Accession SAMC1474681
Accession in Other Database GSA-Human: HRS095122
Sample name PBM_IgAN_12_063
Title monocytes
Sample type Human sample
Organism Homo sapiens
Description polyA RNA
Attributes *This sample record contains additional controlled-access information that is avaiable from GSA-Human by requesting study HRA000342 in the GSA-Human system.
Release date 2021-01-20
BioProject Accession PRJCA003506
Submitter Ping  Lu  (tangfuchou@pku.edu.cn)
Organization Peking University
Submission date 2023-06-18

Sample Data

Resource name Description
GSA-Human (1) -
HRA000342  (Controlled Access) IgA nephropathy represents the most prevalent chronic nephrosis worldwide. However, pathogenesis about IgA deposition and end-stage renal failure is still not well defined. Using single-cell RNA-seq, we identified the mesangial membrane receptor for IgA, which collaborates with increased extracellular matrix proteins and protease inhibitor to facilitate IgA deposition. Meanwhile, cell-cell interaction analysis revealed increased communications between mesangium and other cell types, uncovering how morbidity inside glomerulus spreads to whole kidney, which results in the genetic changes of kidney resident immune cells. Prominent interaction decreasing in intercalated cells leads to the discovery of a transitional cell type, which exhibited significant EMT and fibrosis features. Our work comprehensively characterized the pathological mesangial signatures, highlighting the step-by-step pathogenic process of IgA nephropathy from mesangium to epithelium.