CWM2 - Plant Editosome Database - BIG Data Center

CWM2 - Plant Editosome Database - BIG Data Center

Summary

Editing Factor:	CWM2
Synonym:	RRD2
Description:	pentatricopeptide (PPR) repeat-containing protein;(source:Araport11)
Protein Family:	PPR
Subclass:	NA
Construct Structure:	NA
Gene ID & Species:	AT1G32415 (Arabidopsis thaliana)
Edited Gene(s):	ccmC
Editing Type(s):	C-to-U (3)
Publication(s):	[1] Mitochondrial Defects Confer Tolerance against Cellulose Deficiency, Plant Cell, 2016. [PMID=27543091]

Editing Details

Species

Gene ID

Organelle

Edited Gene

Position

Region

Editing Type

Codon

Amino Acid

Molecular Effect

Experiment Details

Arabidopsis thaliana

AT1G32415

Mitochondrion

575

CDS

C-to-U

CCC=>CUC

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
Col-0	WT	No treatment	No treatment	No treatment	Normal	Root	5-day-old	RT-PCR and direct sequencing	93.33%	High	None	27543091
SALK_020569C	cwm2-1	T-DNA insertion	The cwm2-1 locus was mapped into the 171.8-kb region between SSLP markers CH1_11687 and CH1_11589	NA	Higher respiration than the wild type;C17 tolerance	Root	5-day-old	RT-PCR and direct sequencing	28.57%	Low	Decreased	27543091
SALK_027874	cwm2-2	T-DNA insertion	The cwm2-2 locus was mapped into the 171.8-kb region between SSLP markers CH1_11687 and CH1_11589	Knockout	Higher respiration than the wild type;C17 tolerance	Root	5-day-old	RT-PCR and direct sequencing	39.39%	Low	Decreased	27543091

Last update: Jul 2021 (version 1.0)