1. GVM / Search / Search result

Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA　 rRNA　 miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yield

Pfam

 
 
 

Setting Properties

limit the maximum number of items
Items  1  - 10 of 13327822       Items per page  First Prev of 1332783 Next Last
All VarID
 Position
 Alleles
 MAF
 Consequence Type|Effect
 Gene
 dbSNP
 Database
hsa277 1:715348 T/G T:0.0000 upstream_gene_variant|MODIFIER; ENSG00000228327 (RP11-206L10.2) rs3131984
upstream_gene_variant|MODIFIER; intron_variant|MODIFIER; non_coding_transcript_variant|MODIFIER; ENSG00000237491 (RP11-206L10.9)
hsa543 1:758324 T/C T:0.0000 downstream_gene_variant|MODIFIER; ENSG00000177757 (FAM87B) rs3131955
downstream_gene_variant|MODIFIER; ENSG00000225880 (LINC00115)
upstream_gene_variant|MODIFIER; ENSG00000228794 (LINC01128)
hsa638 1:775426 G/A G:0.0000 intron_variant|MODIFIER; non_coding_transcript_variant|MODIFIER; ENSG00000228794 (LINC01128) rs2905037
hsa650 1:778569 A/G A:0.0000 intron_variant|MODIFIER; non_coding_transcript_variant|MODIFIER; downstream_gene_variant|MODIFIER; ENSG00000228794 (LINC01128) rs2977615
hsa658 1:780027 G/T G:0.0000 intron_variant|MODIFIER; non_coding_transcript_variant|MODIFIER; downstream_gene_variant|MODIFIER; ENSG00000228794 (LINC01128) rs2977613
hsa762 1:799463 T/C T:0.0000 downstream_gene_variant|MODIFIER; ENSG00000228794 (LINC01128) rs4245756
downstream_gene_variant|MODIFIER; ENSG00000230368 (FAM41C)
hsa803 1:807512 A/G A:0.0000 intron_variant|MODIFIER; non_coding_transcript_variant|MODIFIER; upstream_gene_variant|MODIFIER; ENSG00000230368 (FAM41C) rs10751454
upstream_gene_variant|MODIFIER; ENSG00000234711 (TUBB8P11)
hsa822 1:812751 T/C T:0.0000 upstream_gene_variant|MODIFIER; ENSG00000230368 (FAM41C) rs4246500
downstream_gene_variant|MODIFIER; ENSG00000234711 (TUBB8P11)
hsa1413 1:842825 A/G A:0.0000 upstream_gene_variant|MODIFIER; ENSG00000230699 (RP11-54O7.1) rs7519340
intron_variant|MODIFIER; non_coding_transcript_variant|MODIFIER; ENSG00000272438 (RP11-54O7.16)
hsa1434 1:847250 G/A G:0.0000 downstream_gene_variant|MODIFIER; ENSG00000223764 (RP11-54O7.3) rs7416129
intron_variant|MODIFIER; non_coding_transcript_variant|MODIFIER; ENSG00000230699 (RP11-54O7.1)
upstream_gene_variant|MODIFIER; ENSG00000241180 (RP11-54O7.2)
intron_variant|MODIFIER; non_coding_transcript_variant|MODIFIER; ENSG00000272438 (RP11-54O7.16)