RiceWiki:TBC

To be curated
Every Gene Has A Story ！

Gene name	RAP ID	MSU ID	Reference Title
OsSUT2	Os12g0641400	LOC_Os12g44380	Wei Siao;Jia-Yi Chen;Hui-Hsin Hsiao;Ping Chung;Shu-Jen Wang Characterization of OsSUT2 Expression and Regulation in Germinating Embryos of Rice Seeds Rice, 2011, 4(2): 39-49
OsSOS1	Os12g0641100	LOC_Os12g44360	Huan Wang;Meishan Zhang;Rui Guo;Decheng Shi;Bao Liu;Xiuyun Lin;Chunwu Yan Effects of salt stress on ion balance and nitrogen metabolism of old and young leaves in rice (Oryza sativa L.)BMC Plant Biology, 2012, 12: 194
OsCCD1	Os12g0640600	LOC_Os12g44310	Andrea Ilg;Qiuju Yu;Patrick Schaub;Peter Beyer;Salim Al-Babili Overexpression of the rice carotenoid cleavage dioxygenase 1 gene in Golden Rice endosperm suggests apocarotenoids as substrates in planta Planta, 2010, 232(3): 691-699
OsPTR2	Os12g0638200	LOC_Os12g44100	Yuge Li;Jie Ouyang;Ya-Yun Wang;Rui Hu;Kuaifei Xia;Jun Duan;Yaqin Wang;Yi-Fang Tsay;Mingyong Zhang Disruption of the rice nitrate transporter OsNPF2.2 hinders root-to-shoot nitrate transport and vascular development Scientific Reports, 2015, 5: 9635
OsbZIP89	Os12g0634500	LOC_Os12g43790	Qian Ji;Liang-sheng Zhang;Yi-fei Wang;Jian Wang Genome-wide analysis of basic leucine zipper transcription factor families in Arabidopsis thaliana, Oryza sativa and Populus trichocarpa Journal of Shanghai University (English Edition), 2009, 13(2): 174-182
Osgr-rbp4	Os12g0632000	LOC_Os12g43600	Chandan Sahi;Manu Agarwal;Amanjot Singha;Anil Grover Molecular characterization of a novel isoform of rice (Oryza sativa L.) glycine rich-RNA binding protein and evidence for its involvement in high temperature stress response Plant Science, 2007, 173(2): 144-155
OsRab5a	Os12g0631100	LOC_Os12g43550	Liuying Wen;Masako Fukuda;Mariko Sunada;Sonoko Ishino;Yoshizumi Ishino;Thomas W. Okita;Masahiro Ogawa;Takashi Ueda;Toshihiro Kumamaru Guanine nucleotide exchange factor 2 for Rab5 proteins coordinated with GLUP6/GEF regulates the intracellular transport of the proglutelin from the Golgi apparatus to the protein storage vacuole in rice endosperm Journal of Experimental Botany, 2015, 66(20): 6137-6147
TOND1	Os12g0630100	LOC_Os12g43440	Yangjun Zhang;Lubin Tan;Zuofeng Zhu;Lixing Yuan;Daoxin Xie;Chuanqing Sun TOND1 confers tolerance to nitrogen deficiency in rice The Plant Journal, 2014,
OsSpo11-4	Os12g0622500	LOC_Os12g42760	Yoshinori Shingu;Takeshi Tokai;Yasuo Agawa;Kentaro Toyota;Selina Ahamed;Makiko Kawagishi-Kobayashi;Akira Komatsu;Tsutomu Mikawa;Masa-Toshi Yamamoto;Kyo Wakasa;Takehiko Shibata;Kohji Kusano The double-stranded break-forming activity of plant SPO11s and a novel rice SPO11 revealed by a Drosophila bioassay BMC Microbiology, 2012, 13: 1
OsYABBY6	Os12g0621100	LOC_Os12g42610	Taiyo Toriba;Kohsuke Harada;Atsushi Takamura;Hidemitsu Nakamura;Hiroaki Ichikawa;Takuya Suzaki;Hiro-Yuki Hirano Molecular characterization the YABBY gene family in Oryza sativa and expression analysis of OsYABBY1 Molecular Genetics and Genomics, 2007, 277(5): 457-468
OsHAP2F	Os12g0618600	LOC_Os12g42400	Thiruvengadam Thirumurugan;Yukihiro Ito;Takahiko Kubo;Akiko Serizawa;Nori Kurata Identification, characterization and interaction of HAP family genes in rice Molecular Genetics and Genomics, 2008, 279(3): 279-289
OsPPKL3	Os12g0617900	LOC_Os12g42310	Xiaojun Zhang;Jianfei Wang;Ji Huang;Hongxia Lan;Cailin Wang;Congfei Yin;Yunyu Wu;Haijuan Tang;Qian Qian;Jiayang Li;Hongsheng Zhang Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice Proceedings of the National Academy of Sciences, 2012, 109(52): 21534-21539
OsNCED5	Os12g0617400	LOC_Os12g42280	Guohui Zhu;Nenghui Ye;Jianhua Zhang Glucose-Induced Delay of Seed Germination in Rice is Mediated by the Suppression of ABA Catabolism Rather Than an Enhancement of ABA Biosynthesis Plant and Cell Physiology, 2009, 50(3): 644-651
