Difference between revisions of "Main Page"
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{|border="0" cellspacing="0" cellpadding="0" style="margin:1em 0; background:transparent; width:100%;" | {|border="0" cellspacing="0" cellpadding="0" style="margin:1em 0; background:transparent; width:100%;" | ||
|- | |- | ||
| + | <!-----------------Chinese----------------------> | ||
| + | |style="padding:0px 2px;"| | ||
| + | |valign="top" style="border:1px solid #ACD6FF; background-color:transparent;width:33.3%"| | ||
| + | <div style="background:#ACD6FF; border-bottom:1px solid #ACD6FF; padding:0.2em 0.5em; text-align:center;font-size:135%; font-weight:bold;">[http://bigd.big.ac.cn/databasecommons'''Database Commons'''] </div> | ||
| + | <div style="font-size:105%;text-align:center;"> | ||
| + | A catalog of biological databases<br><br> | ||
| + | </div> | ||
| + | |style="padding:0px 2px;"| | ||
| + | |valign="top" style="border:1px solid #ACD6FF; background-color:transparent;width:33.3%"| | ||
| + | <div style="background:#ACD6FF; border-bottom:1px solid #ACD6FF; padding:0.2em 0.5em; text-align:center;font-size:135%; font-weight:bold;">[http://icg.big.ac.cn '''ICG'''] </div> | ||
| + | <div style="font-size:105%;text-align:center;"> | ||
| + | A knowledgebase of Internal Control Genes for RT-qPCR normalization<br><br> | ||
| + | </div> | ||
| + | |style="padding:0px 2px;"| | ||
<!-----------English------------> | <!-----------English------------> | ||
| − | |valign="top" style="border:1px solid #ACD6FF; background-color:transparent; | + | |valign="top" style="border:1px solid #ACD6FF; background-color:transparent;"| |
<div style="background:#ACD6FF; border-bottom:1px solid #ACD6FF; padding:0.2em 0.5em; font-size:135%;text-align:center; font-weight:bold;">[http://lncrna.big.ac.cn/index.php/Main_Page '''LncRNAWiki''']</div> | <div style="background:#ACD6FF; border-bottom:1px solid #ACD6FF; padding:0.2em 0.5em; font-size:135%;text-align:center; font-weight:bold;">[http://lncrna.big.ac.cn/index.php/Main_Page '''LncRNAWiki''']</div> | ||
<div style="font-size:105%;text-align:center;"> | <div style="font-size:105%;text-align:center;"> | ||
| − | A wiki-based database for community curation of human long non-coding RNAs | + | A wiki-based database for community curation of human long non-coding RNAs<br><br> |
</div> | </div> | ||
| + | |} | ||
| + | |||
| + | <!---------------Featured Research-----------------> | ||
| + | {|border="0" cellspacing="0" cellpadding="0" style="margin:1em 0; background:transparent; width:100%;" | ||
| + | |- | ||
<!-----------------Chinese----------------------> | <!-----------------Chinese----------------------> | ||
|style="padding:0px 2px;"| | |style="padding:0px 2px;"| | ||
| − | |valign="top" style="border:1px solid #ACD6FF; background-color:transparent;"| | + | |valign="top" style="border:1px solid #ACD6FF; background-color:transparent;width:33.3%"| |
<div style="background:#ACD6FF; border-bottom:1px solid #ACD6FF; padding:0.2em 0.5em; text-align:center;font-size:135%; font-weight:bold;">[http://wiki.ic4r.org/index.php/Main_Page '''RiceWiki'''] </div> | <div style="background:#ACD6FF; border-bottom:1px solid #ACD6FF; padding:0.2em 0.5em; text-align:center;font-size:135%; font-weight:bold;">[http://wiki.ic4r.org/index.php/Main_Page '''RiceWiki'''] </div> | ||
| − | <div style="font-size:105%;"> | + | <div style="font-size:105%;text-align:center;"> |
| − | A community-curated knowledgebase for the rice research community | + | A community-curated knowledgebase for the rice research community<br><br> |
</div> | </div> | ||
|style="padding:0px 2px;"| | |style="padding:0px 2px;"| | ||
| − | |valign="top" style="border:1px solid #ACD6FF; background-color:transparent;"| | + | |valign="top" style="border:1px solid #ACD6FF; background-color:transparent;width:33.3%"| |
| − | <div style="background:#ACD6FF; border-bottom:1px solid #ACD6FF; padding:0.2em 0.5em; text-align:center;font-size:135%; font-weight:bold;">[http:// | + | <div style="background:#ACD6FF; border-bottom:1px solid #ACD6FF; padding:0.2em 0.5em; text-align:center;font-size:135%; font-weight:bold;">[http://wikicell.big.ac.cn '''WikiCell'''] </div> |
| − | <div style="font-size:105%;"> | + | <div style="font-size:105%;text-align:center;"> |
| − | A portal for a unified view of the human transcriptome | + | A portal for a unified view of the human transcriptome<br><br> |
</div> | </div> | ||
|style="padding:0px 2px;"| | |style="padding:0px 2px;"| | ||
|valign="top" style="border:1px solid #ACD6FF; background-color:transparent;"| | |valign="top" style="border:1px solid #ACD6FF; background-color:transparent;"| | ||
| − | <div style="background:#ACD6FF; border-bottom:1px solid #ACD6FF; padding:0.2em 0.5em; text-align:center;font-size:135%; font-weight:bold;">[http:// | + | <div style="background:#ACD6FF; border-bottom:1px solid #ACD6FF; padding:0.2em 0.5em; text-align:center;font-size:135%; font-weight:bold;">[http://esnd.big.ac.cn/index.php/Main_Page '''ESND'''] </div> |
