| Title | Quartet RNAseq |
|---|---|
| Description | As part of the Quartet Project for quality control and data integration of multiomics profiling, we established four RNA reference materials derived from immortalized B-lymphoblastoid cell lines from four members of a monozygotic twin family. Additionally, RNAseq datasets from the Quartet RNA reference materials were then collected, consisting of 252 RNAseq libraries from 21 batches generated in eight labs using two library construction protocols (poly(A) selection and RiboZero) and two sequencing platforms (Illumina NovaSeq and MGI DNBSEQ-T7). |
| Organism | Homo sapiens |
| Data Type | Expression Profiling by NGS |
| Data Accessibility | Open-access |
| BioProject | PRJCA012423 |
| Release Date | 2024-10-11 |
| Submitter | Yuanting Zheng (zhengyuanting@fudan.edu.cn) |
| Organization | Fudan University |
| Submission Date | 2022-11-01 |
HTTP download speed may be slow. It is highly recommended that you download the dataset using a dedicated FTP tool (such as FileZilla Client).
| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download |
|---|---|---|---|---|---|---|
| OMIX002254-01 | Count matrix of multi-batch RNAseq dataset | 1 | Expression Profiling by NGS | 40.7 MB | csv |
| Paper Title | Journal Name | Publish Time | Accession | Citing Type |
|---|---|---|---|---|
| Quartet RNA reference materials improve the quality of transcriptomic data through ratio-based profiling | Nature Biotechnology | 2023-07 | OMIX002254 | Deposit |
| Multi-omics data integration using ratio-based quantitative profiling with Quartet reference materials | Nature Biotechnology | 2023-09 | OMIX002214 OMIX004562 OMIX002260 OMIX002254 OMIX002234 | Deposit |
| Construction of RNA reference materials for improving the quantification of transcriptomic data | Nature Protocols | 2025-02 | OMIX002254 | Deposit |
| The Quartet Data Portal: integration of community-wide resources for multiomics quality control | Genome Biology | 2023-10 | OMIX002214 OMIX004562 OMIX002260 OMIX002254 OMIX002234 | Deposit |
| Haplotype-resolved assemblies and variant benchmark of a Chinese Quartet | Genome Biology | 2023-12 | OMIX002260 OMIX002254 OMIX002234 OMIX002214 | Deposit |
| Assessing and mitigating batch effects in large-scale omics studies | Genome Biology | 2024-10 | OMIX002254 | Deposit |