OMIX006423

1Summary

Title	The Effect of Microbial Inoculant on Microbial Community Diversity and Function in Rhizospheric Soil Under Tobacco Monoculture
Description	Over-application of chemical fertilizers and continuous cropping obstacles seriously restrict the sustainable development of tobacco production. Localized fertilization of beneficial microbes has potential advantages in achieving higher productivity, but the underlying biological mechanisms of interactions between rhizospheric microorganisms and the related metabolic cycle remain poorly characterized. Here, an integrative analysis of microbiomes with non-targeted metabolomics was performed on 30 soil samples of rhizosphere, root surrounding, and bulk soils from flue cured tobacco under continuous and non-continuous monocropping systems. The analysis was conducted using UPLC-MS/MS platforms and high-throughput sequencing targeting the bacterial 16S rRNA gene and fungal ITS gene. The interactions between plant roots and rhizospheric microorganisms provide valuable information for understanding how these beneficial microbes affect complex biological processes and the adaption capacity of plants to environments.
Organism	Nicotiana tabacum
Data Type	Metabolome Data by Mass Spectrometry (MS)
Data Accessibility	Open-access
BioProject	PRJCA026132
Release Date	2024-06-30
Submitter	Xianjun Lai (laixianj@hotmail.com)
Organization	Xichang University
Submission Date	2024-05-14

