Accession SAMC1650516
Accession in Other Database GSA-Human: HRS161451
Sample name CRC5-T
Title CRC5-T
Sample type Human sample
Organism Homo sapiens
Description Surgical resection sample of primary tumor
Attributes *This sample record contains additional controlled-access information that is avaiable from GSA-Human by requesting study HRA000762 in the GSA-Human system.
Release date 2021-05-24
BioProject Accession PRJCA004804
Submitter Dan  Xie  (danxie@scu.edu.cn)
Organization West China Hospital Sichuan University
Submission date 2023-06-18

Sample Data

Resource name Description
GSA-Human (1) -
HRA000762  (Controlled Access) In this study, we characterized the evolutionary pattern of metastatic CRC (mCRC) by analysing bulk and single-cell exome sequencing data of primary and metastatic tumors from 7 CRC patients with liver metastases. Here, 7 CRC patients had bulk WES, and 4 for whom both bulk and single cell sequencing were pursued. Despite low genomic divergence between paired primary and metastatic cancers in the bulk data, single-cell whole-exome sequencing (scWES) data revealed rare mutations and defined two separate cell populations, indicative of the independent evolutionary trajectory between primary and metastatic tumor cells. We further identified 24 metastatic cell-specific mutated genes and validated their functions in cell migration capacity. In summary, scWES revealed rare mutations that failed to be detected by bulk WES. These rare mutations better define the distinct genomic profiles of primary and metastatic tumor cell clones.