| Title | Single-cell profiling of the amphioxus digestive tract reveals conservation of endocrine cells in chordates |
|---|---|
| Description | In this study, cells in the digestive tract of a cephalochordate, Branchiostoma floridae, were profiled using bulk-tissue and single-cell RNA-sequencing. Furthermore, Pdx, Ilp1, Ilp2, and Ilpr knockout amphioxus lines were investigated to study midgut development and Ilp function in detail. |
| Organism | Branchiostoma floridae |
| Data Type | Expression Profiling |
| Data Accessibility | Open-access |
| BioProject | PRJCA025534 |
| Release Date | 2024-12-09 |
| Submitter | Weiqiang Liu (weiqiang_liu2015@outlook.com) |
| Organization | Institute of Zoology, Chinese Academy of Sciences |
| Submission Date | 2024-04-24 |
HTTP download speed may be slow. It is highly recommended that you download the dataset using a dedicated FTP tool (such as FileZilla Client).
| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download |
|---|---|---|---|---|---|---|
| OMIX006304-01 | bulk-RNA-seq_scRNA-seq_amphioxus_digestive_tract.tar.gz | 94 | Expression Profiling | 9.69 GB | tar.gz |
| Paper Title | Journal Name | Publish Time | Accession | Citing Type |
|---|---|---|---|---|
| volutionary dynamics of FoxQ2 transcription factors across metazoans reveals three ancient paralogs | Communications Biology | 2025-12 | OMIX006304 | Secondary use |
| Single-cell profiling of the amphioxus digestive tract reveals conservation of endocrine cells in chordates | Science Advances | 2024-12 | OMIX006304 | Deposit |