| AEF1 | Arabidopsis thaliana | PPR | E | Growth; Leaf color | 2 | Chloroplast Mitochondrion Plastid
| atpF nad5 atpF | |
| AHG11 | Arabidopsis thaliana | PPR | E+ | Phytohormone abscisic acid response; Growth | 1 | Mitochondrion
| nad4 | |
| ASL | Oryza sativa | PPR | DYW | Chloroplast development | 4 | Chloroplast
| rpl2, ndhB, rps14, ndhA | |
| ATP4 | Oryza sativa Zea mays | PPR | P | Cold-sensitivity | 1 | Chloroplast
| rps8 | |
| bCCP1 | Zea mays | NA | NA | Seed development | 31 | Mitochondrion
| rps7, rps12, nad3, mttB, nad4, cox1, atp9, atp8, matR, rpl16, rps13, rps4, rps3, rps2B, rps2A, rps1, atp6, atp4, ccmFn, ccmFc, ccmB, nad9, nad7, nad6, nad5, nad4L, nad2, nad1, cox3, cox2, cob | |
| BLX | Arabidopsis thaliana | PPR | DYW | Development | 11 | Mitochondrion
| cox3, cox2, rps12, rps3, nad6, nad2B, nad2A, nad1, nad7, nad4, nad3 | |
| BnaA02.YTG1 | Brassica napus | TPR | NA | Chloroplast biogenesis | 4 | Chloroplast
| ndhG, petL, ndhF, ndhD | |
| CLB19 | Arabidopsis thaliana | PPR | E+ | Leaf color; Seedling lethality | 2 | Chloroplast Plastid
| clpP, rpoA rpoA, clpP | |
| COD1 | Arabidopsis thaliana | PPR | E+ | Embryo development; Seed growth | 2 | Mitochondrion
| nad4, cox2 | |
| CP31A | Arabidopsis thaliana | cpRNP | NA | NA | 8 | Chloroplast
| psbZ, rps14, rpoB, petL, ndhF, ndhD, ndhB, matK | |
| CP31B | Arabidopsis thaliana | cpRNP | NA | NA | 3 | Chloroplast
| ndhD, rpoB, psbZ | |
| CREF3 | Arabidopsis thaliana | PPR | DYW | Growth | 1 | Chloroplast Plastid
| psbE psbE | |
| CREF7 | Arabidopsis thaliana | PPR | DYW | NA | 2 | Chloroplast Plastid
| rpoA, ndhB ndhB | |
| CRR21 | Arabidopsis thaliana | PPR | E+ | NA | 1 | Chloroplast Plastid
| ndhD ndhD | |
| CRR22 | Arabidopsis thaliana | PPR | DYW | Growth | 3 | Chloroplast Plastid
| rpoB, ndhD, ndhB rpoB, ndhD, ndhB | |
| CRR28 | Arabidopsis thaliana | PPR | DYW | Growth | 2 | Chloroplast Plastid
| ndhD, ndhB ndhD, ndhB | |
| CRR4 | Arabidopsis thaliana Nicotiana sylvestris Nicotiana tabacum Nicotiana tomentosiformis | PPR | E+ | Growth | 1 | Chloroplast Plastid
| ndhD ndhD | |
| CTEF2 | Gossypium hirsutum | PPR | DYW | Chloroplast development; Photosynthesis | 3 | Plastid
| rps18, accD, ndhB | |
| CWM1 | Arabidopsis thaliana Macadamia integrifolia | PPR | E | Respiration; Tolerance; Growth Growth | 3 | Mitochondrion
| ccmC, nad5, ccmB | |
| CWM2 | Arabidopsis thaliana | PPR | NA | Respiration; Tolerance | 1 | Mitochondrion
| ccmC | |
| Dek10 | Zea mays | PPR | E | Seed development; Development | 2 | Mitochondrion
| nad3, cox2 | |
| DEK36 | Arabidopsis thaliana Zea mays | PPR | E+ | Seed development; Seed lethality; Seedling lethality | 7 | Mitochondrion
| rps12, ccmFn2, ccmFn1, nad3, ccmFn, nad7, atp4 | |
| DEK39 | Zea mays | PPR | E | Seed development; Seedling lethality | 1 | Mitochondrion
| nad3 | |
| DEK40 | Zea mays | PPR | E+ | Kernel development; Endosperm development | 3 | Mitochondrion
| nad5, nad2, cox3 | |
| DEK46 | Zea mays | PPR | DYW | Seed development | 1 | Mitochondrion
| nad7 | |
| DEK48 | Zea mays | PPR | DYW | Embryo development; Endosperm development; Kernel development | 3 | Mitochondrion
| nad9, nad4, nad3 | |
| DEK504 | Zea mays | PPR | E+ | Seed development | 1 | Mitochondrion
| nad3 | |
| DEK53 | Zea mays | PPR | E | Seed development | 23 | Mitochondrion
| matR, rpl16, rps3, rps2B, nad1, mttB, cox2, cob, ccmFn, ccmFC, ccmC, ccmB, atp8, atp6, atp4, atp1, rps4, nad9, nad7, nad6, nad5, nad3, nad2 | |
