| Submission | GVM000853 2024-09-20 Jiangxi Agricultural University |
| Organism | Sus scrofa |
| Version | Sscrofa11.1 |
| BioProject | PRJCA030301 |
| Sample numbers | 747 |
| Abstract | We constructed the most comprehensive porcine MEVs library based on high-depth whole genome sequencing (WGS) data from 747 pigs across 59 breeds worldwide. This database identified a total of 147,993 polymorphic MEVs, among which 54% are newly discovered.Finally, we provide a high-quality SNP-MEVs reference haplotype panel to impute the MEVs genotype from genome-wide SNPs. Notably, we identified a candidate MEV significantly associated with total teat number, demonstrating the functionality of this reference panel. |
| Release date | 2024-09-20 |
| Available data | |
| ME10.vcf.gz http ftp | |
| ME11.vcf.gz http ftp | |
| ME12.vcf.gz http ftp | |
| ME13.vcf.gz http ftp | |
| ME14.vcf.gz http ftp | |
| ME15.vcf.gz http ftp | |
| ME16.vcf.gz http ftp | |
| ME17.vcf.gz http ftp | |
| ME18.vcf.gz http ftp | |
| ME1.vcf.gz http ftp | |
| ME2.vcf.gz http ftp | |
| ME3.vcf.gz http ftp | |
| ME4.vcf.gz http ftp | |
| ME5.vcf.gz http ftp | |
| ME6.vcf.gz http ftp | |
| ME7.vcf.gz http ftp | |
| ME8.vcf.gz http ftp | |
| ME9.vcf.gz http ftp | |
| MEX.vcf.gz http ftp | |
| m10.pashed.vcf.gz http ftp | |
| m11.pashed.vcf.gz http ftp | |
| m12.pashed.vcf.gz http ftp | |
| m13.pashed.vcf.gz http ftp | |
| m14.pashed.vcf.gz http ftp | |
| m15.pashed.vcf.gz http ftp | |
| m16.pashed.vcf.gz http ftp | |
| m17.pashed.vcf.gz http ftp | |
| m18.pashed.vcf.gz http ftp | |
| m1.pashed.vcf.gz http ftp | |
| m2.pashed.vcf.gz http ftp | |
| m3.pashed.vcf.gz http ftp | |
| m4.pashed.vcf.gz http ftp | |
| m5.pashed.vcf.gz http ftp | |
| m6.pashed.vcf.gz http ftp | |
| m7.pashed.vcf.gz http ftp | |
| m8.pashed.vcf.gz http ftp | |
| m9.pashed.vcf.gz http ftp | |
