| Title | ScRNA-Seq of Rat Testicular Interstitial Cells |
|---|---|
| Description | This dataset contains 14 files of a scRNA-seq study of rat testicular interstitial cells. These are processed datasets, including expressing matrix (*.mtx) files and differential expression gene (DEG) lists. |
| Organism | Rattus |
| Data Type | Mixed |
| Data Accessibility | Open-access |
| BioProject | PRJCA006440 |
| Release Date | 2022-02-21 |
| Submitter | Haolin Chen (haolinchen8@163.com) |
| Organization | The Second Affiliated Hospital of Wenzhou Medical University |
| Submission Date | 2021-09-25 |
HTTP download speed may be slow. It is highly recommended that you download the dataset using a dedicated FTP tool (such as FileZilla Client).
| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download |
|---|---|---|---|---|---|---|
| OMIX672-20-01 | DEGs of stromal cells | 1 | Transcriptomic | 8.94 MB | xlsx | |
| OMIX672-20-02 | DEGs of cluster2+ vs 2- cells | 1 | Transcriptomic | 1.94 MB | xlsx | |
| OMIX672-20-03 | DEGs of Immune cells | 1 | Transcriptomic | 4.88 MB | xlsx | |
| OMIX672-20-04 | DEGs of cluster2 vs 9 | 1 | Transcriptomic | 2.22 MB | xlsx | |
| OMIX672-20-05 | DEGs of Leydig cells | 1 | Transcriptomic | 8.92 MB | xlsx | |
| OMIX672-20-06 | Features for mtx file | 1 | Transcriptomic | 224.88 KB | tsv | |
| OMIX672-20-07 | DEGs of cluster2+ vs 9+ cells | 1 | Transcriptomic | 1.66 MB | xlsx | |
| OMIX672-20-08 | DEGs of cluster6 vs 9 | 1 | Transcriptomic | 2.17 MB | xlsx | |
| OMIX672-20-09 | Barcodes for mtx file | 1 | Transcriptomic | 183.74 KB | tsv | |
| OMIX672-20-10 | DEGs of endothelial cells | 1 | Transcriptomic | 8.95 MB | xlsx | |
| OMIX672-20-11 | DEGs of cluster2 vs 6 | 1 | Transcriptomic | 2.21 MB | xlsx | |
| OMIX672-20-12 | DEGs of cluster2- vs 6+ cells | 1 | Transcriptomic | 2.03 MB | xlsx | |
| OMIX672-20-13 | Expression matrix file (.mtx) | 1 | Transcriptomic | 207.39 MB | matrix.mtx | |
| OMIX672-20-14 | DEGs of cluster6+ vs 6- cells | 1 | Transcriptomic | 1.9 MB | xlsx |
| Paper Title | Journal Name | Publish Time | Accession | Citing Type |
|---|---|---|---|---|
| Identification of Rat Testicular Leydig Precursor Cells by Single-Cell-RNA-Sequence Analysis | Frontiers in Cell and Developmental Biology | 2022-02 | OMIX672 | Deposit |
| Effects of Leydig cell elimination on testicular interstitial cell populations: characterization by scRNA-seq and immunocytochemical techniques | Frontiers in Endocrinology | 2024-08 | OMIX672 | Deposit |