| DEK55 | Zea mays | PPR | E | Kernel development | 14 | Mitochondrion
| nad7, rps3, rps13, rps12, rps12_ct, nad6, nad4, nad3, matR, cob, ccmFn, ccmFc, atp8, atp1 | |
| DEK56 | Zea mays | PPR | E | Seed development | 21 | Mitochondrion
| rps13, rps4, nad5, nad4, nad3, nad2, nad1, mttb, ccmFc, ccmB, atp4, rps12_ct, rps3, rps2B, rps2A, nad6, matR, cox3, cox2, ccmFn, atp1 | |
| Dek570‑1 | Zea mays | PPR | DYW | Seed development; Plant development | 3 | Chloroplast Mitochondrion
| rpl20 nad2, ccmFc | |
| DEK605 | Zea mays | PPR | DYW | Seed development; Seedling development | 1 | Mitochondrion
| nad1 | |
| DG1 | Arabidopsis thaliana | PPR | P | Leaf development; Chloroplast biogenesis | 3 | Chloroplast
| petL, ndhD, accD | |
| DG409 | Arabidopsis thaliana | PPR | PLS | Chloroplast development; Mitochondrion development | 7 | Chloroplast Mitochondrion
| accD, rpoA, clpP orf313, ORFB, nad7, rps3 | |
| DOT4 | Arabidopsis thaliana | PPR | DYW | Leaf color; Leaf morphology | 1 | Chloroplast Plastid
| rpoC1 rpoC1 | |
| DUA1 | Oryza sativa | PPR | DYW | Chloroplast development; Temperature response | 2 | Chloroplast
| rps8, rpoB | |
| DYW1 | Arabidopsis thaliana | PPR | DYW | Growth | 1 | Chloroplast Plastid
| ndhD ndhD | |
| DYW2 | Arabidopsis thaliana | PPR | DYW | Seed development | 52 | Mitochondrion Plastid
| rps7, rpl2, orf240A, ccmFn2, ccmFn1, atp9, atp1, nad3, rps12, ccmC, cox3, nad4L, atp4, nad4, mttB, matR, nad1, nad7, atp8, atp6, rps4, nad2, nad6, cob, pseudo-rps14, rpl5, ccmFc, cox2, ccmB, rps3, rpl16, nad9, nad5 rps14, psbZ, psbF, psbE, petL, ndhG, ndhF, matK, accD, ndhD, ndhB, rpl23, rpoA, clpP, rps12, rps4, ycf3, rpoB, rpoC1, atpH, atpF | |
| DYW2A | Zea mays | PPR | DYW | Embryogenesis; Endosperm development | 38 | Mitochondrion Plastid
| rpl16, rps13, rps12_ct, rps12, rps7, rps4, rps3, rps2B, rps2A, cox3, cox2, cob, matR, nad9, nad7, nad6, nad5, nad4L, nad4, nad3, nad2, nad1, mttB, ccmFn, ccmFc, ccmB, atp9, atp8, atp6, atp4, atp1 matK, rpoC2, rpoB, rpl2, ndhD, ndhB, ndhA | |
| DYW2B | Zea mays | PPR | DYW | Embryogenesis; Endosperm development | 38 | Mitochondrion Plastid
| rpl16, rps13, rps12_ct, rps12, rps7, rps4, rps3, rps2B, rps2A, cox3, cox2, cob, matR, nad9, nad7, nad6, nad5, nad4L, nad4, nad3, nad2, nad1, mttB, ccmFn, ccmFc, ccmB, atp9, atp8, atp6, atp4, atp1 matK, rpoC2, rpoB, rpl2, ndhD, ndhB, ndhA | |
| ECB2 | Arabidopsis thaliana | PPR | DYW | Leaf color; Seedling cotyledon color; Seedling lethality; Chloroplast development | 6 | Chloroplast
| rpoC1, rpoA, petL, ndhG, ndhF, accD | |
| ECD1 | Arabidopsis thaliana | PPR | DYW | Seedling cotyledon color | 1 | Chloroplast
| rps14 | |
| ELI1 | Arabidopsis thaliana | PPR | DYW | Growth | 1 | Chloroplast Plastid
| ndhB ndhB | |
| EMB2261 | Arabidopsis thaliana | PPR | DYW | Seed development; Seedling development | 1 | Chloroplast Plastid
| rps14 rps14 | |
| EMP17 | Zea mays | PPR | DYW | Seed development | 2 | Mitochondrion
| nad2, ccmFc | |
| EMP18 | Zea mays | PPR | DYW | Mitochondrial biogenesis and seed development | 2 | Mitochondrion
| cox2, atp6 | |
| EMP21 | Zea mays | PPR | DYW | Mitochondrial biogenesis; Seed development | 34 | Mitochondrion
| rps7, rps4, rps3, rps2B, rps2A, rps13, rps12_ct, rps12, rps1, rpl16, nad9, nad7, nad6, nad5, nad4L, nad4, nad3, nad2, nad1, mttB, matR, cox3, cox2, cox1, cob, ccmFn, ccmFc, ccmC, ccmB, atp9, atp8, atp6, atp4, atp1 | |
