Tips
- Browse the database by Factors: Clicking the “Search” button, you will browse the corresponding datasets in the ChIP-seq database. You can limit the search scope by using advanced search function (e.g. Factors class, Factors, Cell types etc.)
- Visualization: Tick the dataset of interest in the table, enter a gene name or genome cordinate, then click “Go to WashU Epigenome Browser” for visualizing the selected data.
Factors class
Factors
Cell type
Senescence type
Species
Visualization
Selected 0 datasets
Species | Cell Type | Senescence Type | Factor | Technology | GEO | Doi | Publication | |
|---|---|---|---|---|---|---|---|---|
| Homo sapiens | Human mesenchymal progenitor cells | induced senescence | H3K4me3 | WRN -/- EP vs WRN -/- LP vs LMNA G608G/+ EP vs LMNA G608G/+ LP vs LMNA G608G/G608G EP vs LMNA G608G/G608G LP vs WT EP vs WT LP | The paper with the data has not yet been published. | |||
| Homo sapiens | Human fetal lung fibroblats (Uninduced Proliferative) | oncogene-induced senenscence | H3K9me3 | OISD0 vs OISD2 vs OISD6 vs OIS D10 | GSE130306 | 10.1016/j.molcel.2020.03.007 | 4D Genome Rewiring During Oncogene-Induced and Replicative Senescence | |
| Homo sapiens | Human mesenchymal progenitor cells | induced senescence | H3K9me3 | WT vs BMAL1 KO | The paper with the data has not yet been published. | BMAL1 moonlighting as a gatekeeper for LINE1 repression and cellular senescence in primates | ||
| Homo sapiens | Human mesenchymal progenitor cells | alleviated senescence | ATAC-seq | WT vs APOE KO | The paper with the data has not yet been published. | Destabilizing heterochromatin by APOE mediates senescence | ||
| Homo sapiens | Human mesenchymal progenitor cells | alleviated senescence | DamID-seq | WT vs APOE KO | The paper with the data has not yet been published. | Destabilizing heterochromatin by APOE mediates senescence |