Accession SAMC1581165
Accession in Other Database GSA-Human: HRS143725
Sample name HD4-CD8-Tss
Title HD4-CD8-Tss
Sample type Human sample
Organism Homo sapiens
Description Steady state CD8+ T cells in human bone marrow
Attributes *This sample record contains additional controlled-access information that is avaiable from GSA-Human by requesting study HRA000625 in the GSA-Human system.
Release date 2021-02-03
BioProject Accession PRJCA004411
Submitter Ruifeng  Li  (cheng_li@pku.edu.cn)
Organization Peking University
Submission date 2023-06-18

Sample Data

Resource name Description
GSA-Human (1) -
HRA000625  (Controlled Access) Here, we characterized the gene expression profile in tolerant T cells which was induced in healthy donors by granulocyte colony-stimulating factor, a stem cell mobilizer extensively used in HSCT. We identified suppressor of cytokine signaling 1 (SOCS1) as an essential immune checkpoint for T cell tolerance in the mouse models and primary T cells in the HSCT context. Further spatial multiomics analysis characterized the distinct three-dimensional genome architecture and the gene regulatory network in tolerant T cells. We found STAT3 competes with CTCF and mediates the formation of a new chromatin loop between the SOCS1 promoter and upstream super enhancers during the induction of T cell tolerance. This study identifies SOCS1 as a key immune checkpoint and potential immune target for improving outcome of patients with HSCT.
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