| EMP5 | Oryza sativa Zea mays | PPR | DYW | Seed development; Seedling growth | 7 | Mitochondrion
| cob, nad1, atp6, rps12, cox3, nad9, rpl16 | |
| EMP7 | Zea mays | PPR | E | Seed lethality | 9 | Mitochondrion
| ccmFc, rps4, nad1, rpl16, rps13, rps12, rps3, matR, ccmFn | |
| EMP80 | Zea mays | PPR | E+ | Seed development | 3 | Mitochondrion
| cox2, atp4, nad7 | |
| EMP9 | Arabidopsis thaliana Zea mays | PPR | E+ | Growth; Seed development; Seed lethality; Seedling lethality; Root development | 2 | Mitochondrion
| ccmB, rps4 | |
| FLO22 | Oryza sativa | PPR | P | Endosperm development; Plant growth | 13 | Mitochondrion
| nad4, nad5, nad7, nad1, orfX, cox2, cox1, nad3, ccb6n, rpl16, rps4, rps7, nad9 | |
| GEND2 | Arabidopsis thaliana | PPR | DYW | Root growth | 3 | Mitochondrion
| orfX, rpsl2, ccmFn-1 | |
| GRS1 | Arabidopsis thaliana | PPR | DYW,E+ | Growth | 4 | Mitochondrion
| rps4, nad6, nad4L, nad1 | |
| HEMC | Arabidopsis thaliana | Porphobilinogen deaminase | NA | Seedling cotyledon color | 10 | Chloroplast
| ndhD, ndhB, rps12, clpP, rpoA, petL, rpl23, rpoC1, ndhF, accD | |
| IPI1 | Nicotiana benthamiana | PPR | DYW | Chloroplast development | 12 | Chloroplast
| rpoA, rps2, rpoC2, rpoB, rpl20, petB, ndhG, ndhD, ndhB, ndhA, atpF, atpA | |
| ISE2 | Arabidopsis thaliana Nicotiana benthamiana | RNA helicaseNA | NA | Development | 6 | Chloroplast
| ndhD, rpoB, rpoA, petL, rps14, clpP | |
| LOI1 | Arabidopsis thaliana | PPR | DYW,NA | Root development; Lovastatin resistance | 4 | Mitochondrion
| NA, cox3, ccmFn2, nad4 | |
| Lon1 | Arabidopsis thaliana | Protease | NA | Growth | 27 | Mitochondrion
| orf25, orfX, matR, rps12, rps4, rps3, rpl16, rpl5, rpl2, atp9, atp1, cox3, cox2, cob, ccb382, ccb203, abci3, abci2, ccmFc, nad9, nad7, nad6, nad5, nad4L, nad4, nad2, nad1 | |
| LPA66 | Arabidopsis thaliana | PPR | DYW | Growth; Leaf color | 1 | Chloroplast Plastid
| psbF psbF | |
| MEF1 | Arabidopsis thaliana | PPR | DYW | Growth | 3 | Mitochondrion
| nad2, rps4, nad7 | |
| MEF10 | Arabidopsis thaliana | PPR | DYW | Growth | 1 | Mitochondrion
| nad2 | |
| MEF100 | Arabidopsis thaliana | PPR | DYW | Growth | 4 | Mitochondrion
| ccmFn2, nad7, nad4, nad1 | |
| MEF11 | Arabidopsis thaliana | PPR | DYW | Leaf temperature; Water stress; Chemical stress sensitivity | 5 | Mitochondrion
| matR, ccmC, ccmFn2, nad4, cox3 | |
| MEF12 | Arabidopsis thaliana | PPR | E,E+ | Growth | 1 | Mitochondrion
| nad5 | |
| MEF13 | Arabidopsis thaliana | PPR | E,E+ | Growth | 6 | Mitochondrion
| nad4, cox3, nad2, ccmFc, nad5, nad7 | |
| MEF14 | Arabidopsis thaliana | PPR | DYW | Growth | 1 | Mitochondrion
| matR | |
| MEF18 | Arabidopsis thaliana | PPR | E | Growth | 1 | Mitochondrion
| nad4 | |
| MEF19 | Arabidopsis thaliana | PPR | E | Growth | 1 | Mitochondrion
| ccmB | |
| MEF20 | Arabidopsis thaliana | PPR | E | Growth | 1 | Mitochondrion
| rps4 | |
| MEF21 | Arabidopsis thaliana | PPR | E+ | Growth | 2 | Mitochondrion
| cox2, cox3 | |
| MEF22 | Arabidopsis thaliana | PPR | DYW | Growth | 1 | Mitochondrion
| nad3 | |
| MEF25 | Arabidopsis thaliana | PPR | E+ | Growth | 1 | Mitochondrion
| nad1 | |
| MEF26 | Arabidopsis thaliana | PPR | DYW | Growth | 2 | Mitochondrion
| nad4, cox3 | |
| MEF28 | Arabidopsis thaliana | PPR | DYW | Growth; Development | 1 | Mitochondrion
| nad2 | |
| MEF29 | Arabidopsis thaliana | PPR | DYW | Development | 2 | Mitochondrion
| cob, nad5 | |
