| 项目编号 | PRJCA001524 | ||||||||||||||||||||
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| 项目标题 | The whole genome sequencing of tung tree (Vernicia Fordii) | ||||||||||||||||||||
| 涉及领域 | Agricultural | ||||||||||||||||||||
| 数据类型 |
Whole genome sequencing
Genome sequencing and assembly Raw sequence reads Genome sequencing |
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| 物种名称 | Vernicia fordii | ||||||||||||||||||||
| 描述信息 | Tung tree (Vernicia fordii), a woody oil plant native to China a, is widely distributed in the subtropical area. As an oil crop, economic traits involved in fatty acid biosynthesis and oil accumulation are the targets of improved breeding efficiency for tung tree. However, identification of important genes, gene families and marker loci associated with oil content, fatty acid composition, and fruit yield has been hampered due to a lack of genetic and genomic information. The objective of this project is to obtain the whole genome sequence information and provide valuable resources for molecular breeding and genetic improvement of tung tree. A high-quality, chromosome-scale tung tree genome sequence of 1.12 Gb with 28,422 predicted genes and over 73% repeat sequences were achieved. Tung tree genome was assembled by combining Illumina short reads, PacBio single-molecule real-time long reads and Hi-C sequencing data. | ||||||||||||||||||||
| 样品范围 | plant leaves | ||||||||||||||||||||
| 发布日期 | 2019-06-23 | ||||||||||||||||||||
| 出版信息 |
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| 项目资金来源 |
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| 提交者 | Lin Zhang (triwoodtim918@126.com) | ||||||||||||||||||||
| 提交单位 | Central South University of Forestry and Technology | ||||||||||||||||||||
| 提交日期 | 2019-06-21 |