2Files & Download

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File ID	File Title	Number/Samples	File Type	File Size	File Suffix	Download
OMIX006423-01	negative ion CCN replicate 1	1	Metabolome Data by Mass Spectrometry (MS)	1.63 GB	raw	FTP HTTPs
OMIX006423-02	negative ion CCN replicate 2	1	Metabolome Data by Mass Spectrometry (MS)	1.65 GB	raw	FTP HTTPs
OMIX006423-03	negative ion CCN replicate 3	1	Metabolome Data by Mass Spectrometry (MS)	1.63 GB	raw	FTP HTTPs
OMIX006423-04	negative ion CCN replicate 4	1	Metabolome Data by Mass Spectrometry (MS)	1.32 GB	raw	FTP HTTPs
OMIX006423-05	negative ion CCN replicate 5	1	Metabolome Data by Mass Spectrometry (MS)	1.3 GB	raw	FTP HTTPs
OMIX006423-06	negative ion CCN replicate 6	1	Metabolome Data by Mass Spectrometry (MS)	1.33 GB	raw	FTP HTTPs
OMIX006423-07	negative ion CCY replicate 1	1	Metabolome Data by Mass Spectrometry (MS)	1.57 GB	raw	FTP HTTPs
OMIX006423-08	negative ion CCY replicate 2	1	Metabolome Data by Mass Spectrometry (MS)	1.54 GB	raw	FTP HTTPs
OMIX006423-09	negative ion CCY replicate 3	1	Metabolome Data by Mass Spectrometry (MS)	1.54 GB	raw	FTP HTTPs
OMIX006423-10	negative ion CCY replicate 4	1	Metabolome Data by Mass Spectrometry (MS)	1.25 GB	raw	FTP HTTPs
OMIX006423-11	negative ion CCY replicate 5	1	Metabolome Data by Mass Spectrometry (MS)	1.28 GB	raw	FTP HTTPs
OMIX006423-12	negative ion CCY replicate 6	1	Metabolome Data by Mass Spectrometry (MS)	1.26 GB	raw	FTP HTTPs
OMIX006423-13	negative ion NCN replicate 1	1	Metabolome Data by Mass Spectrometry (MS)	1.55 GB	raw	FTP HTTPs
OMIX006423-14	negative ion NCN replicate 2	1	Metabolome Data by Mass Spectrometry (MS)	1.46 GB	raw	FTP HTTPs
OMIX006423-15	negative ion NCN replicate 3	1	Metabolome Data by Mass Spectrometry (MS)	1.45 GB	raw	FTP HTTPs
OMIX006423-16	negative ion NCN replicate 4	1	Metabolome Data by Mass Spectrometry (MS)	1.19 GB	raw	FTP HTTPs
OMIX006423-17	negative ion NCN replicate 5	1	Metabolome Data by Mass Spectrometry (MS)	1.22 GB	raw	FTP HTTPs
OMIX006423-18	negative ion NCN replicate 6	1	Metabolome Data by Mass Spectrometry (MS)	1.22 GB	raw	FTP HTTPs
OMIX006423-19	negative ion NCY replicate 1	1	Metabolome Data by Mass Spectrometry (MS)	1.46 GB	raw	FTP HTTPs
OMIX006423-20	negative ion NCY replicate 2	1	Metabolome Data by Mass Spectrometry (MS)	1.44 GB	raw	FTP HTTPs
OMIX006423-21	negative ion NCY replicate 3	1	Metabolome Data by Mass Spectrometry (MS)	1.43 GB	raw	FTP HTTPs
OMIX006423-22	negative ion NCY replicate 4	1	Metabolome Data by Mass Spectrometry (MS)	1.14 GB	raw	FTP HTTPs
OMIX006423-23	negative ion NCY replicate 5	1	Metabolome Data by Mass Spectrometry (MS)	1.18 GB	raw	FTP HTTPs
OMIX006423-24	negative ion NCY replicate 6	1	Metabolome Data by Mass Spectrometry (MS)	1.17 GB	raw	FTP HTTPs
OMIX006423-25	negative ion T0S replicate 1	1	Metabolome Data by Mass Spectrometry (MS)	1.14 GB	raw	FTP HTTPs
OMIX006423-26	negative ion T0S replicate 2	1	Metabolome Data by Mass Spectrometry (MS)	1.14 GB	raw	FTP HTTPs
OMIX006423-27	negative ion T0S replicate 3	1	Metabolome Data by Mass Spectrometry (MS)	1.12 GB	raw	FTP HTTPs
OMIX006423-28	negative ion T0X replicate 1	1	Metabolome Data by Mass Spectrometry (MS)	1.11 GB	raw	FTP HTTPs
OMIX006423-29	negative ion T0X replicate 2	1	Metabolome Data by Mass Spectrometry (MS)	1.12 GB	raw	FTP HTTPs
OMIX006423-30	negative ion T0X replicate 3	1	Metabolome Data by Mass Spectrometry (MS)	1.12 GB	raw	FTP HTTPs
OMIX006423-31	positive ion CCN replicate 1	1	Metabolome Data by Mass Spectrometry (MS)	2.53 GB	raw	FTP HTTPs
OMIX006423-32	positive ion CCN replicate 2	1	Metabolome Data by Mass Spectrometry (MS)	2.5 GB	raw	FTP HTTPs
OMIX006423-33	positive ion CCN replicate 3	1	Metabolome Data by Mass Spectrometry (MS)	2.45 GB	raw	FTP HTTPs
OMIX006423-34	positive ion CCN replicate 4	1	Metabolome Data by Mass Spectrometry (MS)	1.9 GB	raw	FTP HTTPs
OMIX006423-35	positive ion CCN replicate 5	1	Metabolome Data by Mass Spectrometry (MS)	1.85 GB	raw	FTP HTTPs
OMIX006423-36	positive ion CCN replicate 6	1	Metabolome Data by Mass Spectrometry (MS)	1.92 GB	raw	FTP HTTPs
OMIX006423-37	positive ion CCY replicate 1	1	Metabolome Data by Mass Spectrometry (MS)	2.44 GB	raw	FTP HTTPs
OMIX006423-38	positive ion CCY replicate 2	1	Metabolome Data by Mass Spectrometry (MS)	2.39 GB	raw	FTP HTTPs
OMIX006423-39	positive ion CCY replicate 3	1	Metabolome Data by Mass Spectrometry (MS)	2.39 GB	raw	FTP HTTPs
OMIX006423-40	positive ion CCY replicate 4	1	Metabolome Data by Mass Spectrometry (MS)	1.77 GB	raw	FTP HTTPs
OMIX006423-41	positive ion CCY replicate 5	1	Metabolome Data by Mass Spectrometry (MS)	1.82 GB	raw	FTP HTTPs
OMIX006423-42	positive ion CCY replicate 6	1	Metabolome Data by Mass Spectrometry (MS)	1.77 GB	raw	FTP HTTPs
OMIX006423-43	positive ion NCN replicate 1	1	Metabolome Data by Mass Spectrometry (MS)	2.41 GB	raw	FTP HTTPs

3Relevant Publications

Paper Title	Journal Name	Publish Time	Accession	Citing Type
Integrative analysis of microbiome and metabolome revealed the effect of microbial inoculant on microbial community diversity and function in rhizospheric soil under tobacco monoculture	Microbiology Spectrum	2024-08	OMIX006423	Deposit

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