| MEF3 | Arabidopsis thaliana | PPR | E | Growth | 1 | Mitochondrion
| atp4 | |
| MEF31 | Arabidopsis thaliana | PPR | E | NA | 2 | Mitochondrion
| mttB, tatC | |
| MEF32 | Arabidopsis thaliana | PPR | E | Growth | 3 | Mitochondrion
| nad1, cox2, ccmB | |
| MEF35 | Arabidopsis thaliana | PPR | DYW | Growth | 3 | Mitochondrion
| cob, nad4, rpl16 | |
| MEF37 | Arabidopsis thaliana | PPR | E+ | Growth | 49 | Mitochondrion Plastid
| rps7, rps4, rps12, rpl5, rpl2, rpl16, pseudo-rps14, orf240A, nad9, nad7, nad6, nad5, nad3, nad2, nad1, matR, cox3, cox2, cob, ccmFn2, ccmFn1, atp9, atp1, atp4, nad4L, ccmC, mttB, nad4, ccmFc, atp6, rps3, ccmB rps14, rps12, rpoC1, rpoB, rpoA, rpl23, psbZ, psbF, psbE, petL, ndhG, ndhF, ndhD, ndhB, matK, clpP, atpF, accD | |
| MEF46 | Arabidopsis thaliana | PPR | E+ | Growth | 1 | Mitochondrion
| nad5 | |
| MEF47 | Arabidopsis thaliana | PPR | E | Growth | 2 | Mitochondrion
| ccmC, nad3 | |
| MEF57 | Arabidopsis thaliana | PPR | DYW | Growth | 2 | Mitochondrion
| nad9, nad1 | |
| MEF7 | Arabidopsis thaliana | PPR | DYW | Growth | 5 | Mitochondrion
| nad4, nad4L, nad2, cob, ccmB | |
| MEF8 | Arabidopsis thaliana | PPR | DYW | Growth | 23 | Mitochondrion
| nad9, atp8, nad3, ccmB, nad7, rpl16, pseudo-rps14, ccmC, nad2, atp1, rps3, rps12, rpl5, cox3, nad4, ccmFn1, matR, mttB, atp4, cox2, ccmFc, nad6, nad5 | |
| MEF8S | Arabidopsis thaliana | PPR | DYW | NA | 2 | Mitochondrion
| nad6, nad5 | |
| MEF9 | Arabidopsis thaliana | PPR | E | Growth; Flowering | 1 | Mitochondrion
| nad7 | |
| MORF1 | Arabidopsis thaliana | MORF | NA | Viability | 19 | Mitochondrion
| rps4, rps3, rpl5, mttB, nad7, nad6, nad5, nad4, nad2, nad1, matR, cox3, cox2, ccmFc, ccmC, ccmB, ccmFn2, atp9, atp4 | |
| MORF2 | Arabidopsis thaliana | MORF | NA | Leaf color; Growth | 18 | Chloroplast Plastid
| rpoC1, rpl23, rps12, psbZ, rpoA, rps14, rpoB, petL, ndhG, ndhF, matK, accD, clpP, atpF, psbF, psbE, ndhD, ndhB rpoB, psbZ, ndhF, rpoC1, rps12, ndhD, ndhB, clpP | |
| MORF3 | Arabidopsis thaliana | MORF | NA | Growth; Development | 17 | Mitochondrion
| rps4, rps3, rpl5, mttB, nad7, nad5, nad4L, nad3, nad2, nad1, cob, cox3, ccmFc, ccmFn1, ccmB, ccmFn2, atp4 | |
| MORF4 | Arabidopsis thaliana | MORF | NA | NA | 1 | Mitochondrion
| ccmFc | |
| MORF6 | Arabidopsis thaliana | MORF | NA | NA | 1 | Mitochondrion
| nad4 | |
| MORF8 | Arabidopsis thaliana Nicotiana benthamiana | MORF | NA | Plant height Immunity | 29 | Chloroplast Mitochondrion
| ndhF, rpoB, accD, rpoC1, ndhB, ndhD, petL, rps12 ccb206, rps12, rps4, rps3, rpl16, rpl5, rpl2, mttB, orf25, nad7, nad6, nad5, nad4L, nad3, nad2, matR, cox2, cob, ccmFn1, ccmC, ccmB, ccmFn2 | |
| MORF9 | Arabidopsis thaliana Oryza sativa | MORF | NA | Leaf color; Growth; Development; Root development Chloroplast development; Seedling survival | 25 | Chloroplast Plastid
| ycf3, rpoC2, rps8, rpl2, ndhA, atpA, rpl23, rps12, psbZ, rpoA, rps14, rpoB, petL, ndhG, ndhF, matK, accD, clpP, atpF, psbF, ndhD, ndhB ndhG, psbF, ndhB, rps14, rpl23, ndhD, ndhF, rpoA, clpP1, psbE, accD, psbZ, rpoC1, atpF, matK | |
| MPR25 | Arabidopsis thaliana Oryza sativa | PPR | E,E+ | Growth; Leaf color | 1 | Mitochondrion
| nad5 | |
| MREF1 | Arabidopsis thaliana | PPR | E+ | NA | 1 | Mitochondrion
| nad5 | |
| MREF2 | Arabidopsis thaliana | PPR | DYW | NA | 1 | Mitochondrion
| atp1 | |
| NUWA | Arabidopsis thaliana Zea mays | PPR | P | Seed development Embryogenesis; Endosperm development | 44 | Mitochondrion Plastid
