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CRA001732 Information
Title: The whole genome sequencing of tung tree (Vernicia Fordii)
BioProject: PRJCA001524 /
Release date: 2019-07-02
Files: 82
File size: 350.18 GB
Publication
Journal name
Genomics, Proteomics & Bioinformatics
Year
2019
DOI
10.1016/j.gpb.2019.03.006
PubMed ID
32224189

Journal name
PeerJ
Year
2022
DOI
10.7717/peerj.14416
PubMed ID

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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX051460 Pacbio_data Vernicia fordii PacBio RS II SAMC071698
Run accession Run alias Run data file information
CRR057096 Pacbio_R1 File: CRR057096.fastq.gz
CRR057097 Pacbio_R2 File: CRR057097.fastq.gz
CRX051459 15kb_for_WGS Vernicia fordii Illumina HiSeq 2500 SAMC071698
Run accession Run alias Run data file information
CRR057091 15kb_R1 File: CRR057091_f1.fastq.gz
File: CRR057091_r2.fastq.gz
CRR057092 15kb_R2 File: CRR057092_f1.fastq.gz
File: CRR057092_r2.fastq.gz
CRR057093 15kb_R3 File: CRR057093_f1.fastq.gz
File: CRR057093_r2.fastq.gz
CRR057094 15kb_R4 File: CRR057094_f1.fastq.gz
File: CRR057094_r2.fastq.gz
CRR057095 15kb_R5 File: CRR057095_f1.fastq.gz
File: CRR057095_r2.fastq.gz
CRX051458 10kb_for_WGS Vernicia fordii Illumina HiSeq 2500 SAMC071698
Run accession Run alias Run data file information
CRR057086 10kb_R1 File: CRR057086_f1.fastq.gz
File: CRR057086_r2.fastq.gz
CRR057087 10kb_R2 File: CRR057087_f1.fastq.gz
File: CRR057087_r2.fastq.gz
CRR057088 10kb_R3 File: CRR057088_f1.fastq.gz
File: CRR057088_r2.fastq.gz
CRR057089 10kb_R4 File: CRR057089_f1.fastq.gz
File: CRR057089_r2.fastq.gz
CRR057090 10kb_R5 File: CRR057090_f1.fastq.gz
File: CRR057090_r2.fastq.gz
CRX051457 3kb_for_WGS Vernicia fordii Illumina HiSeq 2500 SAMC071698
Run accession Run alias Run data file information
CRR057081 3kb_R1 File: CRR057081_f1.fastq.gz
File: CRR057081_r2.fastq.gz
CRR057082 3kb_R2 File: CRR057082_f1.fastq.gz
File: CRR057082_r2.fastq.gz
CRR057083 3kb_R3 File: CRR057083_f1.fastq.gz
File: CRR057083_r2.fastq.gz
CRR057084 3kb_R4 File: CRR057084_f1.fastq.gz
File: CRR057084_r2.fastq.gz
CRR057085 3kb_R5 File: CRR057085_f1.fastq.gz
File: CRR057085_r2.fastq.gz
CRX051456 800bp_for_WGS Vernicia fordii Illumina HiSeq 2500 SAMC071698
Run accession Run alias Run data file information
CRR057080 800bp File: CRR057080_f1.fastq.gz
File: CRR057080_r2.fastq.gz
CRX051455 500bp_for_WGS Vernicia fordii Illumina HiSeq 2500 SAMC071698
Run accession Run alias Run data file information
CRR057079 500bp File: CRR057079_f1.fastq.gz
File: CRR057079_r2.fastq.gz
CRX051454 180bp_for_WGS Vernicia fordii Illumina HiSeq 2500 SAMC071698
Run accession Run alias Run data file information
CRR057078 180bp File: CRR057078_f1.fastq.gz
File: CRR057078_r2.fastq.gz
CRX051453 Putaotong Vernicia fordii Illumina HiSeq 2500 SAMC071697
Run accession Run alias Run data file information
CRR057077 Hi-C File: CRR057077_f1.fastq.gz
File: CRR057077_r2.fastq.gz
CRX051452 YT17-1024 Vernicia fordii Illumina HiSeq 2000 SAMC071696