OsPCF8	Os12g0616400	LOC_Os12g42190	CHUNHUA YANG;DAYONG LI;DONGHAI MAO;XUE LIU;CHENGJUN JI;XIAOBING LI;XIANFENG ZHAO;ZHUKUAN CHENG;CAIYAN CHEN;LIHUANG ZHU Overexpression of microRNA319 impacts leaf morphogenesis and leads to enhanced cold tolerance in rice (Oryza sativa L.) Plant, Cell & Environment, 2013, 36(12): 2207-2218
OsPID	Os12g0614600	LOC_Os12g42020	Yutaka Morita;Junko Kyozuka Characterization of OsPID, the Rice Ortholog of PINOID, and its Possible Involvement in the Control of Polar Auxin Transport Plant and Cell Physiology, 2007, 48(3): 540-549
OsARF25	Os12g0613700	LOC_Os12g41950	YanHua Qi;SuiKang Wang;ChenJia Shen;SaiNa Zhang;Yue Chen;YanXia Xu;Yu Liu;YunRong Wu;DeAn Jiang OsARF12, a transcription activator on auxin response gene, regulates root elongation and affects iron accumulation in rice (Oryza sativa) New Phytologist, 2012, 193(1): 109-120
OsTRBF2	Os12g0613300	LOC_Os12g41920	Mi Young Byun;Jong-Pil Hong;Woo Taek Kim Identification and characterization of three telomere repeat-binding factors in rice Biochemical and Biophysical Research Communications, 2008, 372(1): 85-90
SDG717	Os12g0613200	LOC_Os12g41900
OsHAP2B	Os12g0613000	LOC_Os12g41880	Thiruvengadam Thirumurugan;Yukihiro Ito;Takahiko Kubo;Akiko Serizawa;Nori Kurata Identification, characterization and interaction of HAP family genes in rice Molecular Genetics and Genomics, 2008, 279(3): 279-289
OSHB3	Os12g0612700	LOC_Os12g41860	Jun-Ichi Itoh;Ken-Ichiro Hibara;Yutaka Sato;Yasuo Nagato Developmental Role and Auxin Responsiveness of Class III Homeodomain Leucine Zipper Gene Family Members in Rice Plant Physiology, 2008, 147(4): 1960-1975
OspPLAIIIζ	Os12g0611300	LOC_Os12g41720	Guangmeng Liu;Ke Zhang;Jun Ai;Xianjun Deng;Yueyun Hong;Xuemin Wang Patatin-related phospholipase A, pPLAIIIα, modulates the longitudinal growth of vegetative tissues and seeds in rice Journal of Experimental Botany, 2015, 66(21): 6945-6955
OMTN3	Os12g0610600	LOC_Os12g41680	Yujie Fang;Kabin Xie;Lizhong Xiong Conserved miR164-targeted NAC genes negatively regulate drought resistance in rice Journal of Experimental Botany, 2014, 65(8): 2119-2135
OsPIL11	Os12g0610200	LOC_Os12g41650	Yuko NAKAMURA;Takahiko KATO;Takafumi YAMASHINO;Masaya MURAKAMI;Takeshi MIZUNO Characterization of a Set of Phytochrome-Interacting Factor-Like bHLH Proteins in Oryza sativa Bioscience, Biotechnology, and Biochemistry, 2007, 71(5): 1183-1191
OsMPS	Os02g0618400	LOC_Os02g40530	Over-expression of OsMPS reduces growth under non-stress conditions, while knockdown plants display increased biomass.
OsCPK10	Os03g0788500	LOC_Os03g57450	Overexpression of this gene in Arabidopsis enhanced the resistance to infection with Pseudomonas syringae pv. tomato, associated with elevated expression of both SA- and JA-related defense genes.
OsALS1	Os03g0755100	LOC_Os03g54790	Encoding a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.
oni3	Os09g0363900	LOC_Os09g19930	This gene is required for avoiding organ fusions in rice.
VYL	Os03g0411500	LOC_Os03g29810	The mutant of this gene produce produces chlorotic leaves throughout the entire growth period.
OsRSS3	Os03g0411500	LOC_Os03g29810	This gene can regulate root cell elongation during adaptation to salinity.
CAP1	Os02g0141300	LOC_Os02g04840	The cap1 heterozygous plant can produce equal numbers of normal and collapsed abnormal grains.
OsAt10	Os06g0594600	LOC_Os06g39390	Overexpression of this gene can alters rice cell wall hydroxycinnamic acid Content and saccharification
ONI1	Os03g0181500	LOC_Os03g08360	This gene is required for correct fatty acid composition and normal shoot development in rice.
Cga1	Os02g0220400	LOC_Os02g12790	This gene can regulates chloroplast development and plant architecture