| rps13, rps12_ct, rps2B, rps2A, ccmFn, atp9, nad4L, atp8, rps12, atp6, rpl16, rps4, atp4, matR, rps3, ccmC, atp1, nad1, cob, rpl5, nad3, nad2, nad4, mttB, cox3, ccmFc, nad6, ccmB, nad5, nad7, cox2, nad9 matK, rpoC2, rpoB, rpl2, ndhA, rpl23, ndhB, ndhD, rpoA, atpF, clpP, ycf3 | |
| OCP3 | Arabidopsis thaliana | NA | NA | Disease resistance | 2 | Chloroplast
| ndhD, ndhB | |
| OGR1 | Oryza sativa | PPR | DYW | Seed size; Growth; Flowering; Fertility | 5 | Mitochondrion
| cox3, cox2, ccmC, nad4, nad2 | |
| ORRM1 | Arabidopsis thaliana Zea mays | ORRM | NA | Leaf color | 26 | Chloroplast Plastid
| ycf3, rps8, rpoC2, rpl20, rpl2, petB, ndhA, atpA, rps14, rps12, rpoB, rpoA, ndhG, ndhD, ndhB, matK, clpP, accD rps14, rps12, rpoC1, rpoB, rpoA, rpl23, psbZ, psbF, psbE, petL, ndhG, ndhF, ndhD, ndhB, matK, clpP, atpF, accD | |
| ORRM2 | Arabidopsis thaliana Solanum lycopersicum | ORRM | NA | No effect Fruit development | 29 | Mitochondrion
| sdh4, cox1, atp6, atp4, sdh3, rps13, rps10, atp9, atp8, nad3, mttB, rpl5, orf114, nad6, ccmB, rps7, ccmC, pseudo-rps14, nad9, rps4, nad4, nad2, rps3, nad5, nad7, cob, rps12, ccmFc, rpl16 | |
| ORRM3 | Arabidopsis thaliana | ORRM | NA | No effect | 24 | Mitochondrion
| nad3, rpl5, rps7, pseudo-rps14, rpl16, ccmFc, nad2, rps4, nad6, orf114, orf240A, nad1, nad7, rps3, cox2, ccmC, nad9, cob, atp1, nad5, nad4, rps12, ccmB, mttB | |
| ORRM4 | Arabidopsis thaliana Solanum lycopersicum | ORRM | NA | Growth; Flowering; Fruit ripening | 44 | Chloroplast Mitochondrion
| ndhD, rpoA, NA, rpoB, atpA sdh3, rps13, rps10, NA, cox1, ccmFn, atp9, atp6, atp1, sdh4, rps3, rpl2, nad7, nad6, nad5, nad4L, nad4, nad3, nad2, matR, cox2, cob, ccmFn2, ccmFc, ccmC, ccmB, atp8, atp4, rps7, rps4, pseudo-rps14, rps12, rpl5, rpl16, orf240A, orf114, nad9, mttB, cox3, ccmFn1 | |
| ORRM5 | Arabidopsis thaliana | ORRM | NA | Growth; Flowering | 10 | Mitochondrion
| nad3, nad5, nad7, atp1, ccmB, nad4, rps4, ccmFn2, rps3, atp8 | |
| ORRM6 | Arabidopsis thaliana | ORRM | NA | Growth; Plant size; Leaf size; Leaf color | 18 | Chloroplast Plastid
| accD, psbF rpoC1, rpl23, psbZ, psbE, petL, ndhF, atpF, rps14, rps12, rpoB, rpoA, ndhG, ndhD, ndhB, matK, clpP, accD, psbF | |
| OTP71 | Arabidopsis thaliana | PPR | E | Growth | 1 | Mitochondrion
| ccmFn2 | |
| OTP72 | Arabidopsis thaliana | PPR | E,E+ | Growth | 1 | Mitochondrion
| rpl16 | |
| OTP80 | Arabidopsis thaliana | PPR | E,E+ | Growth | 1 | Chloroplast Plastid
| rpl23 rpl23 | |
| OTP81 | Arabidopsis thaliana | PPR | DYW | Growth | 1 | Chloroplast Plastid
| rps12 rps12 | |
| OTP82 | Arabidopsis thaliana | PPR | DYW | Growth | 2 | Chloroplast Plastid
| ndhG, ndhB ndhG, ndhB | |
| OTP84 | Arabidopsis thaliana | PPR | DYW | Growth | 3 | Chloroplast Plastid
| ndhB, psbZ, ndhF psbZ, ndhF, ndhB | |
| OTP85 | Arabidopsis thaliana | PPR | DYW | Growth | 1 | Chloroplast Plastid
| ndhD ndhD | |
| OTP86 | Arabidopsis thaliana | PPR | DYW | Growth | 1 | Chloroplast Plastid
| rps14 rps14 | |
| OTP87 | Arabidopsis thaliana | PPR | E | Plant size; Growth; Development | 2 | Mitochondrion
| atp1, nad7 | |
| OTP90 | Arabidopsis thaliana | PPR | DYW | Growth | 48 | Mitochondrion Plastid
| rps7, rps4, rps3, rps12, rpl5, rpl2, rpl16, pseudo-rps14, orf240A, nad9, nad7, nad6, nad5, nad3, nad2, cox2, cob, ccmFn2, ccmFn1, atp9, atp4, atp1, nad4L, cox3, ccmC, matR, mttB, nad4, ccmFc, nad1, ccmB rps14, rps12, rpoC1, rpoB, rpoA, rpl23, psbZ, psbF, psbE, petL, ndhG, ndhF, ndhD, ndhB, matK, clpP, atpF, accD | |
