| Title | Tri-omic single-cell mapping of the 3D epigenome and transcriptome in whole mouse brains throughout the lifespan (ChAIR-PET) |
|---|---|
| Description | We developed ChAIR, a high-throughput approach to simultaneously assess chromatin accessibility, chromatin interactions, and RNA expression, in single cells. We use ChAIR to identify a temporal and causal mechanism that links 3D epigenome remodeling and transcriptional regulation in mammalian cells. |
| Organism | Mus musculus |
| Data Type | Other Type of Genomic Data |
| Data Accessibility | Open-access |
| BioProject | PRJCA024774 |
| Release Date | 2025-05-06 |
| Submitter | Yijun Ruan (yjruan@zju.edu.cn) |
| Organization | Zhejiang University |
| Submission Date | 2025-03-26 |
HTTP download speed may be slow. It is highly recommended that you download the dataset using a dedicated FTP tool (such as FileZilla Client).
| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download |
|---|---|---|---|---|---|---|
| OMIX009589-01 | ChAIR-PET result | 1 | Other Type of Genomic Data | 37.61 GB | tar.gz |
| Paper Title | Journal Name | Publish Time | Accession | Citing Type |
|---|---|---|---|---|
| geomeTriD: a Bioconductor package for interactive and integrative visualization of 3D structural model with multi-omics data | Bioinformatics Advances | 2025-11 | OMIX009589 OMIX009588 OMIX009587 | Secondary use |