgtggagcaacgatgtgtacaagagcgtggagcacagggtgatggccaacgccacgctggagcgcttctccatggccttcttcctctgcccctcctaccacacgctcatcatcccaagcagcagccatgtccacgacgacgatgcccattaccggagcttcaccttcggcgagtacaggaagcagatcatggaggacgtcaggagcacaggccgcaagattggactgcaccgctttcgaacccgatagatagatccacctgacctacatacccgccctactcctactatatatatcaaatcaccactgctataatgcattatactcgatccactatgcatttttcatcgccacaatatgcatgtacctagccaataattaattaagctgcactttgcttacttattgctagcttgctactgcatcgatctatatgcatgtacacacatttcattgccttagcagtgtatgtatatgcattattttttccttatttgcccttagcttgcagatttcatagcagctaatatatatccgtcggaattatttgaac</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0103500, RefSeq:Os07g0103500