| OTP970 | Arabidopsis thaliana | PPR | DYW | NA | 1 | Chloroplast
| ndhB | |
| OZ1 | Arabidopsis thaliana | OZ | NA | Leaf color; Development; Growth | 15 | Chloroplast
| accD, matK, clpP, rpoC1, rpoB, ndhF, rpoA, ndhB, rpl23, psbF, rps12, psbZ, ndhG, petL, ndhD | |
| p56 | Nicotiana tabacum | NA | NA | NA | 1 | Chloroplast
| psbE | |
| p70 | Nicotiana tabacum | NA | NA | NA | 1 | Chloroplast
| petB | |
| P95 | Nicotiana tabacum | NA | NA | NA | 2 | Chloroplast
| ndhF, ndhB | |
| PAP2 | Arabidopsis thaliana | NA | NA | Growth | 66 | Chloroplast Mitochondrion
| ycf9, ycf1.2, rps14, rpoC1, rpoB, rpoA, rpl16, rbcL, psbF, psbE, orf31, ndhH, ndhG, ndhF, ndhD, ndhB.1, matK, clpP1, atpF, accD rps7, rps4, rps3, rps12, rpl5, rpl2, rpl16, orfX, orf315, orf313, orf291, orf275, orf262, atp4, orf240A, orf199, orf157, orf131, orf114, orf110A, orf101A, nad9, nad7, nad6, nad5C, nad5A, nad4L, nad4, nad3, nad2B, nad2A, nad1C, nad1B, nad1A, matR, cox3, cox2, cob, ccmFc, ccmFn1, ccmC, ccmB, ccmFn2, atp9, atp8, atp6, atp1 | |
| PCW1 | Zea mays | PPR | DYW | Seed development | 31 | Mitochondrion
| mttB, matR, rpl16, rps13, rps12, rps7, rps4, rps3, rps2B, rps2A, rps1, atp9, atp6, atp4, atp1, cox3, cox2, cox1, cob, ccmFn, ccmFc, ccmB, nad9, nad7, nad6, nad5, nad4L, nad4, nad3, nad2, nad1 | |
| PDM1 | Arabidopsis thaliana | PPR | PLS | Growth | 1 | Plastid
| accD | |
| PDM2 | Arabidopsis thaliana | PPR | P | Growth; Development; Seedling cotyledon color | 5 | Chloroplast
| accD, ndhG, ndhF, ndhD, ndhB | |
| PGL1 | Oryza sativa | PPR | DYW | Development | 2 | Chloroplast Mitochondrion
| ndhD ccmFc | |
| PGL2 | Glycine max | PPR | E+ | Leaf development | 9 | Chloroplast
| rps12, rps18, rps16, rps14, rpoC1, ndhE, ndhD, ndhB, atpF | |
| PGL3A | Oryza sativa | PPR | DYW | Chloroplast development | 2 | Chloroplast
| rpoC2, rps8 | |
| PGN | Arabidopsis thaliana | PPR | E+ | Growth | 48 | Mitochondrion Plastid
| rps7, rps4, rps3, rps12, rpl5, rpl2, rpl16, pseudo-rps14, orf240A, nad9, nad7, nad5, nad4L, nad4, nad3, nad2, nad1, mttB, matR, cox3, cob, ccmFn2, ccmFn1, ccmFc, ccmC, ccmB, atp9, atp4, atp1, cox2, nad6 rps14, rps12, rpoC1, rpoB, rpoA, rpl23, psbZ, psbF, psbE, petL, ndhG, ndhF, ndhD, ndhB, matK, clpP, atpF, accD | |
| POCO1 | Arabidopsis thaliana | PPR | P | Growth; Development | 11 | Mitochondrion
| rps4, rps3, nad7, nad5, nad4, nad2, nad1, mttB, matR, cox3, ccmFc | |
| PPME | Arabidopsis thaliana | PPR | P | Growth | 1 | Mitochondrion
| nad1 | |
| PPO1 | Arabidopsis thaliana | Protoporphyrinogen oxidase | NA | Seedling cotyledon color; Seedling lethality | 7 | Chloroplast
| petL, ndhG, ndhF, rpoC1, rpl23, ndhD, ndhB | |
| PpPPR_45 | Physcomitrium patens | PPR | DYW | Growth; Leaf color | 1 | Chloroplast
| rps14 | |
| PpPPR_56 | Physcomitrium patens | PPR | DYW | Growth | 2 | Mitochondrion
| nad4, nad3 | |
| PpPPR_65 | Physcomitrium patens | PPR | DYW | Growth | 1 | Mitochondrion
| ccmFc | |
| PpPPR_71 | Physcomitrium patens | PPR | DYW | Growth | 1 | Mitochondrion
| ccmFc | |
| PpPPR_77 | Physcomitrium patens | PPR | DYW | Growth | 2 | Mitochondrion
| cox3, cox2 | |
| PpPPR_78 | Physcomitrium patens | PPR | DYW | Growth | 2 | Mitochondrion
| rps14, cox1 | |
| PpPPR_79 | Physcomitrium patens | PPR | DYW | Growth | 1 | Mitochondrion
| nad5 | |
| PpPPR_91 | Physcomitrium patens | PPR | DYW | Growth | 1 | Mitochondrion
