Accession SAMC1684171
Accession in Other Database GSA-Human: HRS171821
Sample name N_4
Title N_4
Sample type Human sample
Organism Homo sapiens
Description RNA-Seq of normal Esophageal tissue
Attributes *This sample record contains additional controlled-access information that is avaiable from GSA-Human by requesting study HRA000885 in the GSA-Human system.
Release date 2021-06-01
BioProject Accession PRJCA005288
Submitter Yu  Kai  (yukai@sysucc.org.cn)
Organization Sun Yat-sen University Cancer Center
Submission date 2023-06-18

Sample Data

Resource name Description
GSA-Human (1) -
HRA000885  (Controlled Access) Tumor-associated macrophages (TAM) are the most abundant immune cells in tumor microenvironment. Liquid-liquid phase separation (LLPS) occurs in a wide range of biological processes, while its role and the underlying mechanisms in tumor remain obscure. Here, we uncovered a Macrophage Associated LncRNA (MALR) driving LLPS of interleukin enhancer-binding factor 3 (ILF3). MALR is upregulated by TAM and associated with poor prognosis for esophageal squamous cell carcinoma (ESCC). Mechanistically, MALR facilitates malignant phenotypes of ESCC via HIF1A activation via HIF1A MALR promotes ILF3-mediated LLPS by preventing SPOP-mediated ubiquitination. Accordingly, MALR-ILF3-mediated LLPS enhances HIF1A mRNA stability by preventing PARN mediated degradation. Functionally, MALR-ILF3-HIF1A axis promotes tumor malignant progression by enhancing glycolytic activity and facilitating angiogenesis. Clinically, MALR expression significantly correlates with HIF1A pathway activation and ESCC progression.
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