| − | <div style="font-size:105%;"> | + | <div style="font-size:105%;text-align:center;"> |
| − | A wiki-based English-to-Chinese Scientific Nomenclature Dictionary | + | A wiki-based English-to-Chinese Scientific Nomenclature Dictionary<br><br> |
</div> | </div> | ||
|} | |} | ||
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==Publications== | ==Publications== | ||
<div style="padding:0.5em 1em;font-size:110%"> | <div style="padding:0.5em 1em;font-size:110%"> | ||
| − | *'''LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs.''' ''Nucleic Acids Research''(2015), 43:D187-92. [http://www.ncbi.nlm.nih.gov/pubmed/25399417 PMID=25399417] | + | *'''ICG: a wiki-driven knowledgebase of internal control genes for RT-qPCR normalization.''' ''Nucleic Acids Research'' (2018), 46(D1):D121-D126. [http://www.ncbi.nlm.nih.gov/pubmed/29036693 PMID=29036693] |
| + | *'''LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs.''' ''Nucleic Acids Research'' (2015), 43:D187-92. [http://www.ncbi.nlm.nih.gov/pubmed/25399417 PMID=25399417] | ||
*'''RiceWiki: a wiki-based database for community curation of rice genes.''' ''Nucleic Acids Research'' (2014), 42(Database issue):D1222-1228. [http://www.ncbi.nlm.nih.gov/pubmed/24136999 PMID=24136999] | *'''RiceWiki: a wiki-based database for community curation of rice genes.''' ''Nucleic Acids Research'' (2014), 42(Database issue):D1222-1228. [http://www.ncbi.nlm.nih.gov/pubmed/24136999 PMID=24136999] | ||
*'''WikiCell: a unified resource platform for human transcriptomics research.''' ''Omics: a journal of integrative biology'' (2012),16.6:357-362. [http://www.ncbi.nlm.nih.gov/pubmed/22702248 PMID=22702248] | *'''WikiCell: a unified resource platform for human transcriptomics research.''' ''Omics: a journal of integrative biology'' (2012),16.6:357-362. [http://www.ncbi.nlm.nih.gov/pubmed/22702248 PMID=22702248] | ||
Latest revision as of 11:26, 26 December 2018
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Welcome to ScienceWikis
Contribute your efforts, further our knowledge.
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ScienceWikis is a catalog of biological knowledge wikis and wiki extensions, aiming to exploit the full potential of wiki technology to harness community intelligence in knowledge integration and curation.
Purpose & Aims
- Build professional academic wikis for biological knowledge integration and curation (such as, wiki-based gene annotation system).
- Measure users' contributions, give explicit authorship and provide a standard practice to reward community-curated efforts in bio-wikis.
- Provide a central archive of quantitative contributions and citations in different bio-wikis.
- Develop wiki extensions to facilitate biological content creation and editing, data visualization, exchange and sharing.
Biological Wikis
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A catalog of biological databases |
A knowledgebase of Internal Control Genes for RT-qPCR normalization |
A wiki-based database for community curation of human long non-coding RNAs |
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A community-curated knowledgebase for the rice research community |
A portal for a unified view of the human transcriptome |
A wiki-based English-to-Chinese Scientific Nomenclature Dictionary |
Wiki extensions
Wiki extensions to facilitate biological content creation and editing, data visualization, exchange and sharing through a variety of e-utility methods.
AuthorReward
- Description: A wiki extension to provide a standard practice to reward community-curated efforts in bio-wikis through contribution quantification and explicit authorship.
- Reference: AuthorReward: increasing community curation in biological knowledge wikis through automated authorship quantification, Bioinformatics, 2013, 29(14):1837-1839.
- Availability: http://code.google.com/p/authorreward, http://www.mediawiki.org/wiki/Extension:AuthorReward
LiMi
- Description: literature mining in aid of gene annotation in biological knowledge wikis.
ColSeq
- Description: color molecular sequence according to sequence features.
Publications
- ICG: a wiki-driven knowledgebase of internal control genes for RT-qPCR normalization. Nucleic Acids Research (2018), 46(D1):D121-D126. PMID=29036693
- LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs. Nucleic Acids Research (2015), 43:D187-92. PMID=25399417
- RiceWiki: a wiki-based database for community curation of rice genes. Nucleic Acids Research (2014), 42(Database issue):D1222-1228. PMID=24136999
- WikiCell: a unified resource platform for human transcriptomics research. Omics: a journal of integrative biology (2012),16.6:357-362. PMID=22702248
- Community intelligence in knowledge curation: an application to managing scientific nomenclature. PloS one (2013), 8.2:e56961.PMID=23451119
- AuthorReward: increasing community curation in biological knowledge wikis through automated authorship quantification. Bioinformatics (2013), 29(14):1837-1839.PMID=23732274]