| nad5 | |
| PpPPR_98 | Physcomitrium patens | PPR | DYW | No effect | 1 | Mitochondrion
| atp9 | |
| PPR035 | Oryza sativa | PPR | DYW | Drought tolerance | 2 | Mitochondrion
| orfX, rps4 | |
| PPR1 | Arabidopsis thaliana | PPR | P | Stress tolerance | 1 | Mitochondrion
| ccmB | |
| PPR138 | Solanum lycopersicum | PPR | DYW | Chloroplast development | 1 | Plastid
| rpoC1 | |
| PPR16 | Oryza sativa | PPR | DYW | Chloroplast development | 1 | Chloroplast Plastid
| rpoB rpoB | |
| PPR2263 | Zea mays | PPR | DYW | Seed development | 2 | Mitochondrion
| cob, nad5 | |
| PPR26 | Zea mays | PPR | DYW | Chloroplast biogenesis | 8 | Chloroplast
| ndhA, rps8, petB, rpoC2, rpl2, rpl20, ndhF, atpA | |
| PPR27 | Zea mays | PPR | DYW | Seed development | 6 | Mitochondrion
| cox2, nad2, rps13, rps12, rps3, ccmFn | |
| PPR278 | Zea mays | PPR | P | Seed development | 10 | Mitochondrion
| ccmFn, rps12, rps2B, rps2A, rpl16, nad3, cox3, atp8, atp4, atp1 | |
| PPR4 | Glycine max | PPR | DYW | Drought tolerance | 1 | NA
| NA | |
| PPR406 | Oryza sativa | PPR | DYW | Drought tolerance | 1 | Mitochondrion
| orfX | |
| PPR596 | Arabidopsis thaliana | PPR | P | Growth; Flowering; Leaf morphology; Development | 1 | Mitochondrion
| rps3 | |
| PPR6 | Oryza sativa | PPR | DYW | Leaf color; Seedling lethality | 1 | Chloroplast
| ndhB | |
| PPR65 | Physcomitrium patens | PPR | DYW | NA | 1 | Mitochondrion
| ccmFc | |
| PPR674 | Oryza sativa | PPR | E | Development | 1 | Mitochondrion
| ccmC | |
| PPR756 | Oryza sativa | PPR | E | Development | 3 | Mitochondrion
| nad7, ccmC, atp6 | |
| PPR78 | Callicladium imponens Ceratodon purpureus Physcomitrium patens Pseudanomodon attenuatus | PPR | DYW | NA | 3 | Mitochondrion
| ccmFn, rps14, cox1 | |
| PPR79 | Physcomitrium patens | PPR | DYW | Growth | 1 | Mitochondrion
| nad5 | |
| PPRSp1 | Hordeum vulgare | PPR | DYW | Cellular respiration | 1 | Mitochondrion
| nad3 | |
| PPS1 | Oryza sativa | PPR | DYW,NA | Development; Growth; Abiotic stresses | 1 | Mitochondrion
| nad3 | |
| QED1 | Arabidopsis thaliana | PPR | DYW | Growth; Leaf color | 5 | Chloroplast Plastid
| rps12, rpoB, ndhB, matK, accD accD, rpoB, ndhB, matK, rps12 | |
| qKW9 | Zea mays | PPR | DYW | Photosynthesis; Grain filling | 2 | Chloroplast
| NA, ndhB | |
| RARE1 | Arabidopsis thaliana | PPR | DYW | Heat tolerance | 1 | Chloroplast Plastid
| accD accD | |
| RAS | Oryza sativa | PPR | P | Chloroplast development | 3 | Chloroplast
| rps14, ndhA, rpl2 | |
| REME1 | Arabidopsis thaliana | PPR | DYW | Growth | 5 | Mitochondrion
| mttB, rpl5, matR, orfX, nad2 | |
| REME2 | Arabidopsis thaliana | PPR | DYW | Growth | 2 | Mitochondrion
| rps4, rps3 | |
| RF1A | Oryza sativa | PPR | P | Fertility | 1 | Mitochondrion
| atp6 | |
| RID4 | Arabidopsis thaliana | PPR | E+ | Temperature response | 4 | Mitochondrion
| rps4, rps3, rpl5, atp4 | |
| RIP1b | Solanum lycopersicum | MORF | NA | Fruit development | 15 | Chloroplast Mitochondrion
| rpoB atp9, atp6, nad7, ccmFn, ccmB, NA, rps13, rps10, nad9, nad6, nad4, cox1, atp4, atp1 | |
| RPOTp | Arabidopsis thaliana | RNA polymerase | NA | Development | 7 | Chloroplast
| ndhG, ndhF, ndhD, ndhB, ycf3, rps12, rpoC1 | |
| RRD2 | Arabidopsis thaliana | PPR | E+ | Temperature response | 2 | Mitochondrion
| ccb3, ccb2 | |
| SEL1 | Arabidopsis thaliana | PPR | PLS | Leaf color; Seedling lethality | 1 | Chloroplast
| accD | |