Run accession Run alias Run data file information
CRR057074 VfSeed_30WAF_R1 File: CRR057074_f1.fastq.gz
File: CRR057074_r2.fastq.gz
CRR057075 VfSeed_30WAF_R2 File: CRR057075_f1.fastq.gz
File: CRR057075_r2.fastq.gz
CRR057076 VfSeed_30WAF_R3 File: CRR057076_f1.fastq.gz
File: CRR057076_r2.fastq.gz
CRX051451 YT17-0926 Vernicia fordii Illumina HiSeq 2000 SAMC071695
Run accession Run alias Run data file information
CRR057071 VfSeed_25WAF_R1 File: CRR057071_f1.fastq.gz
File: CRR057071_r2.fastq.gz
CRR057072 VfSeed_25WAF_R2 File: CRR057072_f1.fastq.gz
File: CRR057072_r2.fastq.gz
CRR057073 VfSeed_25WAF_R3 File: CRR057073_f1.fastq.gz
File: CRR057073_r2.fastq.gz
CRX051450 YT17-0831 Vernicia fordii Illumina HiSeq 2000 SAMC071694
Run accession Run alias Run data file information
CRR057068 VfSeed_20WAF_R1 File: CRR057068_f1.fastq.gz
File: CRR057068_r2.fastq.gz
CRR057069 VfSeed_20WAF_R2 File: CRR057069_f1.fastq.gz
File: CRR057069_r2.fastq.gz
CRR057070 VfSeed_20WAF_R3 File: CRR057070_f1.fastq.gz
File: CRR057070_r2.fastq.gz
CRX051449 YT16-0717 Vernicia fordii Illumina HiSeq 2000 SAMC071693
Run accession Run alias Run data file information
CRR057065 VfSeed_15WAF_R1 File: CRR057065_f1.fastq.gz
File: CRR057065_r2.fastq.gz
CRR057066 VfSeed_15WAF_R2 File: CRR057066_f1.fastq.gz
File: CRR057066_r2.fastq.gz
CRR057067 VfSeed_15WAF_R3 File: CRR057067_f1.fastq.gz
File: CRR057067_r2.fastq.gz
CRX051448 YT17-0608 Vernicia fordii Illumina HiSeq 2000 SAMC071692
Run accession Run alias Run data file information
CRR057062 VfSeed_10WAF_R1 File: CRR057062_f1.fastq.gz
File: CRR057062_r2.fastq.gz
CRR057063 VfSeed_10WAF_R2 File: CRR057063_f1.fastq.gz
File: CRR057063_r2.fastq.gz
CRR057064 VfSeed_10WAF_R3 File: CRR057064_f1.fastq.gz
File: CRR057064_r2.fastq.gz
CRX051447 VF-X Vernicia fordii Illumina HiSeq 2000 SAMC071691
Run accession Run alias Run data file information
CRR057061 VfMF File: CRR057061_f1.fastq.gz
File: CRR057061_r2.fastq.gz
CRX051446 VF-C Vernicia fordii Illumina HiSeq 2000 SAMC071690
Run accession Run alias Run data file information
CRR057060 VfFF File: CRR057060_f1.fastq.gz
File: CRR057060_r2.fastq.gz
CRX051445 VF-L Vernicia fordii Illumina HiSeq 2000 SAMC071689
Run accession Run alias Run data file information
CRR057059 VfF File: CRR057059_f1.fastq.gz
File: CRR057059_r2.fastq.gz
CRX051444 VF-Y Vernicia fordii Illumina HiSeq 2000 SAMC071688
Run accession Run alias Run data file information
CRR057058 VfL File: CRR057058_f1.fastq.gz
File: CRR057058_r2.fastq.gz
CRX051443 VF-J Vernicia fordii Illumina HiSeq 2000 SAMC071687
Run accession Run alias Run data file information
CRR057057 VfST File: CRR057057_f1.fastq.gz
File: CRR057057_r2.fastq.gz
CRX051442 VF-YG Vernicia fordii Illumina HiSeq 2000 SAMC071686
Run accession Run alias Run data file information
CRR057056 VfR File: CRR057056_f1.fastq.gz
File: CRR057056_r2.fastq.gz
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Submitter:Lin Zhang (triwoodtim918@126.com)
Organization:Central South University of Forestry and Technology
Date submitted:2019-06-24