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Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA　 rRNA　 miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yield

Pfam

 
 
 

Setting Properties

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All VarID
 Position
 Alleles
 MAF
 Consequence Type|Effect
 Gene
 dbSNP
gmx60169698 Chr01:8 T/G T:0.5000 intergenic_variant|MODIFIER;  
gmx22974108 Chr01:27 A/G G:0.0017 intergenic_variant|MODIFIER;  
gmx22974109 Chr01:35 G/C C:0.0193 intergenic_variant|MODIFIER;  
gmx3 Chr01:36 G/A A:0.1021 intergenic_variant|MODIFIER;  
gmx60169699 Chr01:37 T/G T:0.5000 intergenic_variant|MODIFIER;  
gmx75886138 Chr01:39 T/G -:- intergenic_variant|MODIFIER; rs5994754263
gmx60169700 Chr01:42 C/G G:0.5000 intergenic_variant|MODIFIER;  
gmx61061947 Chr01:44 G/A A:0.5000 intergenic_variant|MODIFIER;  
gmx60169701 Chr01:49 G/C C:0.5000 intergenic_variant|MODIFIER;  
gmx60169702 Chr01:63 T/G,A G:0.5000 intergenic_variant|MODIFIER; rs743537926