| SLC1 | Oryza sativa | PPR | P | Chloroplast development; Seedling survival | 14 | Chloroplast
| ycf3, rps14, rps8, rps2, rpoC2, rpoB, rpl2, ndhG, ndhF, ndhD, ndhB, ndhA, matK, atpA | |
| SLG1 | Arabidopsis thaliana | PPR | E+ | Growth; Development; Abiotic stress | 1 | Mitochondrion
| nad3 | |
| SLO1 | Arabidopsis thaliana | PPR | E,E+ | Growth; Development; Plant size | 2 | Mitochondrion
| nad9, nad4 | |
| SLO2 | Arabidopsis thaliana | PPR | E+ | Growth; Development; Sugar dependence | 5 | Mitochondrion
| nad9, nad1, nad7, mttB, nad4L | |
| SLO4 | Arabidopsis thaliana | PPR | E | Growth; Root development; Flowering | 1 | Mitochondrion
| nad4 | |
| SMK1 | Oryza sativa Zea mays | PPR | E | Seed development; Seedling lethality | 1 | Mitochondrion
| nad7 | |
| SMK4 | Zea mays | PPR | E | Growth | 1 | Mitochondrion
| cox1 | |
| SMK6 | Arabidopsis thaliana Zea mays | PPR | E+ | Growth | 4 | Mitochondrion
| mttB, nad7, nad4L, nad1 | |
| SOP10 | Oryza sativa | PPR | E | Cold tolerance | 10 | Mitochondrion
| rps13, rps2, cox3, rps3, nad5, ccb6c, atp6, rps4, nad6, nad2 | |
| SPL42 | Oryza sativa | Porphobilinogen deaminase | NA | Chloroplast development; Chlorophyll synthesis | 6 | Chloroplast
| rpoC2, rps14, rpoB, ndhF, ndhD, atpA | |
| SSA1 | Oryza sativa | PPR | P | Chloroplast development | 1 | Chloroplast
| ndhB | |
| SST1 | Glycine max | PPR | DYW | Salt tolerance | 3 | Mitochondrion
| atp6-1, nad3, cob | |
| TAD2 | Arabidopsis thaliana | Adenosine deaminase | NA | Growth | 6 | Nucleus
| tRNA-Thr(AGT), tRNA-Arg(ACG), tRNA-Ile(AAT), tRNA-Leu(AAG), tRNA-Ser(AGA), tRNA-Ala(AGC) | |
| TAD3 | Arabidopsis thaliana | Adenosine deaminase | NA | Growth | 6 | Nucleus
| tRNA-Thr(AGT), tRNA-Arg(ACG), tRNA-Ile(AAT), tRNA-Leu(AAG), tRNA-Ser(AGA), tRNA-Ala(AGC) | |
| TADA | Arabidopsis thaliana | Adenosine deaminase | NA | Growth; Leaf color; Leaf morphology | 1 | Chloroplast
| trnR | |
| TRX z | Arabidopsis thaliana Oryza sativa | NA | NA | Chloroplast development; Temperature response | 23 | Chloroplast
| atpF, rpl12, rpoC1, rpoA, rpl23, psbZ, psbF, psbE, petL, matK, clpP, accD, atpA, rps14, ycf3, rps8, rpl2, rpoB, ndhG, ndhF, ndhD, ndhB, ndhA | |
| TSL1 | Arabidopsis thaliana | PPR | P | Leaf development; Chloroplast biogenesis | 3 | Chloroplast
| petL, ndhD, accD | |
| VAC1 | Arabidopsis thaliana | PPR | DYW | Growth | 2 | Chloroplast
| ndhF, accD | |
| WPR | Oryza sativa | PPR | P | Chloroplast development | 6 | Chloroplast
| ycf3, rps14, ndhG, ndhD, ndhB, ndhA | |
| WSL4 | Oryza sativa | PPR | P | Chloroplast biogenesis | 1 | Chloroplast
| rpoB | |
| WSL5 | Oryza sativa | PPR | P | Chloroplast development; Cold tolerance | 2 | Chloroplast
| atpA, rpl2 | |
| WSP1 | Oryza sativa | MORF | NA | Leaf color | 4 | Chloroplast
| ndhD, ndhG, rps14, rpoB | |
| WTG1 | Arabidopsis thaliana | TPR | NA | Plant height; Leaf color; Leaf morphology | 2 | Chloroplast
| ndhG, petL | |
| YGL1d | Gossypium hirsutum | PPR | DYW | Chloroplast development | 2 | Chloroplast
| ndhF, accD | |
| YL | Glycine max | ORRM | NA | Photosynthesis | 23 | Chloroplast
| rps18, rps16, rps14, rps12, rps2, rpoC1, rpoB, rpoA, rpl23, psbL, psbF, psbE, psaI, petB, ndhF, ndhE, ndhD, ndhC, ndhB, ndhA, clpP, atpF, accD | |
| YLWS | Oryza sativa | PPR | P | Chloroplast development | 5 | Chloroplast
| rpoB, ndhF, rps14, ndhB, ndhA | |
| YS1 | Arabidopsis thaliana | PPR | DYW | Leaf color | 1 | Chloroplast Plastid
| rpoB rpoB | |