| Title | Cross-species Single-cell Transcriptomics Reveals Neuronal Similarities and Heterogeneity in Amniote Pallium |
|---|---|
| Description | The amniote pallium, a vital component of the forebrain, has undergone considerable evolutionary divergence across species and is critical for a variety of functions including sensation, memory and learning. The relationship between pallial subregions in different species remain elusive, particularly regarding the identification of homologous neurons and their similar or distinct signatures. Here, we utilized single-nucleus RNA sequencing to examine over 130,000 nuclei from macaque (Macaca fascicularis) neocortex, alongside datasets from human (Homo sapiens), mouse (Mus musculus), zebra finch(Taeniopygia guttata), turtle (Chrysemys picta bellii), and lizard (Pogona vitticeps), for a cross-species comparison. |
| Organism | Macaca fascicularis |
| Data Type | Expression Profiling |
| Data Accessibility | Open-access |
| BioProject | PRJCA031422 |
| Release Date | 2024-10-26 |
| Submitter | Fubaoqian Huang (huangbaoqian@genomics.cn) |
| Organization | BGI, Hangzhou |
| Submission Date | 2024-10-24 |
HTTP download speed may be slow. It is highly recommended that you download the dataset using a dedicated FTP tool (such as FileZilla Client).
| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download |
|---|---|---|---|---|---|---|
| OMIX007704-01 | features.tsv.gz | 1 | Expression Profiling | 155.79 KB | tsv.gz | |
| OMIX007704-02 | cluster_files.txt | 1 | Expression Profiling | 17.74 MB | txt | |
| OMIX007704-03 | barcodes.tsv.gz | 1 | Expression Profiling | 378.35 KB | tsv.gz | |
| OMIX007704-04 | matrix.mtx.gz | 1 | Expression Profiling | 823.31 MB | mtx.gz |
| Paper Title | Journal Name | Publish Time | Accession | Citing Type |
|---|---|---|---|---|
| Cross-species single-cell transcriptomics reveals neuronal similarities and heterogeneity in amniote pallium | Zoological Research | 2025-01 | OMIX007704 | Deposit |